RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 IER5Q5VY09 327 aa7.29□□□□□ -1.24
HDAC9-209ENST00000425071 PCDHGC4Q9Y5F7 938 aa7.29□□□□□ -1.24
HDAC9-209ENST00000425071 LAMC2Q13753 1193 aa7.28□□□□□ -1.24
HDAC9-209ENST00000425071 C11orf91Q3C1V1 193 aa7.28□□□□□ -1.24
HDAC9-209ENST00000425071 ZCCHC2Q9C0B9 1178 aaKnown RBP7.28□□□□□ -1.24
HDAC9-209ENST00000425071 SLAIN2Q9P270 581 aa7.28□□□□□ -1.24
HDAC9-209ENST00000425071 ATXN7L1Q9ULK2 861 aaPredicted RBP7.28□□□□□ -1.24
HDAC9-209ENST00000425071 UBAP2LQ14157 1087 aaKnown RBP7.27□□□□□ -1.25
HDAC9-209ENST00000425071 C16orf46Q6P387 395 aa7.27□□□□□ -1.25
HDAC9-209ENST00000425071 GTPBP3Q969Y2 492 aaKnown RBP7.27□□□□□ -1.25
HDAC9-209ENST00000425071 NGLY1Q96IV0 654 aa7.27□□□□□ -1.25
HDAC9-209ENST00000425071 QTRT2Q9H974 415 aaKnown RBP7.27□□□□□ -1.25
HDAC9-209ENST00000425071 ATXN7O15265 892 aaPredicted RBP7.26□□□□□ -1.25
HDAC9-209ENST00000425071 FAM157BP0CG42 384 aa7.26□□□□□ -1.25
HDAC9-209ENST00000425071 SUSD3Q96L08 255 aa7.26□□□□□ -1.25
HDAC9-209ENST00000425071 NDFIP2Q9NV92 336 aa7.26□□□□□ -1.25
HDAC9-209ENST00000425071 NSFL1CQ9UNZ2 370 aaKnown RBP7.26□□□□□ -1.25
HDAC9-209ENST00000425071 ERBB4Q15303 1308 aa7.26□□□□□ -1.25
HDAC9-209ENST00000425071 TGFBR3LH3BV60 316 aa7.25□□□□□ -1.25
HDAC9-209ENST00000425071 BRD1O95696 1058 aa7.25□□□□□ -1.25
HDAC9-209ENST00000425071 THBS1P07996 1170 aa7.25□□□□□ -1.25
HDAC9-209ENST00000425071 BRD2P25440 801 aaKnown RBP7.25□□□□□ -1.25
HDAC9-209ENST00000425071 ARID4AP29374 1257 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-209ENST00000425071 LRRC69Q6ZNQ3 347 aa7.25□□□□□ -1.25
HDAC9-209ENST00000425071 TRAIPQ9BWF2 469 aa7.25□□□□□ -1.25
HDAC9-209ENST00000425071 WIPF1O43516 503 aa7.24□□□□□ -1.25
HDAC9-209ENST00000425071 BNIP3LO60238 219 aa7.24□□□□□ -1.25
HDAC9-209ENST00000425071 TNP2Q05952 138 aa7.24□□□□□ -1.25
HDAC9-209ENST00000425071 COX20Q5RI15 118 aa7.24□□□□□ -1.25
HDAC9-209ENST00000425071 FAM182BQ5T319 152 aa7.24□□□□□ -1.25
HDAC9-209ENST00000425071 PHLDB3Q6NSJ2 640 aa7.24□□□□□ -1.25
HDAC9-209ENST00000425071 GPR161Q8N6U8 529 aaKnown RBP7.24□□□□□ -1.25
HDAC9-209ENST00000425071 C11orf16Q9NQ32 467 aa7.24□□□□□ -1.25
HDAC9-209ENST00000425071 PATL2C9JE40 543 aaKnown RBP7.23□□□□□ -1.25
HDAC9-209ENST00000425071 EFSO43281 561 aa7.23□□□□□ -1.25
HDAC9-209ENST00000425071 DGKZQ13574 1117 aa7.23□□□□□ -1.25
HDAC9-209ENST00000425071 BTLAQ7Z6A9 289 aa7.23□□□□□ -1.25
HDAC9-209ENST00000425071 MKNK1Q9BUB5 465 aa7.23□□□□□ -1.25
HDAC9-209ENST00000425071 COL25A1Q9BXS0 654 aaPredicted RBP7.23□□□□□ -1.25
HDAC9-209ENST00000425071 MBIPQ9NS73 344 aa7.23□□□□□ -1.25
HDAC9-209ENST00000425071 MAPTP10636 758 aaKnown RBP7.22□□□□□ -1.25
HDAC9-209ENST00000425071 EPB42P16452 691 aa7.22□□□□□ -1.25
HDAC9-209ENST00000425071 MX2P20592 715 aa7.22□□□□□ -1.25
HDAC9-209ENST00000425071 GMPRP36959 345 aa7.22□□□□□ -1.25
HDAC9-209ENST00000425071 MAP2K3P46734 347 aa7.22□□□□□ -1.25
HDAC9-209ENST00000425071 KCNQ4P56696 695 aa7.22□□□□□ -1.25
HDAC9-209ENST00000425071 SRSF11Q05519 484 aaKnown RBP7.22□□□□□ -1.25
HDAC9-209ENST00000425071 ABTB2Q8N961 1025 aa7.22□□□□□ -1.25
HDAC9-209ENST00000425071 IFT43Q96FT9 208 aa7.22□□□□□ -1.25
HDAC9-209ENST00000425071 ABHD17AQ96GS6 310 aa7.22□□□□□ -1.25
HDAC9-209ENST00000425071 CEP63Q96MT8 703 aa7.22□□□□□ -1.25
HDAC9-209ENST00000425071 EFCC1Q9HA90 598 aa7.22□□□□□ -1.25
HDAC9-209ENST00000425071 FAM13BQ9NYF5 915 aa7.22□□□□□ -1.25
HDAC9-209ENST00000425071 STIM2Q9P246 746 aa7.22□□□□□ -1.25
HDAC9-209ENST00000425071 LRFN2Q9ULH4 789 aa7.22□□□□□ -1.25
HDAC9-209ENST00000425071 CARNS1A5YM72 827 aa7.21□□□□□ -1.26
HDAC9-209ENST00000425071 GPR25O00155 361 aa7.21□□□□□ -1.26
HDAC9-209ENST00000425071 KHNYNO15037 678 aaKnown RBP7.21□□□□□ -1.26
HDAC9-209ENST00000425071 FGFR3P22607 806 aa7.21□□□□□ -1.26
HDAC9-209ENST00000425071 SF3B2Q13435 895 aaKnown RBP7.21□□□□□ -1.26
HDAC9-209ENST00000425071 ZNF280CQ8ND82 737 aa7.21□□□□□ -1.26
HDAC9-209ENST00000425071 CCER1Q8TC90 406 aaPredicted RBP7.21□□□□□ -1.26
HDAC9-209ENST00000425071 HELQQ8TDG4 1101 aa7.21□□□□□ -1.26
HDAC9-209ENST00000425071 HSH2DQ96JZ2 352 aa7.21□□□□□ -1.26
HDAC9-209ENST00000425071 KLK14Q9P0G3 267 aa7.21□□□□□ -1.26
HDAC9-209ENST00000425071 MARK1Q9P0L2 795 aa7.21□□□□□ -1.26
HDAC9-209ENST00000425071 EGFL7Q9UHF1 273 aa7.21□□□□□ -1.26
HDAC9-209ENST00000425071 DMGDHQ9UI17 866 aaKnown RBP7.21□□□□□ -1.26
HDAC9-209ENST00000425071 MICAL2O94851 1124 aa7.2□□□□□ -1.26
HDAC9-209ENST00000425071 PDIA4P13667 645 aaKnown RBP7.2□□□□□ -1.26
HDAC9-209ENST00000425071 TYRO3Q06418 890 aa7.2□□□□□ -1.26
HDAC9-209ENST00000425071 GAS6Q14393 721 aa7.2□□□□□ -1.26
HDAC9-209ENST00000425071 NAA30Q147X3 362 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-209ENST00000425071 SAP130Q9H0E3 1048 aa7.2□□□□□ -1.26
HDAC9-209ENST00000425071 BRD7Q9NPI1 651 aa7.2□□□□□ -1.26
HDAC9-209ENST00000425071 AVENQ9NQS1 362 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-209ENST00000425071 BCS1LQ9Y276 419 aa7.2□□□□□ -1.26
HDAC9-209ENST00000425071 DCDC2BA2VCK2 349 aa7.19□□□□□ -1.26
HDAC9-209ENST00000425071 ARSDP51689 593 aa7.19□□□□□ -1.26
HDAC9-209ENST00000425071 NEUROD1Q13562 356 aa7.19□□□□□ -1.26
HDAC9-209ENST00000425071 LCE2CQ5TA81 110 aa7.19□□□□□ -1.26
HDAC9-209ENST00000425071 CAPN12Q6ZSI9 719 aa7.19□□□□□ -1.26
HDAC9-209ENST00000425071 TXNDC2Q86VQ3 553 aa7.19□□□□□ -1.26
HDAC9-209ENST00000425071 GTF3C2Q8WUA4 911 aaPredicted RBP7.19□□□□□ -1.26
HDAC9-209ENST00000425071 SEPT3Q9UH03 358 aa7.19□□□□□ -1.26
HDAC9-209ENST00000425071 KCNH4Q9UQ05 1017 aa7.19□□□□□ -1.26
HDAC9-209ENST00000425071 GNEQ9Y223 722 aaKnown RBP7.19□□□□□ -1.26
HDAC9-209ENST00000425071 FAM13AO94988 1023 aa7.18□□□□□ -1.26
HDAC9-209ENST00000425071 SLURP2P0DP57 97 aa7.18□□□□□ -1.26
HDAC9-209ENST00000425071 BMP4P12644 408 aa7.18□□□□□ -1.26
HDAC9-209ENST00000425071 NPR3P17342 541 aa7.18□□□□□ -1.26
HDAC9-209ENST00000425071 INPP5BP32019 993 aa7.18□□□□□ -1.26
HDAC9-209ENST00000425071 IDH3AP50213 366 aa7.18□□□□□ -1.26
HDAC9-209ENST00000425071 INSM1Q01101 510 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-209ENST00000425071 FKBP4Q02790 459 aaKnown RBP eCLIP7.18□□□□□ -1.26
HDAC9-209ENST00000425071 KCNA1Q09470 495 aa7.18□□□□□ -1.26
HDAC9-209ENST00000425071 RNFT1Q5M7Z0 435 aa7.18□□□□□ -1.26
HDAC9-209ENST00000425071 ALKBH2Q6NS38 261 aa7.18□□□□□ -1.26
HDAC9-209ENST00000425071 CNTNAP3BQ96NU0 1288 aa7.18□□□□□ -1.26
HDAC9-209ENST00000425071 CNTNAP3Q9BZ76 1288 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms