RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 ABCC11Q96J66 1382 aa8.9□□□□□ -0.98
NIF3L1-207ENST00000426253 TOMM70O94826 608 aa8.9□□□□□ -0.98
NIF3L1-207ENST00000426253 CTDSPL2Q05D32 466 aa8.9□□□□□ -0.98
NIF3L1-207ENST00000426253 MORN1Q5T089 497 aa8.9□□□□□ -0.98
NIF3L1-207ENST00000426253 ZNF330Q9Y3S2 320 aaPredicted RBP8.9□□□□□ -0.98
NIF3L1-207ENST00000426253 SOWAHBA6NEL2 793 aa8.89□□□□□ -0.99
NIF3L1-207ENST00000426253 GOLGA8CPA6NN73 597 aa8.89□□□□□ -0.99
NIF3L1-207ENST00000426253 C11orf95C9JLR9 678 aaPredicted RBP8.89□□□□□ -0.99
NIF3L1-207ENST00000426253 Q3C1V9 767 aa8.89□□□□□ -0.99
NIF3L1-207ENST00000426253 ANKK1Q8NFD2 765 aa8.89□□□□□ -0.99
NIF3L1-207ENST00000426253 ARID3AQ99856 593 aa8.89□□□□□ -0.99
NIF3L1-207ENST00000426253 OVOS2A0A0G2JMS6 1433 aa8.88□□□□□ -0.99
NIF3L1-207ENST00000426253 OVOS2A0A0J9YW53 1432 aa8.88□□□□□ -0.99
NIF3L1-207ENST00000426253 PIK3C2GO75747 1445 aa8.88□□□□□ -0.99
NIF3L1-207ENST00000426253 OVOS2Q6IE36 1432 aa8.88□□□□□ -0.99
NIF3L1-207ENST00000426253 FMN2Q9NZ56 1722 aa8.88□□□□□ -0.99
NIF3L1-207ENST00000426253 CFAP99D6REC4 459 aa8.88□□□□□ -0.99
NIF3L1-207ENST00000426253 EVA1CP58658 441 aa8.88□□□□□ -0.99
NIF3L1-207ENST00000426253 PPP4CP60510 307 aa8.88□□□□□ -0.99
NIF3L1-207ENST00000426253 TXNRD1Q16881 649 aa8.88□□□□□ -0.99
NIF3L1-207ENST00000426253 POGKQ9P215 609 aa8.88□□□□□ -0.99
NIF3L1-207ENST00000426253 SALL2Q9Y467 1007 aaPredicted RBP8.88□□□□□ -0.99
NIF3L1-207ENST00000426253 YTHDC2Q9H6S0 1430 aaKnown RBP8.88□□□□□ -0.99
NIF3L1-207ENST00000426253 TOPAZ1Q8N9V7 1692 aa8.88□□□□□ -0.99
NIF3L1-207ENST00000426253 SBF2Q86WG5 1849 aa8.87□□□□□ -0.99
NIF3L1-207ENST00000426253 SAFB2Q14151 953 aaKnown RBP eCLIP8.87□□□□□ -0.99
NIF3L1-207ENST00000426253 CHRNA2Q15822 529 aa8.87□□□□□ -0.99
NIF3L1-207ENST00000426253 DESI1Q6ICB0 168 aa8.87□□□□□ -0.99
NIF3L1-207ENST00000426253 ANKRD13DQ6ZTN6 518 aa8.87□□□□□ -0.99
NIF3L1-207ENST00000426253 PTF1AQ7RTS3 328 aa8.87□□□□□ -0.99
NIF3L1-207ENST00000426253 RETREG3Q86VR2 466 aa8.87□□□□□ -0.99
NIF3L1-207ENST00000426253 CCDC82Q8N4S0 544 aa8.87□□□□□ -0.99
NIF3L1-207ENST00000426253 PRAM1Q96QH2 718 aa8.87□□□□□ -0.99
NIF3L1-207ENST00000426253 SERPINA10Q9UK55 444 aa8.87□□□□□ -0.99
NIF3L1-207ENST00000426253 TRAK1Q9UPV9 953 aa8.87□□□□□ -0.99
NIF3L1-207ENST00000426253 SLC27A5Q9Y2P5 690 aa8.87□□□□□ -0.99
NIF3L1-207ENST00000426253 NDUFB9Q9Y6M9 179 aa8.87□□□□□ -0.99
NIF3L1-207ENST00000426253 PLEKHH1Q9ULM0 1364 aa8.86□□□□□ -0.99
NIF3L1-207ENST00000426253 RGPD8O14715 1765 aaPredicted RBP8.86□□□□□ -0.99
NIF3L1-207ENST00000426253 ABL2P42684 1182 aa8.86□□□□□ -0.99
NIF3L1-207ENST00000426253 PRR7Q8TB68 274 aa8.86□□□□□ -0.99
NIF3L1-207ENST00000426253 SYMPKQ92797 1274 aaKnown RBP8.86□□□□□ -0.99
NIF3L1-207ENST00000426253 PLSCR2Q9NRY7 297 aa8.86□□□□□ -0.99
NIF3L1-207ENST00000426253 TSR3Q9UJK0 312 aaKnown RBP8.86□□□□□ -0.99
NIF3L1-207ENST00000426253 TBC1D2BQ9UPU7 963 aa8.86□□□□□ -0.99
NIF3L1-207ENST00000426253 PRAG1Q86YV5 1406 aa8.86□□□□□ -0.99
NIF3L1-207ENST00000426253 IFT172Q9UG01 1749 aa8.85□□□□□ -0.99
NIF3L1-207ENST00000426253 NRXN1Q9ULB1 1477 aa8.85□□□□□ -0.99
NIF3L1-207ENST00000426253 TRIM26Q12899 539 aaPredicted RBP8.85□□□□□ -0.99
NIF3L1-207ENST00000426253 NEUROD1Q13562 356 aa8.85□□□□□ -0.99
NIF3L1-207ENST00000426253 PUS10Q3MIT2 529 aaKnown RBP8.85□□□□□ -0.99
NIF3L1-207ENST00000426253 TCP11L2Q8N4U5 519 aa8.85□□□□□ -0.99
NIF3L1-207ENST00000426253 PMFBP1Q8TBY8 1022 aa8.85□□□□□ -0.99
NIF3L1-207ENST00000426253 SIN3AQ96ST3 1273 aa8.85□□□□□ -0.99
NIF3L1-207ENST00000426253 MLLT1Q03111 559 aaPredicted RBP8.84□□□□□ -0.99
NIF3L1-207ENST00000426253 C16orf71Q8IYS4 520 aaPredicted RBP8.84□□□□□ -0.99
NIF3L1-207ENST00000426253 ARHGEF28Q8N1W1 1705 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-207ENST00000426253 TSC1Q92574 1164 aa8.84□□□□□ -0.99
NIF3L1-207ENST00000426253 TRIM34Q9BYJ4 488 aa8.84□□□□□ -0.99
NIF3L1-207ENST00000426253 PEAK1Q9H792 1746 aa8.84□□□□□ -0.99
NIF3L1-207ENST00000426253 HMX1Q9NP08 348 aaPredicted RBP8.84□□□□□ -0.99
NIF3L1-207ENST00000426253 PARP4Q9UKK3 1724 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-207ENST00000426253 HPS5Q9UPZ3 1129 aa8.84□□□□□ -0.99
NIF3L1-207ENST00000426253 KIAA0232Q92628 1395 aa8.84□□□□□ -0.99
NIF3L1-207ENST00000426253 PCNTO95613 3336 aa8.83□□□□□ -1
NIF3L1-207ENST00000426253 SSH2Q76I76 1423 aa8.83□□□□□ -1
NIF3L1-207ENST00000426253 WASHC4Q2M389 1173 aa8.83□□□□□ -1
NIF3L1-207ENST00000426253 LRRN4Q8WUT4 740 aa8.83□□□□□ -1
NIF3L1-207ENST00000426253 WNT2BQ93097 391 aa8.83□□□□□ -1
NIF3L1-207ENST00000426253 LARP1Q6PKG0 1096 aaKnown RBP8.82□□□□□ -1
NIF3L1-207ENST00000426253 BRICD5Q6PL45 260 aa8.82□□□□□ -1
NIF3L1-207ENST00000426253 SCUBE3Q8IX30 993 aa8.82□□□□□ -1
NIF3L1-207ENST00000426253 L3MBTL2Q969R5 705 aa8.82□□□□□ -1
NIF3L1-207ENST00000426253 CCDC97Q96F63 343 aaPredicted RBP8.82□□□□□ -1
NIF3L1-207ENST00000426253 HIRIP3Q9BW71 556 aaPredicted RBP8.82□□□□□ -1
NIF3L1-207ENST00000426253 TULP4Q9NRJ4 1543 aa8.81□□□□□ -1
NIF3L1-207ENST00000426253 BCAMP50895 628 aa8.81□□□□□ -1
NIF3L1-207ENST00000426253 IRF5Q13568 498 aa8.81□□□□□ -1
NIF3L1-207ENST00000426253 NBPF1Q3BBV0 1214 aa8.81□□□□□ -1
NIF3L1-207ENST00000426253 USB1Q9BQ65 265 aaKnown RBP8.81□□□□□ -1
NIF3L1-207ENST00000426253 ATP7BP35670 1465 aa8.81□□□□□ -1
NIF3L1-207ENST00000426253 ALS2Q96Q42 1657 aa8.81□□□□□ -1
NIF3L1-207ENST00000426253 USP19O94966 1318 aa8.8□□□□□ -1
NIF3L1-207ENST00000426253 TRPM3Q9HCF6 1732 aaPredicted RBP8.8□□□□□ -1
NIF3L1-207ENST00000426253 KIAA1210Q9ULL0 1709 aa8.8□□□□□ -1
NIF3L1-207ENST00000426253 CRYBG1Q9Y4K1 1723 aa8.8□□□□□ -1
NIF3L1-207ENST00000426253 WASLO00401 505 aaPredicted RBP8.8□□□□□ -1
NIF3L1-207ENST00000426253 NR1I2O75469 434 aa8.8□□□□□ -1
NIF3L1-207ENST00000426253 ZC3H6P61129 1189 aaKnown RBP8.8□□□□□ -1
NIF3L1-207ENST00000426253 LYPD8Q6UX82 237 aa8.8□□□□□ -1
NIF3L1-207ENST00000426253 SLC16A10Q8TF71 515 aa8.8□□□□□ -1
NIF3L1-207ENST00000426253 THRAP3Q9Y2W1 955 aaKnown RBP8.8□□□□□ -1
NIF3L1-207ENST00000426253 PCDHB3Q9Y5E6 796 aa8.8□□□□□ -1
NIF3L1-207ENST00000426253 FMNL1O95466 1100 aaPredicted RBP8.79□□□□□ -1
NIF3L1-207ENST00000426253 DDB1Q16531 1140 aa8.79□□□□□ -1
NIF3L1-207ENST00000426253 ZNF827Q17R98 1081 aa8.79□□□□□ -1
NIF3L1-207ENST00000426253 BLOC1S3Q6QNY0 202 aa8.79□□□□□ -1
NIF3L1-207ENST00000426253 THAP11Q96EK4 314 aa8.79□□□□□ -1
NIF3L1-207ENST00000426253 NMRK2Q9NPI5 230 aa8.79□□□□□ -1
NIF3L1-207ENST00000426253 LRRC37A3O60309 1634 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms