RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 MBIPQ9NS73 344 aa18.98■□□□□ 0.63
C9orf3-206ENST00000428313 EVC2Q86UK5 1308 aa18.98■□□□□ 0.63
C9orf3-206ENST00000428313 TRIM66O15016 1216 aa18.98■□□□□ 0.63
C9orf3-206ENST00000428313 APBB1O00213 710 aa18.97■□□□□ 0.63
C9orf3-206ENST00000428313 ZNF165P49910 485 aa18.97■□□□□ 0.63
C9orf3-206ENST00000428313 NOM1Q5C9Z4 860 aaKnown RBP18.97■□□□□ 0.63
C9orf3-206ENST00000428313 AFAP1Q8N556 730 aa18.97■□□□□ 0.63
C9orf3-206ENST00000428313 SIRT1Q96EB6 747 aa18.97■□□□□ 0.63
C9orf3-206ENST00000428313 ZFYVE9O95405 1425 aa18.97■□□□□ 0.63
C9orf3-206ENST00000428313 A0A1B0GUL7 405 aa18.97■□□□□ 0.63
C9orf3-206ENST00000428313 ARHGAP29Q52LW3 1261 aa18.97■□□□□ 0.63
C9orf3-206ENST00000428313 AK7Q96M32 723 aa18.97■□□□□ 0.63
C9orf3-206ENST00000428313 CLSTN2Q9H4D0 955 aa18.97■□□□□ 0.63
C9orf3-206ENST00000428313 LCMT1Q9UIC8 334 aa18.97■□□□□ 0.63
C9orf3-206ENST00000428313 TRAK1Q9UPV9 953 aa18.97■□□□□ 0.63
C9orf3-206ENST00000428313 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.97■□□□□ 0.63
C9orf3-206ENST00000428313 RPGRIP1LQ68CZ1 1315 aa18.96■□□□□ 0.63
C9orf3-206ENST00000428313 LOC102724159A0A0B4J2E5 919 aa18.96■□□□□ 0.63
C9orf3-206ENST00000428313 POLR3GO15318 223 aaPredicted RBP18.96■□□□□ 0.63
C9orf3-206ENST00000428313 KRT85P78386 507 aa18.96■□□□□ 0.63
C9orf3-206ENST00000428313 ST5P78524 1137 aa18.96■□□□□ 0.63
C9orf3-206ENST00000428313 PWP2Q15269 919 aaKnown RBP18.96■□□□□ 0.63
C9orf3-206ENST00000428313 RRP15Q9Y3B9 282 aaKnown RBP18.96■□□□□ 0.63
C9orf3-206ENST00000428313 PLEKHG2Q9H7P9 1386 aa18.96■□□□□ 0.63
C9orf3-206ENST00000428313 TPM1P09493 284 aa18.95■□□□□ 0.62
C9orf3-206ENST00000428313 LIG1P18858 919 aa18.95■□□□□ 0.62
C9orf3-206ENST00000428313 C14orf93Q9H972 538 aaKnown RBP18.95■□□□□ 0.62
C9orf3-206ENST00000428313 CPSF1Q10570 1443 aaKnown RBP18.95■□□□□ 0.62
C9orf3-206ENST00000428313 CCDC69A6NI79 296 aa18.95■□□□□ 0.62
C9orf3-206ENST00000428313 SNW1Q13573 536 aaKnown RBP18.95■□□□□ 0.62
C9orf3-206ENST00000428313 EXOC4Q96A65 974 aa18.95■□□□□ 0.62
C9orf3-206ENST00000428313 ORC3Q9UBD5 711 aaPredicted RBP18.95■□□□□ 0.62
C9orf3-206ENST00000428313 MSH6P52701 1360 aa18.95■□□□□ 0.62
C9orf3-206ENST00000428313 CDK12Q9NYV4 1490 aaPredicted RBP18.95■□□□□ 0.62
C9orf3-206ENST00000428313 UGGT1Q9NYU2 1555 aa18.95■□□□□ 0.62
C9orf3-206ENST00000428313 CAMK4Q16566 473 aa18.94■□□□□ 0.62
C9orf3-206ENST00000428313 TTC6Q86TZ1 520 aa18.94■□□□□ 0.62
C9orf3-206ENST00000428313 KIF3BO15066 747 aa18.94■□□□□ 0.62
C9orf3-206ENST00000428313 NPHP1O15259 732 aa18.94■□□□□ 0.62
C9orf3-206ENST00000428313 PRKAR2BP31323 418 aa18.94■□□□□ 0.62
C9orf3-206ENST00000428313 AK2P54819 239 aa18.94■□□□□ 0.62
C9orf3-206ENST00000428313 CKAP2LQ8IYA6 745 aa18.94■□□□□ 0.62
C9orf3-206ENST00000428313 CHMP4CQ96CF2 233 aa18.94■□□□□ 0.62
C9orf3-206ENST00000428313 TTC21AQ8NDW8 1320 aa18.93■□□□□ 0.62
C9orf3-206ENST00000428313 ELL2O00472 640 aaPredicted RBP18.93■□□□□ 0.62
C9orf3-206ENST00000428313 GSDMDP57764 484 aa18.93■□□□□ 0.62
C9orf3-206ENST00000428313 RUFY3Q7L099 469 aa18.93■□□□□ 0.62
C9orf3-206ENST00000428313 C8orf58Q8NAV2 365 aa18.93■□□□□ 0.62
C9orf3-206ENST00000428313 ZNF622Q969S3 477 aaKnown RBP eCLIP18.93■□□□□ 0.62
C9orf3-206ENST00000428313 A0A1W2PP64 1363 aa18.93■□□□□ 0.62
C9orf3-206ENST00000428313 GJB2P29033 226 aa18.93■□□□□ 0.62
C9orf3-206ENST00000428313 OAS2P29728 719 aaKnown RBP18.93■□□□□ 0.62
C9orf3-206ENST00000428313 KCNJ6P48051 423 aa18.93■□□□□ 0.62
C9orf3-206ENST00000428313 GYS2P54840 703 aa18.93■□□□□ 0.62
C9orf3-206ENST00000428313 TMX1Q9H3N1 280 aa18.93■□□□□ 0.62
C9orf3-206ENST00000428313 TRMT1Q9NXH9 659 aaKnown RBP18.93■□□□□ 0.62
C9orf3-206ENST00000428313 DACT1Q9NYF0 836 aa18.93■□□□□ 0.62
C9orf3-206ENST00000428313 EXOC6BQ9Y2D4 811 aa18.93■□□□□ 0.62
C9orf3-206ENST00000428313 JRKLQ9Y4A0 524 aa18.93■□□□□ 0.62
C9orf3-206ENST00000428313 SRRTQ9BXP5 876 aaKnown RBP18.92■□□□□ 0.62
C9orf3-206ENST00000428313 NPHP3Q7Z494 1330 aa18.92■□□□□ 0.62
C9orf3-206ENST00000428313 ARHGEF28Q8N1W1 1705 aaKnown RBP18.92■□□□□ 0.62
C9orf3-206ENST00000428313 GOLGA6L19H0YKK7 550 aa18.91■□□□□ 0.62
C9orf3-206ENST00000428313 IVLP07476 585 aa18.91■□□□□ 0.62
C9orf3-206ENST00000428313 HAP1P54257 671 aaPredicted RBP18.91■□□□□ 0.62
C9orf3-206ENST00000428313 ARID5BQ14865 1188 aa18.91■□□□□ 0.62
C9orf3-206ENST00000428313 TTC31Q49AM3 519 aaPredicted RBP18.91■□□□□ 0.62
C9orf3-206ENST00000428313 ADGRL3Q9HAR2 1447 aa18.91■□□□□ 0.62
C9orf3-206ENST00000428313 AOX1Q06278 1338 aa18.91■□□□□ 0.62
C9orf3-206ENST00000428313 FRMPD1Q5SYB0 1578 aa18.91■□□□□ 0.62
C9orf3-206ENST00000428313 YTHDC2Q9H6S0 1430 aaKnown RBP18.91■□□□□ 0.62
C9orf3-206ENST00000428313 PSDA5PKW4 1024 aaPredicted RBP18.91■□□□□ 0.62
C9orf3-206ENST00000428313 CASTP20810 708 aaKnown RBP18.91■□□□□ 0.62
C9orf3-206ENST00000428313 MAGEA9P43362 315 aa18.91■□□□□ 0.62
C9orf3-206ENST00000428313 IQCB1Q15051 598 aa18.91■□□□□ 0.62
C9orf3-206ENST00000428313 UBXN4Q92575 508 aa18.91■□□□□ 0.62
C9orf3-206ENST00000428313 DNAJC25Q9H1X3 360 aa18.91■□□□□ 0.62
C9orf3-206ENST00000428313 STAP2Q9UGK3 403 aa18.91■□□□□ 0.62
C9orf3-206ENST00000428313 REXO1L1PQ8IX06 675 aa18.9■□□□□ 0.62
C9orf3-206ENST00000428313 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.9■□□□□ 0.62
C9orf3-206ENST00000428313 ZSCAN31Q96LW9 406 aaPredicted RBP18.9■□□□□ 0.62
C9orf3-206ENST00000428313 SCAND2PQ9GZW5 306 aaPredicted RBP18.9■□□□□ 0.62
C9orf3-206ENST00000428313 GGNBP2Q9H3C7 697 aa18.9■□□□□ 0.62
C9orf3-206ENST00000428313 SH2B1Q9NRF2 756 aaPredicted RBP18.9■□□□□ 0.62
C9orf3-206ENST00000428313 SLC52A1Q9NWF4 448 aa18.9■□□□□ 0.62
C9orf3-206ENST00000428313 SNX14Q9Y5W7 946 aa18.9■□□□□ 0.62
C9orf3-206ENST00000428313 LMOD3Q0VAK6 560 aa18.9■□□□□ 0.62
C9orf3-206ENST00000428313 CCDC158Q5M9N0 1113 aa18.9■□□□□ 0.62
C9orf3-206ENST00000428313 ACTN2P35609 894 aa18.89■□□□□ 0.61
C9orf3-206ENST00000428313 SMC1AQ14683 1233 aaKnown RBP18.89■□□□□ 0.61
C9orf3-206ENST00000428313 LRRN4CLQ8ND94 238 aa18.89■□□□□ 0.61
C9orf3-206ENST00000428313 RILPL2Q969X0 211 aa18.89■□□□□ 0.61
C9orf3-206ENST00000428313 MEIS3Q99687 375 aa18.89■□□□□ 0.61
C9orf3-206ENST00000428313 THUMPD2Q9BTF0 503 aaKnown RBP18.89■□□□□ 0.61
C9orf3-206ENST00000428313 TBC1D8O95759 1140 aa18.89■□□□□ 0.61
C9orf3-206ENST00000428313 APPP05067 770 aa18.89■□□□□ 0.61
C9orf3-206ENST00000428313 ATP2B1P20020 1258 aa18.89■□□□□ 0.61
C9orf3-206ENST00000428313 DHX8Q14562 1220 aaKnown RBP18.89■□□□□ 0.61
C9orf3-206ENST00000428313 OSBPL5Q9H0X9 879 aaPredicted RBP18.89■□□□□ 0.61
C9orf3-206ENST00000428313 DLG5Q8TDM6 1919 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms