RNA–Protein interactions for RNA: ENST00000426712.1

COPS6-204, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 716 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-204ENST00000426712 CNKSR1Q969H4 720 aa11.88□□□□□ -0.51
COPS6-204ENST00000426712 KLRG2A4D1S0 409 aaPredicted RBP11.87□□□□□ -0.51
COPS6-204ENST00000426712 HTATSF1O43719 755 aaKnown RBP11.87□□□□□ -0.51
COPS6-204ENST00000426712 DZIP3Q86Y13 1208 aaKnown RBP11.87□□□□□ -0.51
COPS6-204ENST00000426712 CCDC24Q8N4L8 307 aa11.87□□□□□ -0.51
COPS6-204ENST00000426712 MASTLQ96GX5 879 aa11.87□□□□□ -0.51
COPS6-204ENST00000426712 CFAP53Q96M91 514 aa11.87□□□□□ -0.51
COPS6-204ENST00000426712 PRAMEF22A3QJZ6 481 aa11.86□□□□□ -0.51
COPS6-204ENST00000426712 SNRPA1P09661 255 aaKnown RBP11.86□□□□□ -0.51
COPS6-204ENST00000426712 ERFEQ4G0M1 354 aa11.86□□□□□ -0.51
COPS6-204ENST00000426712 CNBD1Q8NA66 436 aa11.86□□□□□ -0.51
COPS6-204ENST00000426712 NUDCQ9Y266 331 aa11.86□□□□□ -0.51
COPS6-204ENST00000426712 NBPF26B4DH59 902 aa11.85□□□□□ -0.51
COPS6-204ENST00000426712 PPP2R1AP30153 589 aa11.85□□□□□ -0.51
COPS6-204ENST00000426712 ST5P78524 1137 aa11.85□□□□□ -0.51
COPS6-204ENST00000426712 COL13A1Q5TAT6 717 aaPredicted RBP11.85□□□□□ -0.51
COPS6-204ENST00000426712 SOGA3Q5TF21 947 aa11.85□□□□□ -0.51
COPS6-204ENST00000426712 NBPF10Q6P3W6 841 aaKnown RBP11.85□□□□□ -0.51
COPS6-204ENST00000426712 NPM2Q86SE8 214 aaKnown RBP11.85□□□□□ -0.51
COPS6-204ENST00000426712 NBPF15Q8N660 670 aa11.85□□□□□ -0.51
COPS6-204ENST00000426712 ZNF330Q9Y3S2 320 aaPredicted RBP11.85□□□□□ -0.51
COPS6-204ENST00000426712 CNGB1Q14028 1251 aaPredicted RBP11.84□□□□□ -0.51
COPS6-204ENST00000426712 TAF7Q15545 349 aaPredicted RBP11.84□□□□□ -0.51
COPS6-204ENST00000426712 PRPF40BQ6NWY9 871 aaKnown RBP11.84□□□□□ -0.51
COPS6-204ENST00000426712 MCM10Q7L590 875 aa11.84□□□□□ -0.51
COPS6-204ENST00000426712 TAOK3Q9H2K8 898 aa11.84□□□□□ -0.51
COPS6-204ENST00000426712 LAMB4A4D0S4 1761 aa11.83□□□□□ -0.52
COPS6-204ENST00000426712 KDM3BQ7LBC6 1761 aa11.83□□□□□ -0.52
COPS6-204ENST00000426712 U2AF1L5P0DN76 240 aaPredicted RBP11.83□□□□□ -0.52
COPS6-204ENST00000426712 PIP4K2AP48426 406 aaPredicted RBP11.83□□□□□ -0.52
COPS6-204ENST00000426712 U2AF1Q01081 240 aaKnown RBP eCLIP11.83□□□□□ -0.52
COPS6-204ENST00000426712 TPTE2Q6XPS3 522 aa11.83□□□□□ -0.52
COPS6-204ENST00000426712 RTF1Q92541 710 aaKnown RBP11.83□□□□□ -0.52
COPS6-204ENST00000426712 ZNF219Q9P2Y4 722 aaPredicted RBP11.83□□□□□ -0.52
COPS6-204ENST00000426712 DDNO94850 711 aaPredicted RBP11.82□□□□□ -0.52
COPS6-204ENST00000426712 NPR1P16066 1061 aa11.82□□□□□ -0.52
COPS6-204ENST00000426712 DCTN1Q14203 1278 aa11.82□□□□□ -0.52
COPS6-204ENST00000426712 NBPF5PQ86XG9 351 aaPredicted RBP11.82□□□□□ -0.52
COPS6-204ENST00000426712 L3MBTL3Q96JM7 780 aaPredicted RBP11.82□□□□□ -0.52
COPS6-204ENST00000426712 ZNF652Q9Y2D9 606 aa11.82□□□□□ -0.52
COPS6-204ENST00000426712 CHADLQ6NUI6 762 aa11.81□□□□□ -0.52
COPS6-204ENST00000426712 ERVV-1B6SEH8 477 aa11.8□□□□□ -0.52
COPS6-204ENST00000426712 NPHP1O15259 732 aa11.8□□□□□ -0.52
COPS6-204ENST00000426712 FKBP4Q02790 459 aaKnown RBP eCLIP11.8□□□□□ -0.52
COPS6-204ENST00000426712 HLFQ16534 295 aa11.8□□□□□ -0.52
COPS6-204ENST00000426712 CCDC93Q567U6 631 aa11.8□□□□□ -0.52
COPS6-204ENST00000426712 RTKN2Q8IZC4 609 aa11.8□□□□□ -0.52
COPS6-204ENST00000426712 PLEKHF1Q96S99 279 aa11.8□□□□□ -0.52
COPS6-204ENST00000426712 CREBZFQ9NS37 354 aa11.8□□□□□ -0.52
COPS6-204ENST00000426712 NIP7Q9Y221 180 aaKnown RBP eCLIP11.8□□□□□ -0.52
COPS6-204ENST00000426712 ADAMTSL1Q8N6G6 1762 aa11.79□□□□□ -0.52
COPS6-204ENST00000426712 POTEIP0CG38 1075 aa11.79□□□□□ -0.52
COPS6-204ENST00000426712 POTEJP0CG39 1038 aa11.79□□□□□ -0.52
COPS6-204ENST00000426712 ALDH1B1P30837 517 aa11.79□□□□□ -0.52
COPS6-204ENST00000426712 PASKQ96RG2 1323 aa11.79□□□□□ -0.52
COPS6-204ENST00000426712 SNED1Q8TER0 1413 aa11.78□□□□□ -0.52
COPS6-204ENST00000426712 IQCA1LA6NCM1 817 aa11.78□□□□□ -0.52
COPS6-204ENST00000426712 FZD9O00144 591 aa11.78□□□□□ -0.52
COPS6-204ENST00000426712 ITGBL1O95965 494 aaPredicted RBP11.78□□□□□ -0.52
COPS6-204ENST00000426712 HSPA1AP0DMV8 641 aaKnown RBP11.78□□□□□ -0.52
COPS6-204ENST00000426712 HSPA1BP0DMV9 641 aaKnown RBP11.78□□□□□ -0.52
COPS6-204ENST00000426712 CRY2Q49AN0 593 aa11.78□□□□□ -0.52
COPS6-204ENST00000426712 LDHDQ86WU2 507 aa11.78□□□□□ -0.52
COPS6-204ENST00000426712 TAF1DQ9H5J8 278 aaPredicted RBP11.78□□□□□ -0.52
COPS6-204ENST00000426712 MIS18AQ9NYP9 233 aa11.78□□□□□ -0.52
COPS6-204ENST00000426712 EIF4A1P60842 406 aaKnown RBP11.77□□□□□ -0.53
COPS6-204ENST00000426712 SYNE4Q8N205 404 aa11.77□□□□□ -0.53
COPS6-204ENST00000426712 PNISRQ8TF01 805 aaKnown RBP11.77□□□□□ -0.53
COPS6-204ENST00000426712 ZNF277Q9NRM2 450 aaPredicted RBP11.77□□□□□ -0.53
COPS6-204ENST00000426712 TRPM7Q96QT4 1865 aa11.76□□□□□ -0.53
COPS6-204ENST00000426712 HOXA10P31260 410 aaPredicted RBP11.76□□□□□ -0.53
COPS6-204ENST00000426712 OLFM4Q6UX06 510 aa11.76□□□□□ -0.53
COPS6-204ENST00000426712 NYXQ9GZU5 481 aa11.76□□□□□ -0.53
COPS6-204ENST00000426712 MAP3K15Q6ZN16 1313 aa11.76□□□□□ -0.53
COPS6-204ENST00000426712 IARSP41252 1262 aaKnown RBP11.75□□□□□ -0.53
COPS6-204ENST00000426712 CC2D2BQ6DHV5 1058 aa11.75□□□□□ -0.53
COPS6-204ENST00000426712 TNS4Q8IZW8 715 aa11.75□□□□□ -0.53
COPS6-204ENST00000426712 PSMD1Q99460 953 aa11.75□□□□□ -0.53
COPS6-204ENST00000426712 ZNF541Q9H0D2 1346 aa11.75□□□□□ -0.53
COPS6-204ENST00000426712 RIC1Q4ADV7 1423 aa11.75□□□□□ -0.53
COPS6-204ENST00000426712 ANKRD36CQ5JPF3 1778 aa11.74□□□□□ -0.53
COPS6-204ENST00000426712 FAM177BA6PVY3 158 aa11.74□□□□□ -0.53
COPS6-204ENST00000426712 NFE2L2Q16236 605 aa11.74□□□□□ -0.53
COPS6-204ENST00000426712 GRIPAP1Q4V328 841 aa11.74□□□□□ -0.53
COPS6-204ENST00000426712 TTLL7Q6ZT98 887 aa11.74□□□□□ -0.53
COPS6-204ENST00000426712 ZNF34Q8IZ26 560 aa11.74□□□□□ -0.53
COPS6-204ENST00000426712 HACL1Q9UJ83 578 aa11.74□□□□□ -0.53
COPS6-204ENST00000426712 CNTNAP1P78357 1384 aa11.74□□□□□ -0.53
COPS6-204ENST00000426712 IBTKQ9P2D0 1353 aaPredicted RBP11.74□□□□□ -0.53
COPS6-204ENST00000426712 LAMB2P55268 1798 aa11.74□□□□□ -0.53
COPS6-204ENST00000426712 TMEM88BA6NKF7 163 aa11.73□□□□□ -0.53
COPS6-204ENST00000426712 GTF2E1P29083 439 aaPredicted RBP11.73□□□□□ -0.53
COPS6-204ENST00000426712 EPHX2P34913 555 aa11.73□□□□□ -0.53
COPS6-204ENST00000426712 SUSD4Q5VX71 490 aa11.73□□□□□ -0.53
COPS6-204ENST00000426712 GIGYF2Q6Y7W6 1299 aaKnown RBP11.73□□□□□ -0.53
COPS6-204ENST00000426712 LRP10Q7Z4F1 713 aa11.73□□□□□ -0.53
COPS6-204ENST00000426712 PNMA8AQ86V59 439 aaPredicted RBP11.73□□□□□ -0.53
COPS6-204ENST00000426712 NUTM1Q86Y26 1132 aa11.73□□□□□ -0.53
COPS6-204ENST00000426712 GPC2Q8N158 579 aa11.73□□□□□ -0.53
COPS6-204ENST00000426712 CRAMP1Q96RY5 1269 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms