RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 CCDC191Q8NCU4 936 aa15.31■□□□□ 0.04
SPG11-202ENST00000427534 UIMC1Q96RL1 719 aa15.31■□□□□ 0.04
SPG11-202ENST00000427534 SERPINA10Q9UK55 444 aa15.31■□□□□ 0.04
SPG11-202ENST00000427534 GRIN2AQ12879 1464 aa15.3■□□□□ 0.04
SPG11-202ENST00000427534 DESP17661 470 aa15.3■□□□□ 0.04
SPG11-202ENST00000427534 TFIP11Q9UBB9 837 aaKnown RBP15.3■□□□□ 0.04
SPG11-202ENST00000427534 FAM170AA1A519 330 aa15.3■□□□□ 0.04
SPG11-202ENST00000427534 IDEP14735 1019 aa15.3■□□□□ 0.04
SPG11-202ENST00000427534 DNAAF4Q8WXU2 420 aa15.3■□□□□ 0.04
SPG11-202ENST00000427534 KIF1BPQ96EK5 621 aa15.3■□□□□ 0.04
SPG11-202ENST00000427534 LAMC3Q9Y6N6 1575 aa15.3■□□□□ 0.04
SPG11-202ENST00000427534 ADGRL1O94910 1474 aa15.3■□□□□ 0.04
SPG11-202ENST00000427534 SYCP3Q8IZU3 236 aa15.3■□□□□ 0.04
SPG11-202ENST00000427534 SSH1Q8WYL5 1049 aa15.3■□□□□ 0.04
SPG11-202ENST00000427534 PKD2L1Q9P0L9 805 aa15.3■□□□□ 0.04
SPG11-202ENST00000427534 EPB41L2O43491 1005 aaKnown RBP15.29■□□□□ 0.04
SPG11-202ENST00000427534 FERMT2Q96AC1 680 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 NCOA1Q15788 1441 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 MYO1BO43795 1136 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 PRKCSHP14314 528 aaPredicted RBP15.29■□□□□ 0.04
SPG11-202ENST00000427534 IQCA1Q86XH1 822 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 CCDC112Q8NEF3 446 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 ZRANB1Q9UGI0 708 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
SPG11-202ENST00000427534 KIF14Q15058 1648 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 NCKAP5LQ9HCH0 1330 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 ERICH4A6NGS2 130 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 RARSP54136 660 aaKnown RBP15.29■□□□□ 0.04
SPG11-202ENST00000427534 MAP3K9P80192 1104 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 ERCC4Q92889 916 aaPredicted RBP15.29■□□□□ 0.04
SPG11-202ENST00000427534 C8orf76Q96K31 380 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 ZNF287Q9HBT7 754 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 TMEM67Q5HYA8 995 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 TCEANC2Q96MN5 208 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 CABP5Q9NP86 173 aa15.29■□□□□ 0.04
SPG11-202ENST00000427534 CCDC102AQ96A19 550 aa15.28■□□□□ 0.04
SPG11-202ENST00000427534 SETDB2Q96T68 719 aa15.28■□□□□ 0.04
SPG11-202ENST00000427534 SLC26A6Q9BXS9 759 aa15.28■□□□□ 0.04
SPG11-202ENST00000427534 KAT14Q9H8E8 782 aa15.28■□□□□ 0.04
SPG11-202ENST00000427534 CCDC194A0A1B0GVG4 234 aa15.28■□□□□ 0.04
SPG11-202ENST00000427534 TRIM21P19474 475 aaKnown RBP15.28■□□□□ 0.04
SPG11-202ENST00000427534 TDRD12Q587J7 1177 aaKnown RBP15.28■□□□□ 0.04
SPG11-202ENST00000427534 TAF4BQ92750 862 aa15.28■□□□□ 0.04
SPG11-202ENST00000427534 PRPF4BQ13523 1007 aaKnown RBP15.28■□□□□ 0.04
SPG11-202ENST00000427534 UBE4AQ14139 1066 aa15.28■□□□□ 0.04
SPG11-202ENST00000427534 PUS7Q96PZ0 661 aaKnown RBP15.28■□□□□ 0.04
SPG11-202ENST00000427534 WASF1Q92558 559 aa15.28■□□□□ 0.04
SPG11-202ENST00000427534 CATIPQ7Z7H3 387 aa15.28■□□□□ 0.04
SPG11-202ENST00000427534 CWC25Q9NXE8 425 aaPredicted RBP15.28■□□□□ 0.04
SPG11-202ENST00000427534 PI4KAP2A4QPH2 592 aa15.27■□□□□ 0.03
SPG11-202ENST00000427534 ALDH1L2Q3SY69 923 aa15.27■□□□□ 0.03
SPG11-202ENST00000427534 CHST3Q7LGC8 479 aa15.27■□□□□ 0.03
SPG11-202ENST00000427534 PI4KAP1Q8N8J0 262 aa15.27■□□□□ 0.03
SPG11-202ENST00000427534 NIP7Q9Y221 180 aaKnown RBP eCLIP15.27■□□□□ 0.03
SPG11-202ENST00000427534 TSG101Q99816 390 aa15.27■□□□□ 0.03
SPG11-202ENST00000427534 CHPF2Q9P2E5 772 aa15.27■□□□□ 0.03
SPG11-202ENST00000427534 WASLO00401 505 aaPredicted RBP15.27■□□□□ 0.03
SPG11-202ENST00000427534 PRC1O43663 620 aa15.27■□□□□ 0.03
SPG11-202ENST00000427534 IDI1Q13907 227 aa15.27■□□□□ 0.03
SPG11-202ENST00000427534 ZRSR2Q15696 482 aaKnown RBP15.27■□□□□ 0.03
SPG11-202ENST00000427534 TRMT1Q9NXH9 659 aaKnown RBP15.27■□□□□ 0.03
SPG11-202ENST00000427534 RAB11FIP3O75154 756 aa15.26■□□□□ 0.03
SPG11-202ENST00000427534 POTEJP0CG39 1038 aa15.26■□□□□ 0.03
SPG11-202ENST00000427534 CFAP45Q9UL16 551 aa15.26■□□□□ 0.03
SPG11-202ENST00000427534 CEP131Q9UPN4 1083 aa15.26■□□□□ 0.03
SPG11-202ENST00000427534 PPP1R12BO60237 982 aaPredicted RBP15.26■□□□□ 0.03
SPG11-202ENST00000427534 ABCC11Q96J66 1382 aa15.26■□□□□ 0.03
SPG11-202ENST00000427534 GJC1P36383 396 aa15.26■□□□□ 0.03
SPG11-202ENST00000427534 DDX17Q92841 729 aaKnown RBP15.26■□□□□ 0.03
SPG11-202ENST00000427534 LUC7LQ9NQ29 371 aaKnown RBP15.26■□□□□ 0.03
SPG11-202ENST00000427534 ACEP12821 1306 aa15.26■□□□□ 0.03
SPG11-202ENST00000427534 CTNNA2P26232 953 aa15.26■□□□□ 0.03
SPG11-202ENST00000427534 TSPY3P0CV98 308 aa15.26■□□□□ 0.03
SPG11-202ENST00000427534 TSPY8P0CW00 308 aa15.26■□□□□ 0.03
SPG11-202ENST00000427534 JAKMIP3Q5VZ66 844 aa15.26■□□□□ 0.03
SPG11-202ENST00000427534 HEATR3Q7Z4Q2 680 aa15.26■□□□□ 0.03
SPG11-202ENST00000427534 MIGA1Q8NAN2 632 aa15.26■□□□□ 0.03
SPG11-202ENST00000427534 CCDC150Q8NCX0 1101 aa15.26■□□□□ 0.03
SPG11-202ENST00000427534 NUP88Q99567 741 aaPredicted RBP15.26■□□□□ 0.03
SPG11-202ENST00000427534 ANKRD18AQ8IVF6 992 aa15.25■□□□□ 0.03
SPG11-202ENST00000427534 IL27Q8NEV9 243 aa15.25■□□□□ 0.03
SPG11-202ENST00000427534 SAP30BPQ9UHR5 308 aaKnown RBP15.25■□□□□ 0.03
SPG11-202ENST00000427534 ZNF397Q8NF99 534 aaPredicted RBP15.25■□□□□ 0.03
SPG11-202ENST00000427534 CALM1P0DP23 149 aa15.25■□□□□ 0.03
SPG11-202ENST00000427534 CALM2P0DP24 149 aa15.25■□□□□ 0.03
SPG11-202ENST00000427534 CALM3P0DP25 149 aa15.25■□□□□ 0.03
SPG11-202ENST00000427534 ATP2B3Q16720 1220 aa15.25■□□□□ 0.03
SPG11-202ENST00000427534 ZSCAN31Q96LW9 406 aaPredicted RBP15.24■□□□□ 0.03
SPG11-202ENST00000427534 PPP1R42Q7Z4L9 355 aa15.24■□□□□ 0.03
SPG11-202ENST00000427534 IFNL2Q8IZJ0 200 aa15.24■□□□□ 0.03
SPG11-202ENST00000427534 NKTRP30414 1462 aaKnown RBP15.24■□□□□ 0.03
SPG11-202ENST00000427534 BICRAQ9NZM4 1560 aa15.24■□□□□ 0.03
SPG11-202ENST00000427534 GSTTP1A0A1W2PQM5 241 aa15.24■□□□□ 0.03
SPG11-202ENST00000427534 CYP7A1P22680 504 aa15.24■□□□□ 0.03
SPG11-202ENST00000427534 TMEM266Q2M3C6 531 aa15.24■□□□□ 0.03
SPG11-202ENST00000427534 CBFA2T2O43439 604 aa15.24■□□□□ 0.03
SPG11-202ENST00000427534 HLA-DOAP06340 250 aa15.24■□□□□ 0.03
SPG11-202ENST00000427534 AMOTQ4VCS5 1084 aa15.24■□□□□ 0.03
SPG11-202ENST00000427534 ARHGAP29Q52LW3 1261 aa15.24■□□□□ 0.03
SPG11-202ENST00000427534 LEKR1Q6ZMV7 388 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms