RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 DDX10Q13206 875 aaKnown RBP26.47■■□□□ 1.83
CCDC107-206ENST00000426546 PRR5LQ6MZQ0 368 aa26.47■■□□□ 1.83
CCDC107-206ENST00000426546 CLEC4GQ6UXB4 293 aa26.47■■□□□ 1.83
CCDC107-206ENST00000426546 SMC1BQ8NDV3 1235 aa26.47■■□□□ 1.83
CCDC107-206ENST00000426546 RGL2O15211 777 aa26.46■■□□□ 1.83
CCDC107-206ENST00000426546 MIS18AQ9NYP9 233 aa26.46■■□□□ 1.83
CCDC107-206ENST00000426546 GLTPD2A6NH11 291 aa26.45■■□□□ 1.82
CCDC107-206ENST00000426546 PDE6BP35913 854 aa26.45■■□□□ 1.82
CCDC107-206ENST00000426546 ZEB1P37275 1124 aaPredicted RBP26.45■■□□□ 1.82
CCDC107-206ENST00000426546 CNBD1Q8NA66 436 aa26.45■■□□□ 1.82
CCDC107-206ENST00000426546 ZNF652Q9Y2D9 606 aa26.45■■□□□ 1.82
CCDC107-206ENST00000426546 TIAM2Q8IVF5 1701 aa26.45■■□□□ 1.82
CCDC107-206ENST00000426546 CCDC88AQ3V6T2 1871 aa26.45■■□□□ 1.82
CCDC107-206ENST00000426546 MYBBP1AQ9BQG0 1328 aaKnown RBP26.44■■□□□ 1.82
CCDC107-206ENST00000426546 NBPF26B4DH59 902 aa26.44■■□□□ 1.82
CCDC107-206ENST00000426546 NFKBIEO00221 500 aa26.44■■□□□ 1.82
CCDC107-206ENST00000426546 NBPF10Q6P3W6 841 aaKnown RBP26.44■■□□□ 1.82
CCDC107-206ENST00000426546 NBPF15Q8N660 670 aa26.44■■□□□ 1.82
CCDC107-206ENST00000426546 VEGFAP15692 232 aaPredicted RBP26.42■■□□□ 1.82
CCDC107-206ENST00000426546 THUMPD2Q9BTF0 503 aaKnown RBP26.42■■□□□ 1.82
CCDC107-206ENST00000426546 NPHP1O15259 732 aa26.41■■□□□ 1.82
CCDC107-206ENST00000426546 EIF4A1P60842 406 aaKnown RBP26.41■■□□□ 1.82
CCDC107-206ENST00000426546 ST5P78524 1137 aa26.41■■□□□ 1.82
CCDC107-206ENST00000426546 ARFGEF2Q9Y6D5 1785 aa26.41■■□□□ 1.82
CCDC107-206ENST00000426546 CCDC24Q8N4L8 307 aa26.39■■□□□ 1.82
CCDC107-206ENST00000426546 COL13A1Q5TAT6 717 aaPredicted RBP26.38■■□□□ 1.81
CCDC107-206ENST00000426546 ZNF622Q969S3 477 aaKnown RBP eCLIP26.38■■□□□ 1.81
CCDC107-206ENST00000426546 CACNA1SQ13698 1873 aa26.38■■□□□ 1.81
CCDC107-206ENST00000426546 FER1L6Q2WGJ9 1857 aa26.37■■□□□ 1.81
CCDC107-206ENST00000426546 NBPF5PQ86XG9 351 aaPredicted RBP26.37■■□□□ 1.81
CCDC107-206ENST00000426546 POTECB2RU33 542 aa26.36■■□□□ 1.81
CCDC107-206ENST00000426546 RIPK4P57078 832 aa26.36■■□□□ 1.81
CCDC107-206ENST00000426546 NUP98P52948 1817 aa26.36■■□□□ 1.81
CCDC107-206ENST00000426546 C21orf2O43822 256 aa26.35■■□□□ 1.81
CCDC107-206ENST00000426546 SRGNP10124 158 aa26.35■■□□□ 1.81
CCDC107-206ENST00000426546 TMPOP42166 694 aaKnown RBP26.35■■□□□ 1.81
CCDC107-206ENST00000426546 LMOD3Q0VAK6 560 aa26.35■■□□□ 1.81
CCDC107-206ENST00000426546 STYK1Q6J9G0 422 aa26.35■■□□□ 1.81
CCDC107-206ENST00000426546 NIP7Q9Y221 180 aaKnown RBP eCLIP26.35■■□□□ 1.81
CCDC107-206ENST00000426546 SLX4Q8IY92 1834 aa26.35■■□□□ 1.81
CCDC107-206ENST00000426546 DICER1Q9UPY3 1922 aaKnown RBP26.34■■□□□ 1.81
CCDC107-206ENST00000426546 BABAM1Q9NWV8 329 aa26.34■■□□□ 1.81
CCDC107-206ENST00000426546 TSPYL4Q9UJ04 414 aa26.34■■□□□ 1.81
CCDC107-206ENST00000426546 PCNTO95613 3336 aa26.34■■□□□ 1.81
CCDC107-206ENST00000426546 TPTE2Q6XPS3 522 aa26.33■■□□□ 1.81
CCDC107-206ENST00000426546 CNKSR1Q969H4 720 aa26.33■■□□□ 1.81
CCDC107-206ENST00000426546 MASTLQ96GX5 879 aa26.33■■□□□ 1.81
CCDC107-206ENST00000426546 ZNF219Q9P2Y4 722 aaPredicted RBP26.33■■□□□ 1.81
CCDC107-206ENST00000426546 ERVV-1B6SEH8 477 aa26.32■■□□□ 1.8
CCDC107-206ENST00000426546 HLFQ16534 295 aa26.32■■□□□ 1.8
CCDC107-206ENST00000426546 DPY19L2Q6NUT2 758 aa26.32■■□□□ 1.8
CCDC107-206ENST00000426546 ERBB4Q15303 1308 aa26.32■■□□□ 1.8
CCDC107-206ENST00000426546 RRP7AQ9Y3A4 280 aaKnown RBP26.31■■□□□ 1.8
CCDC107-206ENST00000426546 MAP3K15Q6ZN16 1313 aa26.31■■□□□ 1.8
CCDC107-206ENST00000426546 KLRG2A4D1S0 409 aaPredicted RBP26.3■■□□□ 1.8
CCDC107-206ENST00000426546 WDR43Q15061 677 aaKnown RBP eCLIP26.3■■□□□ 1.8
CCDC107-206ENST00000426546 ERFEQ4G0M1 354 aa26.3■■□□□ 1.8
CCDC107-206ENST00000426546 PRPF40BQ6NWY9 871 aaKnown RBP26.3■■□□□ 1.8
CCDC107-206ENST00000426546 LTBP3Q9NS15 1303 aa26.3■■□□□ 1.8
CCDC107-206ENST00000426546 KIF6Q6ZMV9 814 aa26.29■■□□□ 1.8
CCDC107-206ENST00000426546 NGEFQ8N5V2 710 aa26.29■■□□□ 1.8
CCDC107-206ENST00000426546 MYL6BP14649 208 aa26.28■■□□□ 1.8
CCDC107-206ENST00000426546 SOGA3Q5TF21 947 aa26.28■■□□□ 1.8
CCDC107-206ENST00000426546 NPR1P16066 1061 aa26.27■■□□□ 1.8
CCDC107-206ENST00000426546 TTLL7Q6ZT98 887 aa26.27■■□□□ 1.8
CCDC107-206ENST00000426546 CCDC146Q8IYE0 955 aa26.27■■□□□ 1.8
CCDC107-206ENST00000426546 RUNDC1Q96C34 613 aa26.27■■□□□ 1.8
CCDC107-206ENST00000426546 TAOK3Q9H2K8 898 aa26.27■■□□□ 1.8
CCDC107-206ENST00000426546 PRKRIP1Q9H875 184 aaPredicted RBP26.27■■□□□ 1.8
CCDC107-206ENST00000426546 NYXQ9GZU5 481 aa26.26■■□□□ 1.79
CCDC107-206ENST00000426546 FAM177BA6PVY3 158 aa26.25■■□□□ 1.79
CCDC107-206ENST00000426546 IBTKQ9P2D0 1353 aaPredicted RBP26.24■■□□□ 1.79
CCDC107-206ENST00000426546 RIC1Q4ADV7 1423 aa26.23■■□□□ 1.79
CCDC107-206ENST00000426546 HSPA1AP0DMV8 641 aaKnown RBP26.23■■□□□ 1.79
CCDC107-206ENST00000426546 HSPA1BP0DMV9 641 aaKnown RBP26.23■■□□□ 1.79
CCDC107-206ENST00000426546 GTF2E1P29083 439 aaPredicted RBP26.23■■□□□ 1.79
CCDC107-206ENST00000426546 ZBTB3Q9H5J0 574 aa26.23■■□□□ 1.79
CCDC107-206ENST00000426546 DDNO94850 711 aaPredicted RBP26.22■■□□□ 1.79
CCDC107-206ENST00000426546 NEUROD2Q15784 382 aa26.22■■□□□ 1.79
CCDC107-206ENST00000426546 LRP10Q7Z4F1 713 aa26.22■■□□□ 1.79
CCDC107-206ENST00000426546 TNS4Q8IZW8 715 aa26.22■■□□□ 1.79
CCDC107-206ENST00000426546 C7orf43Q8WVR3 580 aa26.22■■□□□ 1.79
CCDC107-206ENST00000426546 ADAMTS8Q9UP79 889 aa26.22■■□□□ 1.79
CCDC107-206ENST00000426546 PDIA6Q15084 440 aa26.21■■□□□ 1.79
CCDC107-206ENST00000426546 GIGYF2Q6Y7W6 1299 aaKnown RBP26.21■■□□□ 1.79
CCDC107-206ENST00000426546 TRIM35Q9UPQ4 493 aa26.21■■□□□ 1.79
CCDC107-206ENST00000426546 ABCC12Q96J65 1359 aa26.2■■□□□ 1.79
CCDC107-206ENST00000426546 UBN2Q6ZU65 1347 aa26.2■■□□□ 1.79
CCDC107-206ENST00000426546 CHL1O00533 1208 aa26.2■■□□□ 1.78
CCDC107-206ENST00000426546 POTEIP0CG38 1075 aa26.2■■□□□ 1.78
CCDC107-206ENST00000426546 POTEJP0CG39 1038 aa26.2■■□□□ 1.78
CCDC107-206ENST00000426546 EIF2S2P20042 333 aaKnown RBP26.2■■□□□ 1.78
CCDC107-206ENST00000426546 CCDC93Q567U6 631 aa26.2■■□□□ 1.78
CCDC107-206ENST00000426546 CHADLQ6NUI6 762 aa26.2■■□□□ 1.78
CCDC107-206ENST00000426546 CRY2Q49AN0 593 aa26.19■■□□□ 1.78
CCDC107-206ENST00000426546 ZNF34Q8IZ26 560 aa26.19■■□□□ 1.78
CCDC107-206ENST00000426546 ANKRD36CQ5JPF3 1778 aa26.18■■□□□ 1.78
CCDC107-206ENST00000426546 GPTP24298 496 aa26.18■■□□□ 1.78
CCDC107-206ENST00000426546 ALDH1B1P30837 517 aa26.18■■□□□ 1.78
CCDC107-206ENST00000426546 NUTM1Q86Y26 1132 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms