RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 MYD88Q99836 296 aa19.91■□□□□ 0.78
SCRN1-205ENST00000425819 METTL22Q9BUU2 404 aaPredicted RBP19.91■□□□□ 0.78
SCRN1-205ENST00000425819 ZBTB40Q9NUA8 1239 aa19.91■□□□□ 0.78
SCRN1-205ENST00000425819 ATP10DQ9P241 1426 aa19.91■□□□□ 0.78
SCRN1-205ENST00000425819 RC3H1Q5TC82 1133 aaKnown RBP19.91■□□□□ 0.78
SCRN1-205ENST00000425819 CCDC136Q96JN2 1154 aa19.91■□□□□ 0.78
SCRN1-205ENST00000425819 CHMP4BQ9H444 224 aaKnown RBP19.91■□□□□ 0.78
SCRN1-205ENST00000425819 RREB1Q92766 1687 aa19.9■□□□□ 0.78
SCRN1-205ENST00000425819 PLSCR1O15162 318 aa19.9■□□□□ 0.78
SCRN1-205ENST00000425819 NEXNQ0ZGT2 675 aa19.9■□□□□ 0.78
SCRN1-205ENST00000425819 AAMPQ13685 434 aa19.9■□□□□ 0.78
SCRN1-205ENST00000425819 CWF19L2Q2TBE0 894 aaKnown RBP19.9■□□□□ 0.78
SCRN1-205ENST00000425819 DZIP3Q86Y13 1208 aaKnown RBP19.9■□□□□ 0.78
SCRN1-205ENST00000425819 PROM2Q8N271 834 aa19.9■□□□□ 0.78
SCRN1-205ENST00000425819 MEIS3Q99687 375 aa19.9■□□□□ 0.78
SCRN1-205ENST00000425819 TBC1D2BQ9UPU7 963 aa19.9■□□□□ 0.78
SCRN1-205ENST00000425819 MYH14Q7Z406 1995 aaKnown RBP19.89■□□□□ 0.77
SCRN1-205ENST00000425819 GNPATO15228 680 aa19.89■□□□□ 0.77
SCRN1-205ENST00000425819 LINS1Q8NG48 757 aa19.89■□□□□ 0.77
SCRN1-205ENST00000425819 MAP3K15Q6ZN16 1313 aa19.89■□□□□ 0.77
SCRN1-205ENST00000425819 ALDH1L1O75891 902 aa19.88■□□□□ 0.77
SCRN1-205ENST00000425819 IGKV5-2P06315 115 aa19.88■□□□□ 0.77
SCRN1-205ENST00000425819 SMIM5Q71RC9 77 aa19.88■□□□□ 0.77
SCRN1-205ENST00000425819 C1orf115Q9H7X2 142 aa19.88■□□□□ 0.77
SCRN1-205ENST00000425819 COL15A1P39059 1388 aa19.88■□□□□ 0.77
SCRN1-205ENST00000425819 TNS1Q9HBL0 1735 aaKnown RBP19.88■□□□□ 0.77
SCRN1-205ENST00000425819 ATP5J2-PTCD1G3V325 749 aa19.87■□□□□ 0.77
SCRN1-205ENST00000425819 AK7Q96M32 723 aa19.87■□□□□ 0.77
SCRN1-205ENST00000425819 PCDHB15Q9Y5E8 787 aa19.87■□□□□ 0.77
SCRN1-205ENST00000425819 RPS6KA4O75676 772 aa19.87■□□□□ 0.77
SCRN1-205ENST00000425819 USP44Q9H0E7 712 aa19.87■□□□□ 0.77
SCRN1-205ENST00000425819 ARFGEF2Q9Y6D5 1785 aa19.86■□□□□ 0.77
SCRN1-205ENST00000425819 EP400Q96L91 3159 aa19.86■□□□□ 0.77
SCRN1-205ENST00000425819 C4BP0C0L5 1744 aa19.86■□□□□ 0.77
SCRN1-205ENST00000425819 N4BP2Q86UW6 1770 aaPredicted RBP19.86■□□□□ 0.77
SCRN1-205ENST00000425819 NEURL1BA8MQ27 555 aa19.86■□□□□ 0.77
SCRN1-205ENST00000425819 HLFQ16534 295 aa19.86■□□□□ 0.77
SCRN1-205ENST00000425819 TAF1LQ8IZX4 1826 aa19.86■□□□□ 0.77
SCRN1-205ENST00000425819 RTCBQ9Y3I0 505 aaKnown RBP19.85■□□□□ 0.77
SCRN1-205ENST00000425819 NUP188Q5SRE5 1749 aa19.85■□□□□ 0.77
SCRN1-205ENST00000425819 A0A087WZG4 1122 aa19.84■□□□□ 0.77
SCRN1-205ENST00000425819 GNAI3P08754 354 aa19.84■□□□□ 0.77
SCRN1-205ENST00000425819 TCIRG1Q13488 830 aa19.84■□□□□ 0.77
SCRN1-205ENST00000425819 GIGYF2Q6Y7W6 1299 aaKnown RBP19.84■□□□□ 0.77
SCRN1-205ENST00000425819 AMIGO3Q86WK7 504 aa19.84■□□□□ 0.77
SCRN1-205ENST00000425819 ERVV-1B6SEH8 477 aa19.83■□□□□ 0.77
SCRN1-205ENST00000425819 PHF14O94880 888 aa19.83■□□□□ 0.77
SCRN1-205ENST00000425819 CAMTA2O94983 1202 aa19.83■□□□□ 0.77
SCRN1-205ENST00000425819 UBTFL1P0CB47 393 aaPredicted RBP19.83■□□□□ 0.77
SCRN1-205ENST00000425819 SF3B2Q13435 895 aaKnown RBP19.83■□□□□ 0.77
SCRN1-205ENST00000425819 C9orf78Q9NZ63 289 aaPredicted RBP19.83■□□□□ 0.77
SCRN1-205ENST00000425819 NBPF7P0C2Y1 421 aaPredicted RBP19.83■□□□□ 0.76
SCRN1-205ENST00000425819 EN1Q05925 392 aaPredicted RBP19.83■□□□□ 0.76
SCRN1-205ENST00000425819 GCKRQ14397 625 aa19.83■□□□□ 0.76
SCRN1-205ENST00000425819 GRM8O00222 908 aa19.81■□□□□ 0.76
SCRN1-205ENST00000425819 GNAI2P04899 355 aa19.81■□□□□ 0.76
SCRN1-205ENST00000425819 EZH2Q15910 746 aaKnown RBP19.81■□□□□ 0.76
SCRN1-205ENST00000425819 HSP90AB3PQ58FF7 597 aa19.81■□□□□ 0.76
SCRN1-205ENST00000425819 ISCA1Q9BUE6 129 aa19.81■□□□□ 0.76
SCRN1-205ENST00000425819 IGHDP01880 384 aa19.8■□□□□ 0.76
SCRN1-205ENST00000425819 GPTP24298 496 aa19.8■□□□□ 0.76
SCRN1-205ENST00000425819 HMGB2P26583 209 aaKnown RBP19.8■□□□□ 0.76
SCRN1-205ENST00000425819 ARHGEF1Q92888 912 aaKnown RBP19.8■□□□□ 0.76
SCRN1-205ENST00000425819 CAMKK2Q96RR4 588 aa19.8■□□□□ 0.76
SCRN1-205ENST00000425819 CWC25Q9NXE8 425 aaPredicted RBP19.8■□□□□ 0.76
SCRN1-205ENST00000425819 LRRFIP2Q9Y608 721 aaKnown RBP19.8■□□□□ 0.76
SCRN1-205ENST00000425819 BAG6P46379 1132 aa19.79■□□□□ 0.76
SCRN1-205ENST00000425819 TRAPPC3LQ5T215 181 aa19.79■□□□□ 0.76
SCRN1-205ENST00000425819 JARID2Q92833 1246 aaPredicted RBP19.79■□□□□ 0.76
SCRN1-205ENST00000425819 ZNF827Q17R98 1081 aa19.78■□□□□ 0.76
SCRN1-205ENST00000425819 DEFB132Q7Z7B7 95 aa19.78■□□□□ 0.76
SCRN1-205ENST00000425819 CCDC191Q8NCU4 936 aa19.78■□□□□ 0.76
SCRN1-205ENST00000425819 SRP68Q9UHB9 627 aaKnown RBP19.78■□□□□ 0.76
SCRN1-205ENST00000425819 IBTKQ9P2D0 1353 aaPredicted RBP19.78■□□□□ 0.76
SCRN1-205ENST00000425819 UTYO14607 1347 aa19.78■□□□□ 0.76
SCRN1-205ENST00000425819 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.78■□□□□ 0.76
SCRN1-205ENST00000425819 USPL1Q5W0Q7 1092 aa19.78■□□□□ 0.76
SCRN1-205ENST00000425819 RWDD1Q9H446 243 aaPredicted RBP19.78■□□□□ 0.76
SCRN1-205ENST00000425819 NARFQ9UHQ1 456 aa19.78■□□□□ 0.76
SCRN1-205ENST00000425819 RGPD3A6NKT7 1758 aaPredicted RBP19.78■□□□□ 0.76
SCRN1-205ENST00000425819 RGPD4Q7Z3J3 1758 aa19.78■□□□□ 0.76
SCRN1-205ENST00000425819 ZPR1O75312 459 aa19.77■□□□□ 0.76
SCRN1-205ENST00000425819 RFC4P35249 363 aa19.77■□□□□ 0.76
SCRN1-205ENST00000425819 TRIM28Q13263 835 aaKnown RBP19.77■□□□□ 0.76
SCRN1-205ENST00000425819 CEP85Q6P2H3 762 aa19.77■□□□□ 0.76
SCRN1-205ENST00000425819 UBE3BQ7Z3V4 1068 aa19.77■□□□□ 0.76
SCRN1-205ENST00000425819 SIRT2Q8IXJ6 389 aa19.77■□□□□ 0.76
SCRN1-205ENST00000425819 ZNF652Q9Y2D9 606 aa19.77■□□□□ 0.76
SCRN1-205ENST00000425819 AFDNP55196 1824 aaKnown RBP19.76■□□□□ 0.75
SCRN1-205ENST00000425819 ADRA2BP18089 450 aa19.76■□□□□ 0.75
SCRN1-205ENST00000425819 RTL5Q5HYW3 569 aaPredicted RBP19.76■□□□□ 0.75
SCRN1-205ENST00000425819 NLRP10Q86W26 655 aa19.76■□□□□ 0.75
SCRN1-205ENST00000425819 ZNF34Q8IZ26 560 aa19.76■□□□□ 0.75
SCRN1-205ENST00000425819 AKT1S1Q96B36 256 aa19.76■□□□□ 0.75
SCRN1-205ENST00000425819 SUCLG2Q96I99 432 aa19.76■□□□□ 0.75
SCRN1-205ENST00000425819 TFCP2L1Q9NZI6 479 aa19.76■□□□□ 0.75
SCRN1-205ENST00000425819 KDM2BQ8NHM5 1336 aa19.75■□□□□ 0.75
SCRN1-205ENST00000425819 SSFA2P28290 1259 aa19.75■□□□□ 0.75
SCRN1-205ENST00000425819 HDAC1Q13547 482 aaPredicted RBP19.75■□□□□ 0.75
SCRN1-205ENST00000425819 RPAP2Q8IXW5 612 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms