RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 RASSF7Q02833 373 aa21.36■■□□□ 1.01
DDR1-234ENST00000424544 KDM3BQ7LBC6 1761 aa21.36■■□□□ 1.01
DDR1-234ENST00000424544 HLFQ16534 295 aa21.35■■□□□ 1.01
DDR1-234ENST00000424544 STYK1Q6J9G0 422 aa21.35■■□□□ 1.01
DDR1-234ENST00000424544 ZNF622Q969S3 477 aaKnown RBP eCLIP21.35■■□□□ 1.01
DDR1-234ENST00000424544 ZNF652Q9Y2D9 606 aa21.35■■□□□ 1.01
DDR1-234ENST00000424544 KDM2BQ8NHM5 1336 aa21.33■■□□□ 1.01
DDR1-234ENST00000424544 ERVV-1B6SEH8 477 aa21.33■■□□□ 1.01
DDR1-234ENST00000424544 ST5P78524 1137 aa21.33■■□□□ 1.01
DDR1-234ENST00000424544 RBM46Q8TBY0 533 aaKnown RBP21.33■■□□□ 1.01
DDR1-234ENST00000424544 C7orf43Q8WVR3 580 aa21.33■■□□□ 1.01
DDR1-234ENST00000424544 CNKSR1Q969H4 720 aa21.33■■□□□ 1.01
DDR1-234ENST00000424544 MASTLQ96GX5 879 aa21.33■■□□□ 1.01
DDR1-234ENST00000424544 BABAM1Q9NWV8 329 aa21.33■■□□□ 1.01
DDR1-234ENST00000424544 MAPK8IP3Q9UPT6 1336 aa21.32■■□□□ 1
DDR1-234ENST00000424544 C21orf2O43822 256 aa21.32■■□□□ 1
DDR1-234ENST00000424544 TMPOP42166 694 aaKnown RBP21.32■■□□□ 1
DDR1-234ENST00000424544 RIPK4P57078 832 aa21.32■■□□□ 1
DDR1-234ENST00000424544 TPTE2Q6XPS3 522 aa21.32■■□□□ 1
DDR1-234ENST00000424544 NBPF5PQ86XG9 351 aaPredicted RBP21.32■■□□□ 1
DDR1-234ENST00000424544 RRAGCQ9HB90 399 aa21.32■■□□□ 1
DDR1-234ENST00000424544 NIP7Q9Y221 180 aaKnown RBP eCLIP21.32■■□□□ 1
DDR1-234ENST00000424544 COL11A2P13942 1736 aaPredicted RBP21.32■■□□□ 1
DDR1-234ENST00000424544 GLTPD2A6NH11 291 aa21.31■■□□□ 1
DDR1-234ENST00000424544 MYBBP1AQ9BQG0 1328 aaKnown RBP21.3■■□□□ 1
DDR1-234ENST00000424544 LRP10Q7Z4F1 713 aa21.3■■□□□ 1
DDR1-234ENST00000424544 LTBP3Q9NS15 1303 aa21.29■■□□□ 1
DDR1-234ENST00000424544 SLX4Q8IY92 1834 aa21.29■■□□□ 1
DDR1-234ENST00000424544 FER1L6Q2WGJ9 1857 aa21.29■■□□□ 1
DDR1-234ENST00000424544 PRPF40BQ6NWY9 871 aaKnown RBP21.29■■□□□ 1
DDR1-234ENST00000424544 TTLL7Q6ZT98 887 aa21.29■■□□□ 1
DDR1-234ENST00000424544 LAMB4A4D0S4 1761 aa21.28■■□□□ 1
DDR1-234ENST00000424544 PDIA6Q15084 440 aa21.28■■□□□ 1
DDR1-234ENST00000424544 DNAJC5GQ8N7S2 189 aa21.28■■□□□ 1
DDR1-234ENST00000424544 RRP7AQ9Y3A4 280 aaKnown RBP21.28■■□□□ 1
DDR1-234ENST00000424544 CCDC88AQ3V6T2 1871 aa21.28■■□□□ 1
DDR1-234ENST00000424544 ERBB4Q15303 1308 aa21.28■■□□□ 1
DDR1-234ENST00000424544 MAP3K15Q6ZN16 1313 aa21.28■■□□□ 1
DDR1-234ENST00000424544 POTECB2RU33 542 aa21.27■■□□□ 1
DDR1-234ENST00000424544 NPR1P16066 1061 aa21.27■■□□□ 1
DDR1-234ENST00000424544 NPHP1O15259 732 aa21.26■□□□□ 0.99
DDR1-234ENST00000424544 APLP1P51693 650 aa21.26■□□□□ 0.99
DDR1-234ENST00000424544 FSTL1Q12841 308 aa21.26■□□□□ 0.99
DDR1-234ENST00000424544 TSPYL4Q9UJ04 414 aa21.26■□□□□ 0.99
DDR1-234ENST00000424544 SOGA3Q5TF21 947 aa21.25■□□□□ 0.99
DDR1-234ENST00000424544 ZNF34Q8IZ26 560 aa21.25■□□□□ 0.99
DDR1-234ENST00000424544 NGEFQ8N5V2 710 aa21.25■□□□□ 0.99
DDR1-234ENST00000424544 TRIM35Q9UPQ4 493 aa21.25■□□□□ 0.99
DDR1-234ENST00000424544 CHL1O00533 1208 aa21.24■□□□□ 0.99
DDR1-234ENST00000424544 VEGFAP15692 232 aaPredicted RBP21.24■□□□□ 0.99
DDR1-234ENST00000424544 CRY2Q49AN0 593 aa21.24■□□□□ 0.99
DDR1-234ENST00000424544 TAOK3Q9H2K8 898 aa21.24■□□□□ 0.99
DDR1-234ENST00000424544 PRKRIP1Q9H875 184 aaPredicted RBP21.24■□□□□ 0.99
DDR1-234ENST00000424544 ZNF219Q9P2Y4 722 aaPredicted RBP21.24■□□□□ 0.99
DDR1-234ENST00000424544 ADAMTS8Q9UP79 889 aa21.24■□□□□ 0.99
DDR1-234ENST00000424544 NUP98P52948 1817 aa21.23■□□□□ 0.99
DDR1-234ENST00000424544 MYL6BP14649 208 aa21.23■□□□□ 0.99
DDR1-234ENST00000424544 LMOD3Q0VAK6 560 aa21.23■□□□□ 0.99
DDR1-234ENST00000424544 ERFEQ4G0M1 354 aa21.23■□□□□ 0.99
DDR1-234ENST00000424544 RUNDC1Q96C34 613 aa21.23■□□□□ 0.99
DDR1-234ENST00000424544 DICER1Q9UPY3 1922 aaKnown RBP21.23■□□□□ 0.99
DDR1-234ENST00000424544 ARFGEF2Q9Y6D5 1785 aa21.23■□□□□ 0.99
DDR1-234ENST00000424544 TNRC6CQ9HCJ0 1690 aaKnown RBP21.22■□□□□ 0.99
DDR1-234ENST00000424544 DIEXFQ68CQ4 756 aaKnown RBP21.22■□□□□ 0.99
DDR1-234ENST00000424544 GIGYF2Q6Y7W6 1299 aaKnown RBP21.22■□□□□ 0.99
DDR1-234ENST00000424544 C16orf71Q8IYS4 520 aaPredicted RBP21.22■□□□□ 0.99
DDR1-234ENST00000424544 NYXQ9GZU5 481 aa21.22■□□□□ 0.99
DDR1-234ENST00000424544 UBN2Q6ZU65 1347 aa21.22■□□□□ 0.99
DDR1-234ENST00000424544 FAM177BA6PVY3 158 aa21.21■□□□□ 0.99
DDR1-234ENST00000424544 ALDH1B1P30837 517 aa21.21■□□□□ 0.99
DDR1-234ENST00000424544 SUSD4Q5VX71 490 aa21.21■□□□□ 0.99
DDR1-234ENST00000424544 DPY19L2Q6NUT2 758 aa21.21■□□□□ 0.99
DDR1-234ENST00000424544 KIF6Q6ZMV9 814 aa21.21■□□□□ 0.99
DDR1-234ENST00000424544 CCDC146Q8IYE0 955 aa21.21■□□□□ 0.99
DDR1-234ENST00000424544 IBTKQ9P2D0 1353 aaPredicted RBP21.21■□□□□ 0.99
DDR1-234ENST00000424544 HOXA10P31260 410 aaPredicted RBP21.2■□□□□ 0.98
DDR1-234ENST00000424544 PROSER3Q2NL68 480 aa21.2■□□□□ 0.98
DDR1-234ENST00000424544 NUTM1Q86Y26 1132 aa21.2■□□□□ 0.98
DDR1-234ENST00000424544 EIF2S2P20042 333 aaKnown RBP21.19■□□□□ 0.98
DDR1-234ENST00000424544 ZBTB3Q9H5J0 574 aa21.19■□□□□ 0.98
DDR1-234ENST00000424544 ABCC12Q96J65 1359 aa21.19■□□□□ 0.98
DDR1-234ENST00000424544 NEUROD2Q15784 382 aa21.18■□□□□ 0.98
DDR1-234ENST00000424544 CCDC93Q567U6 631 aa21.18■□□□□ 0.98
DDR1-234ENST00000424544 SLC10A5Q5PT55 438 aa21.18■□□□□ 0.98
DDR1-234ENST00000424544 OLFM4Q6UX06 510 aa21.18■□□□□ 0.98
DDR1-234ENST00000424544 SMC1BQ8NDV3 1235 aa21.18■□□□□ 0.98
DDR1-234ENST00000424544 RIC1Q4ADV7 1423 aa21.18■□□□□ 0.98
DDR1-234ENST00000424544 SNED1Q8TER0 1413 aa21.18■□□□□ 0.98
DDR1-234ENST00000424544 WDR90Q96KV7 1748 aa21.18■□□□□ 0.98
DDR1-234ENST00000424544 NTSR2O95665 410 aa21.17■□□□□ 0.98
DDR1-234ENST00000424544 GPTP24298 496 aa21.17■□□□□ 0.98
DDR1-234ENST00000424544 GTF2E1P29083 439 aaPredicted RBP21.17■□□□□ 0.98
DDR1-234ENST00000424544 RTKN2Q8IZC4 609 aa21.17■□□□□ 0.98
DDR1-234ENST00000424544 TIAM2Q8IVF5 1701 aa21.17■□□□□ 0.98
DDR1-234ENST00000424544 PCNTO95613 3336 aa21.17■□□□□ 0.98
DDR1-234ENST00000424544 ANXA1P04083 346 aa21.16■□□□□ 0.98
DDR1-234ENST00000424544 FKBP4Q02790 459 aaKnown RBP eCLIP21.16■□□□□ 0.98
DDR1-234ENST00000424544 CACNA1SQ13698 1873 aa21.15■□□□□ 0.98
DDR1-234ENST00000424544 WDR43Q15061 677 aaKnown RBP eCLIP21.15■□□□□ 0.98
DDR1-234ENST00000424544 KRT24Q2M2I5 525 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms