RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 RTF1Q92541 710 aaKnown RBP13.4□□□□□ -0.26
GACAT3-201ENST00000426539 RRAGCQ9HB90 399 aa13.4□□□□□ -0.26
GACAT3-201ENST00000426539 ANKRD31Q8N7Z5 1873 aa13.4□□□□□ -0.26
GACAT3-201ENST00000426539 KDM2BQ8NHM5 1336 aa13.39□□□□□ -0.27
GACAT3-201ENST00000426539 LMNB1P20700 586 aa13.39□□□□□ -0.27
GACAT3-201ENST00000426539 APLP1P51693 650 aa13.39□□□□□ -0.27
GACAT3-201ENST00000426539 DNAJC5GQ8N7S2 189 aa13.39□□□□□ -0.27
GACAT3-201ENST00000426539 SETDB2Q96T68 719 aa13.39□□□□□ -0.27
GACAT3-201ENST00000426539 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
GACAT3-201ENST00000426539 SBF1O95248 1867 aa13.39□□□□□ -0.27
GACAT3-201ENST00000426539 PDE6BP35913 854 aa13.38□□□□□ -0.27
GACAT3-201ENST00000426539 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
GACAT3-201ENST00000426539 ZNF622Q969S3 477 aaKnown RBP eCLIP13.38□□□□□ -0.27
GACAT3-201ENST00000426539 PLEKHF1Q96S99 279 aa13.38□□□□□ -0.27
GACAT3-201ENST00000426539 ZC3H4Q9UPT8 1303 aaKnown RBP13.38□□□□□ -0.27
GACAT3-201ENST00000426539 COL11A2P13942 1736 aaPredicted RBP13.37□□□□□ -0.27
GACAT3-201ENST00000426539 C21orf2O43822 256 aa13.37□□□□□ -0.27
GACAT3-201ENST00000426539 TAF7Q15545 349 aaPredicted RBP13.37□□□□□ -0.27
GACAT3-201ENST00000426539 PDZRN3Q9UPQ7 1066 aa13.37□□□□□ -0.27
GACAT3-201ENST00000426539 BCORQ6W2J9 1755 aa13.36□□□□□ -0.27
GACAT3-201ENST00000426539 GLTPD2A6NH11 291 aa13.36□□□□□ -0.27
GACAT3-201ENST00000426539 SRGNP10124 158 aa13.36□□□□□ -0.27
GACAT3-201ENST00000426539 HTRA3P83110 453 aa13.36□□□□□ -0.27
GACAT3-201ENST00000426539 FSTL1Q12841 308 aa13.36□□□□□ -0.27
GACAT3-201ENST00000426539 CLEC4GQ6UXB4 293 aa13.36□□□□□ -0.27
GACAT3-201ENST00000426539 NPM2Q86SE8 214 aaKnown RBP13.36□□□□□ -0.27
GACAT3-201ENST00000426539 C16orf71Q8IYS4 520 aaPredicted RBP13.36□□□□□ -0.27
GACAT3-201ENST00000426539 STYK1Q6J9G0 422 aa13.35□□□□□ -0.27
GACAT3-201ENST00000426539 THUMPD2Q9BTF0 503 aaKnown RBP13.35□□□□□ -0.27
GACAT3-201ENST00000426539 POTECB2RU33 542 aa13.34□□□□□ -0.27
GACAT3-201ENST00000426539 ST5P78524 1137 aa13.34□□□□□ -0.27
GACAT3-201ENST00000426539 HLFQ16534 295 aa13.34□□□□□ -0.27
GACAT3-201ENST00000426539 PRPF40BQ6NWY9 871 aaKnown RBP13.34□□□□□ -0.27
GACAT3-201ENST00000426539 NBPF5PQ86XG9 351 aaPredicted RBP13.34□□□□□ -0.27
GACAT3-201ENST00000426539 KLRG2A4D1S0 409 aaPredicted RBP13.33□□□□□ -0.28
GACAT3-201ENST00000426539 RGL2O15211 777 aa13.33□□□□□ -0.28
GACAT3-201ENST00000426539 EIF4A1P60842 406 aaKnown RBP13.33□□□□□ -0.28
GACAT3-201ENST00000426539 NFE2L2Q16236 605 aa13.33□□□□□ -0.28
GACAT3-201ENST00000426539 C7orf43Q8WVR3 580 aa13.33□□□□□ -0.28
GACAT3-201ENST00000426539 CNKSR1Q969H4 720 aa13.33□□□□□ -0.28
GACAT3-201ENST00000426539 MASTLQ96GX5 879 aa13.33□□□□□ -0.28
GACAT3-201ENST00000426539 NIP7Q9Y221 180 aaKnown RBP eCLIP13.33□□□□□ -0.28
GACAT3-201ENST00000426539 ZNF652Q9Y2D9 606 aa13.33□□□□□ -0.28
GACAT3-201ENST00000426539 TNRC6CQ9HCJ0 1690 aaKnown RBP13.33□□□□□ -0.28
GACAT3-201ENST00000426539 LTBP3Q9NS15 1303 aa13.33□□□□□ -0.28
GACAT3-201ENST00000426539 NPHP1O15259 732 aa13.32□□□□□ -0.28
GACAT3-201ENST00000426539 VEGFAP15692 232 aaPredicted RBP13.32□□□□□ -0.28
GACAT3-201ENST00000426539 IFFO2Q5TF58 517 aa13.32□□□□□ -0.28
GACAT3-201ENST00000426539 SMC1BQ8NDV3 1235 aa13.32□□□□□ -0.28
GACAT3-201ENST00000426539 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
GACAT3-201ENST00000426539 SLX4Q8IY92 1834 aa13.32□□□□□ -0.28
GACAT3-201ENST00000426539 FAM177BA6PVY3 158 aa13.31□□□□□ -0.28
GACAT3-201ENST00000426539 ERFEQ4G0M1 354 aa13.31□□□□□ -0.28
GACAT3-201ENST00000426539 TAOK3Q9H2K8 898 aa13.31□□□□□ -0.28
GACAT3-201ENST00000426539 TIAM2Q8IVF5 1701 aa13.3□□□□□ -0.28
GACAT3-201ENST00000426539 FER1L6Q2WGJ9 1857 aa13.3□□□□□ -0.28
GACAT3-201ENST00000426539 OLFM4Q6UX06 510 aa13.3□□□□□ -0.28
GACAT3-201ENST00000426539 TPTE2Q6XPS3 522 aa13.3□□□□□ -0.28
GACAT3-201ENST00000426539 TTLL7Q6ZT98 887 aa13.3□□□□□ -0.28
GACAT3-201ENST00000426539 NGEFQ8N5V2 710 aa13.3□□□□□ -0.28
GACAT3-201ENST00000426539 WDR90Q96KV7 1748 aa13.3□□□□□ -0.28
GACAT3-201ENST00000426539 KDM3BQ7LBC6 1761 aa13.3□□□□□ -0.28
GACAT3-201ENST00000426539 NEFMP07197 916 aa13.29□□□□□ -0.28
GACAT3-201ENST00000426539 NPR1P16066 1061 aa13.29□□□□□ -0.28
GACAT3-201ENST00000426539 KLRG1Q96E93 195 aa13.29□□□□□ -0.28
GACAT3-201ENST00000426539 ABCC12Q96J65 1359 aa13.29□□□□□ -0.28
GACAT3-201ENST00000426539 LAMB4A4D0S4 1761 aa13.28□□□□□ -0.28
GACAT3-201ENST00000426539 ERVV-1B6SEH8 477 aa13.28□□□□□ -0.28
GACAT3-201ENST00000426539 DDNO94850 711 aaPredicted RBP13.28□□□□□ -0.28
GACAT3-201ENST00000426539 SOGA3Q5TF21 947 aa13.28□□□□□ -0.28
GACAT3-201ENST00000426539 DPY19L2Q6NUT2 758 aa13.28□□□□□ -0.28
GACAT3-201ENST00000426539 RRP7AQ9Y3A4 280 aaKnown RBP13.28□□□□□ -0.28
GACAT3-201ENST00000426539 DLG5Q8TDM6 1919 aa13.28□□□□□ -0.28
GACAT3-201ENST00000426539 MAP3K15Q6ZN16 1313 aa13.28□□□□□ -0.28
GACAT3-201ENST00000426539 CCDC88AQ3V6T2 1871 aa13.27□□□□□ -0.28
GACAT3-201ENST00000426539 MYL6BP14649 208 aa13.27□□□□□ -0.29
GACAT3-201ENST00000426539 CCDC93Q567U6 631 aa13.27□□□□□ -0.29
GACAT3-201ENST00000426539 LRP10Q7Z4F1 713 aa13.27□□□□□ -0.29
GACAT3-201ENST00000426539 NUTM1Q86Y26 1132 aa13.27□□□□□ -0.29
GACAT3-201ENST00000426539 JMYQ8N9B5 988 aa13.27□□□□□ -0.29
GACAT3-201ENST00000426539 UBN2Q6ZU65 1347 aa13.27□□□□□ -0.29
GACAT3-201ENST00000426539 MAPK8IP3Q9UPT6 1336 aa13.27□□□□□ -0.29
GACAT3-201ENST00000426539 ARFGEF2Q9Y6D5 1785 aa13.27□□□□□ -0.29
GACAT3-201ENST00000426539 POTEIP0CG38 1075 aa13.26□□□□□ -0.29
GACAT3-201ENST00000426539 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
GACAT3-201ENST00000426539 FKBP4Q02790 459 aaKnown RBP eCLIP13.26□□□□□ -0.29
GACAT3-201ENST00000426539 PDIA6Q15084 440 aa13.26□□□□□ -0.29
GACAT3-201ENST00000426539 RALBP1Q15311 655 aa13.26□□□□□ -0.29
GACAT3-201ENST00000426539 CRY2Q49AN0 593 aa13.26□□□□□ -0.29
GACAT3-201ENST00000426539 SNED1Q8TER0 1413 aa13.26□□□□□ -0.29
GACAT3-201ENST00000426539 PNNQ9H307 717 aaKnown RBP13.26□□□□□ -0.29
GACAT3-201ENST00000426539 ZBTB3Q9H5J0 574 aa13.26□□□□□ -0.29
GACAT3-201ENST00000426539 GPTP24298 496 aa13.25□□□□□ -0.29
GACAT3-201ENST00000426539 RIPK4P57078 832 aa13.25□□□□□ -0.29
GACAT3-201ENST00000426539 MKRN4PQ13434 485 aaPredicted RBP13.25□□□□□ -0.29
GACAT3-201ENST00000426539 SUSD4Q5VX71 490 aa13.25□□□□□ -0.29
GACAT3-201ENST00000426539 SLC51AQ86UW1 340 aa13.25□□□□□ -0.29
GACAT3-201ENST00000426539 ZNF34Q8IZ26 560 aa13.25□□□□□ -0.29
GACAT3-201ENST00000426539 ZNF277Q9NRM2 450 aaPredicted RBP13.25□□□□□ -0.29
GACAT3-201ENST00000426539 TSPYL4Q9UJ04 414 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms