RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 TBC1D9BQ66K14 1250 aa12.84□□□□□ -0.35
LSG1-202ENST00000427461 PRR5LQ6MZQ0 368 aa12.84□□□□□ -0.35
LSG1-202ENST00000427461 ZNF530Q6P9A1 599 aaPredicted RBP12.84□□□□□ -0.35
LSG1-202ENST00000427461 BRIP1Q9BX63 1249 aa12.84□□□□□ -0.35
LSG1-202ENST00000427461 ZNF277Q9NRM2 450 aaPredicted RBP12.84□□□□□ -0.35
LSG1-202ENST00000427461 TLL2Q9Y6L7 1015 aa12.84□□□□□ -0.35
LSG1-202ENST00000427461 ST20-MTHFSA0A0A6YYL1 179 aa12.83□□□□□ -0.36
LSG1-202ENST00000427461 MTHFSP49914 203 aa12.83□□□□□ -0.36
LSG1-202ENST00000427461 EIF4A2Q14240 407 aaKnown RBP12.83□□□□□ -0.36
LSG1-202ENST00000427461 ARFGEF2Q9Y6D5 1785 aa12.83□□□□□ -0.36
LSG1-202ENST00000427461 CA12O43570 354 aa12.82□□□□□ -0.36
LSG1-202ENST00000427461 CIAPIN1Q6FI81 312 aa12.82□□□□□ -0.36
LSG1-202ENST00000427461 OLFM4Q6UX06 510 aa12.82□□□□□ -0.36
LSG1-202ENST00000427461 CNKSR1Q969H4 720 aa12.82□□□□□ -0.36
LSG1-202ENST00000427461 PLEKHO1Q53GL0 409 aaPredicted RBP12.81□□□□□ -0.36
LSG1-202ENST00000427461 ZIC5Q96T25 663 aa12.81□□□□□ -0.36
LSG1-202ENST00000427461 PDZRN3Q9UPQ7 1066 aa12.81□□□□□ -0.36
LSG1-202ENST00000427461 SRGNP10124 158 aa12.8□□□□□ -0.36
LSG1-202ENST00000427461 CANXP27824 592 aaKnown RBP12.8□□□□□ -0.36
LSG1-202ENST00000427461 BRPF1P55201 1214 aaPredicted RBP12.8□□□□□ -0.36
LSG1-202ENST00000427461 SOGA3Q5TF21 947 aa12.8□□□□□ -0.36
LSG1-202ENST00000427461 STYK1Q6J9G0 422 aa12.8□□□□□ -0.36
LSG1-202ENST00000427461 C7orf43Q8WVR3 580 aa12.8□□□□□ -0.36
LSG1-202ENST00000427461 FZD9O00144 591 aa12.79□□□□□ -0.36
LSG1-202ENST00000427461 FKBP4Q02790 459 aaKnown RBP eCLIP12.79□□□□□ -0.36
LSG1-202ENST00000427461 SLC39A6Q13433 755 aa12.79□□□□□ -0.36
LSG1-202ENST00000427461 CCDC93Q567U6 631 aa12.79□□□□□ -0.36
LSG1-202ENST00000427461 SAPCD2Q86UD0 394 aa12.79□□□□□ -0.36
LSG1-202ENST00000427461 CARD14Q9BXL6 1004 aa12.79□□□□□ -0.36
LSG1-202ENST00000427461 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
LSG1-202ENST00000427461 GJA3Q9Y6H8 435 aa12.79□□□□□ -0.36
LSG1-202ENST00000427461 EPS15P42566 896 aa12.78□□□□□ -0.36
LSG1-202ENST00000427461 GPC2Q8N158 579 aa12.78□□□□□ -0.36
LSG1-202ENST00000427461 MASTLQ96GX5 879 aa12.78□□□□□ -0.36
LSG1-202ENST00000427461 SCN11AQ9UI33 1791 aa12.78□□□□□ -0.36
LSG1-202ENST00000427461 HABP4Q5JVS0 413 aaKnown RBP12.77□□□□□ -0.37
LSG1-202ENST00000427461 C1orf141Q5JVX7 400 aa12.77□□□□□ -0.37
LSG1-202ENST00000427461 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
LSG1-202ENST00000427461 CELF2O95319 508 aaKnown RBP12.76□□□□□ -0.37
LSG1-202ENST00000427461 IARSP41252 1262 aaKnown RBP12.76□□□□□ -0.37
LSG1-202ENST00000427461 SCNN1DP51172 638 aa12.76□□□□□ -0.37
LSG1-202ENST00000427461 AEBP1Q8IUX7 1158 aa12.76□□□□□ -0.37
LSG1-202ENST00000427461 CNBD1Q8NA66 436 aa12.76□□□□□ -0.37
LSG1-202ENST00000427461 TBC1D2BQ9UPU7 963 aa12.76□□□□□ -0.37
LSG1-202ENST00000427461 COL4A5P29400 1685 aa12.76□□□□□ -0.37
LSG1-202ENST00000427461 SCN7AQ01118 1682 aa12.76□□□□□ -0.37
LSG1-202ENST00000427461 NPHP1O15259 732 aa12.75□□□□□ -0.37
LSG1-202ENST00000427461 EIF5P55010 431 aaKnown RBP12.75□□□□□ -0.37
LSG1-202ENST00000427461 AMOTQ4VCS5 1084 aa12.75□□□□□ -0.37
LSG1-202ENST00000427461 SYNE4Q8N205 404 aa12.75□□□□□ -0.37
LSG1-202ENST00000427461 LMOD1P29536 600 aaPredicted RBP12.74□□□□□ -0.37
LSG1-202ENST00000427461 TNNT2P45379 298 aaPredicted RBP12.74□□□□□ -0.37
LSG1-202ENST00000427461 GCC1Q96CN9 775 aa12.74□□□□□ -0.37
LSG1-202ENST00000427461 ZNF408Q9H9D4 720 aa12.74□□□□□ -0.37
LSG1-202ENST00000427461 LGR6Q9HBX8 967 aa12.74□□□□□ -0.37
LSG1-202ENST00000427461 ST5P78524 1137 aa12.73□□□□□ -0.37
LSG1-202ENST00000427461 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
LSG1-202ENST00000427461 GLIS2Q9BZE0 524 aaPredicted RBP12.73□□□□□ -0.37
LSG1-202ENST00000427461 SLC52A2Q9HAB3 445 aa12.73□□□□□ -0.37
LSG1-202ENST00000427461 ZNF330Q9Y3S2 320 aaPredicted RBP12.73□□□□□ -0.37
LSG1-202ENST00000427461 BCORQ6W2J9 1755 aa12.73□□□□□ -0.37
LSG1-202ENST00000427461 USP50Q70EL3 339 aaPredicted RBP12.72□□□□□ -0.37
LSG1-202ENST00000427461 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
LSG1-202ENST00000427461 SETDB2Q96T68 719 aa12.72□□□□□ -0.37
LSG1-202ENST00000427461 A0A087WZG4 1122 aa12.71□□□□□ -0.37
LSG1-202ENST00000427461 EIF6P56537 245 aaKnown RBP12.71□□□□□ -0.37
LSG1-202ENST00000427461 RTKN2Q8IZC4 609 aa12.71□□□□□ -0.37
LSG1-202ENST00000427461 JDP2Q8WYK2 163 aa12.71□□□□□ -0.37
LSG1-202ENST00000427461 HPS5Q9UPZ3 1129 aa12.71□□□□□ -0.37
LSG1-202ENST00000427461 TRPA1O75762 1119 aa12.7□□□□□ -0.38
LSG1-202ENST00000427461 NPR1P16066 1061 aa12.7□□□□□ -0.38
LSG1-202ENST00000427461 NOGQ13253 232 aa12.7□□□□□ -0.38
LSG1-202ENST00000427461 FXR1P51114 621 aaKnown RBP eCLIP12.69□□□□□ -0.38
LSG1-202ENST00000427461 DLK2Q6UY11 383 aa12.69□□□□□ -0.38
LSG1-202ENST00000427461 CTU1Q7Z7A3 348 aaKnown RBP12.69□□□□□ -0.38
LSG1-202ENST00000427461 MKI67P46013 3256 aaKnown RBP12.69□□□□□ -0.38
LSG1-202ENST00000427461 SNED1Q8TER0 1413 aa12.69□□□□□ -0.38
LSG1-202ENST00000427461 CAMTA2O94983 1202 aa12.68□□□□□ -0.38
LSG1-202ENST00000427461 SLC51AQ86UW1 340 aa12.68□□□□□ -0.38
LSG1-202ENST00000427461 VSIG10Q8N0Z9 540 aa12.68□□□□□ -0.38
LSG1-202ENST00000427461 RNF186Q9NXI6 227 aa12.68□□□□□ -0.38
LSG1-202ENST00000427461 UBR2Q8IWV8 1755 aa12.68□□□□□ -0.38
LSG1-202ENST00000427461 MRC1P22897 1456 aa12.67□□□□□ -0.38
LSG1-202ENST00000427461 FAM155AB1AL88 458 aaPredicted RBP12.67□□□□□ -0.38
LSG1-202ENST00000427461 RNMTO43148 476 aaKnown RBP12.67□□□□□ -0.38
LSG1-202ENST00000427461 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
LSG1-202ENST00000427461 STARD3NLO95772 234 aa12.67□□□□□ -0.38
LSG1-202ENST00000427461 HUNKP57058 714 aa12.67□□□□□ -0.38
LSG1-202ENST00000427461 KIF23Q02241 960 aaPredicted RBP12.67□□□□□ -0.38
LSG1-202ENST00000427461 AKAP4Q5JQC9 854 aa12.67□□□□□ -0.38
LSG1-202ENST00000427461 SULT6B1Q6IMI4 303 aa12.67□□□□□ -0.38
LSG1-202ENST00000427461 ADARB2Q9NS39 739 aaKnown RBP12.67□□□□□ -0.38
LSG1-202ENST00000427461 SAGE1Q9NXZ1 904 aa12.67□□□□□ -0.38
LSG1-202ENST00000427461 AKAP11Q9UKA4 1901 aa12.66□□□□□ -0.38
LSG1-202ENST00000427461 KLRG2A4D1S0 409 aaPredicted RBP12.66□□□□□ -0.38
LSG1-202ENST00000427461 NBPF5PQ86XG9 351 aaPredicted RBP12.66□□□□□ -0.38
LSG1-202ENST00000427461 PSMD1Q99460 953 aa12.66□□□□□ -0.38
LSG1-202ENST00000427461 GPRC5DQ9NZD1 345 aa12.66□□□□□ -0.38
LSG1-202ENST00000427461 DLL1O00548 723 aa12.65□□□□□ -0.38
LSG1-202ENST00000427461 A1BGP04217 495 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms