RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 KIF20AO95235 890 aa20.75■□□□□ 0.91
ARHGEF28-203ENST00000426542 ARHGEF11O15085 1522 aa20.75■□□□□ 0.91
ARHGEF28-203ENST00000426542 MTIF2P46199 727 aaKnown RBP20.75■□□□□ 0.91
ARHGEF28-203ENST00000426542 BCCIPQ9P287 314 aaKnown RBP eCLIP20.75■□□□□ 0.91
ARHGEF28-203ENST00000426542 FLIIQ13045 1269 aa20.75■□□□□ 0.91
ARHGEF28-203ENST00000426542 BIN1O00499 593 aa20.74■□□□□ 0.91
ARHGEF28-203ENST00000426542 MCM3P25205 808 aa20.74■□□□□ 0.91
ARHGEF28-203ENST00000426542 SLC4A8Q2Y0W8 1093 aa20.74■□□□□ 0.91
ARHGEF28-203ENST00000426542 TMEM67Q5HYA8 995 aa20.74■□□□□ 0.91
ARHGEF28-203ENST00000426542 VAT1LQ9HCJ6 419 aa20.74■□□□□ 0.91
ARHGEF28-203ENST00000426542 CALML4Q96GE6 196 aa20.74■□□□□ 0.91
ARHGEF28-203ENST00000426542 FOXO3O43524 673 aa20.74■□□□□ 0.91
ARHGEF28-203ENST00000426542 MYCNP04198 464 aaPredicted RBP20.74■□□□□ 0.91
ARHGEF28-203ENST00000426542 TNPO1Q92973 898 aaKnown RBP20.74■□□□□ 0.91
ARHGEF28-203ENST00000426542 GOLGA6L10A0A0M3HER8 536 aa20.74■□□□□ 0.91
ARHGEF28-203ENST00000426542 C6orf229H3BNL8 230 aa20.74■□□□□ 0.91
ARHGEF28-203ENST00000426542 USP25Q9UHP3 1055 aa20.74■□□□□ 0.91
ARHGEF28-203ENST00000426542 PAFAH1B1P43034 410 aa20.73■□□□□ 0.91
ARHGEF28-203ENST00000426542 TTF1Q15361 905 aaPredicted RBP20.73■□□□□ 0.91
ARHGEF28-203ENST00000426542 TFIP11Q9UBB9 837 aaKnown RBP20.73■□□□□ 0.91
ARHGEF28-203ENST00000426542 FAM135AQ9P2D6 1515 aa20.73■□□□□ 0.91
ARHGEF28-203ENST00000426542 TRMT1LQ7Z2T5 733 aaKnown RBP20.73■□□□□ 0.91
ARHGEF28-203ENST00000426542 GDPD2Q9HCC8 539 aa20.73■□□□□ 0.91
ARHGEF28-203ENST00000426542 USP16Q9Y5T5 823 aa20.73■□□□□ 0.91
ARHGEF28-203ENST00000426542 TOPBP1Q92547 1522 aa20.73■□□□□ 0.91
ARHGEF28-203ENST00000426542 TRIM27P14373 513 aa20.72■□□□□ 0.91
ARHGEF28-203ENST00000426542 SPTY2D1Q68D10 685 aaPredicted RBP20.72■□□□□ 0.91
ARHGEF28-203ENST00000426542 TMC6Q7Z403 805 aa20.72■□□□□ 0.91
ARHGEF28-203ENST00000426542 SNRKQ9NRH2 765 aa20.72■□□□□ 0.91
ARHGEF28-203ENST00000426542 AMOTL2Q9Y2J4 779 aa20.72■□□□□ 0.91
ARHGEF28-203ENST00000426542 WASLO00401 505 aaPredicted RBP20.72■□□□□ 0.91
ARHGEF28-203ENST00000426542 HAND2P61296 217 aa20.72■□□□□ 0.91
ARHGEF28-203ENST00000426542 ECHDC1Q9NTX5 307 aa20.72■□□□□ 0.91
ARHGEF28-203ENST00000426542 DDX19AQ9NUU7 478 aaKnown RBP20.72■□□□□ 0.91
ARHGEF28-203ENST00000426542 ATP5J2-PTCD1G3V325 749 aa20.72■□□□□ 0.91
ARHGEF28-203ENST00000426542 CCDC40Q4G0X9 1142 aa20.72■□□□□ 0.91
ARHGEF28-203ENST00000426542 RAB11FIP4Q86YS3 637 aa20.72■□□□□ 0.91
ARHGEF28-203ENST00000426542 WDHD1O75717 1129 aaPredicted RBP20.71■□□□□ 0.91
ARHGEF28-203ENST00000426542 IARSP41252 1262 aaKnown RBP20.71■□□□□ 0.91
ARHGEF28-203ENST00000426542 STX1AQ16623 288 aa20.71■□□□□ 0.91
ARHGEF28-203ENST00000426542 KAT14Q9H8E8 782 aa20.71■□□□□ 0.91
ARHGEF28-203ENST00000426542 CWC25Q9NXE8 425 aaPredicted RBP20.71■□□□□ 0.91
ARHGEF28-203ENST00000426542 CCDC12Q8WUD4 166 aaPredicted RBP20.71■□□□□ 0.91
ARHGEF28-203ENST00000426542 TBC1D2Q9BYX2 928 aa20.71■□□□□ 0.91
ARHGEF28-203ENST00000426542 TCP11L1Q9NUJ3 509 aa20.71■□□□□ 0.91
ARHGEF28-203ENST00000426542 AMPD3Q01432 767 aa20.71■□□□□ 0.91
ARHGEF28-203ENST00000426542 TCERG1LQ5VWI1 586 aa20.71■□□□□ 0.91
ARHGEF28-203ENST00000426542 PANK2Q9BZ23 570 aa20.71■□□□□ 0.91
ARHGEF28-203ENST00000426542 EXOC5O00471 708 aa20.71■□□□□ 0.91
ARHGEF28-203ENST00000426542 FERMT2Q96AC1 680 aa20.71■□□□□ 0.91
ARHGEF28-203ENST00000426542 CTNNA2P26232 953 aa20.7■□□□□ 0.9
ARHGEF28-203ENST00000426542 LDHAL6AQ6ZMR3 332 aa20.7■□□□□ 0.9
ARHGEF28-203ENST00000426542 NAIPQ13075 1403 aa20.7■□□□□ 0.9
ARHGEF28-203ENST00000426542 TSPY2A6NKD2 308 aa20.7■□□□□ 0.9
ARHGEF28-203ENST00000426542 GCOM1H8Y6P7 765 aaPredicted RBP20.7■□□□□ 0.9
ARHGEF28-203ENST00000426542 MYZAPP0CAP1 466 aa20.7■□□□□ 0.9
ARHGEF28-203ENST00000426542 KIF5BP33176 963 aa20.7■□□□□ 0.9
ARHGEF28-203ENST00000426542 HOOK3Q86VS8 718 aa20.7■□□□□ 0.9
ARHGEF28-203ENST00000426542 STX6O43752 255 aa20.7■□□□□ 0.9
ARHGEF28-203ENST00000426542 ISM2Q6H9L7 571 aa20.7■□□□□ 0.9
ARHGEF28-203ENST00000426542 IDEP14735 1019 aa20.7■□□□□ 0.9
ARHGEF28-203ENST00000426542 TBC1D9Q6ZT07 1266 aa20.7■□□□□ 0.9
ARHGEF28-203ENST00000426542 CAMSAP2Q08AD1 1489 aa20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 PPFIA3O75145 1194 aa20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 METAP2P50579 478 aaKnown RBP eCLIP20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 LRPPRCP42704 1394 aaKnown RBP20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 TMCO5BA8MYB1 307 aa20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 CBX1P83916 185 aa20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 MFSD6Q6ZSS7 791 aa20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 MICU3Q86XE3 530 aa20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 ALS2CR12Q96Q35 445 aa20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 FEZ1Q99689 392 aa20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 PDE4BQ07343 736 aa20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 CETN1Q12798 172 aa20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 TSHZ3Q63HK5 1081 aa20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 CDC5LQ99459 802 aaKnown RBP20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 UBE4AQ14139 1066 aa20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 SLC26A6Q9BXS9 759 aa20.69■□□□□ 0.9
ARHGEF28-203ENST00000426542 TOP2BQ02880 1626 aa20.68■□□□□ 0.9
ARHGEF28-203ENST00000426542 C16orf45Q96MC5 204 aaPredicted RBP20.68■□□□□ 0.9
ARHGEF28-203ENST00000426542 NEK1Q96PY6 1258 aa20.68■□□□□ 0.9
ARHGEF28-203ENST00000426542 PRXQ9BXM0 1461 aa20.67■□□□□ 0.9
ARHGEF28-203ENST00000426542 JARID2Q92833 1246 aaPredicted RBP20.67■□□□□ 0.9
ARHGEF28-203ENST00000426542 ORC3Q9UBD5 711 aaPredicted RBP20.67■□□□□ 0.9
ARHGEF28-203ENST00000426542 RRP9O43818 475 aaKnown RBP20.67■□□□□ 0.9
ARHGEF28-203ENST00000426542 PPM1FP49593 454 aaPredicted RBP20.67■□□□□ 0.9
ARHGEF28-203ENST00000426542 DDX46Q7L014 1031 aaKnown RBP20.67■□□□□ 0.9
ARHGEF28-203ENST00000426542 NCOA7Q8NI08 942 aa20.67■□□□□ 0.9
ARHGEF28-203ENST00000426542 ADGRF5Q8IZF2 1346 aa20.67■□□□□ 0.9
ARHGEF28-203ENST00000426542 PAXIP1Q6ZW49 1069 aaPredicted RBP20.67■□□□□ 0.9
ARHGEF28-203ENST00000426542 SYCP3Q8IZU3 236 aa20.67■□□□□ 0.9
ARHGEF28-203ENST00000426542 BAG3O95817 575 aa20.67■□□□□ 0.9
ARHGEF28-203ENST00000426542 GSDMDP57764 484 aa20.67■□□□□ 0.9
ARHGEF28-203ENST00000426542 CGNQ9P2M7 1197 aaKnown RBP20.67■□□□□ 0.9
ARHGEF28-203ENST00000426542 POLR3GO15318 223 aaPredicted RBP20.66■□□□□ 0.9
ARHGEF28-203ENST00000426542 PRC1O43663 620 aa20.66■□□□□ 0.9
ARHGEF28-203ENST00000426542 LDHCP07864 332 aa20.66■□□□□ 0.9
ARHGEF28-203ENST00000426542 PRPF4BQ13523 1007 aaKnown RBP20.66■□□□□ 0.9
ARHGEF28-203ENST00000426542 HLTFQ14527 1009 aaKnown RBP eCLIP20.66■□□□□ 0.9
ARHGEF28-203ENST00000426542 PPP1R42Q7Z4L9 355 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms