RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 USP48Q86UV5 1035 aa4.34□□□□□ -1.71
TOP2A-201ENST00000423485 MICAL1Q8TDZ2 1067 aa4.34□□□□□ -1.71
TOP2A-201ENST00000423485 TRIM47Q96LD4 638 aa4.34□□□□□ -1.71
TOP2A-201ENST00000423485 MYBBP1AQ9BQG0 1328 aaKnown RBP4.34□□□□□ -1.71
TOP2A-201ENST00000423485 ZRSR1Q15695 479 aaKnown RBP4.34□□□□□ -1.71
TOP2A-201ENST00000423485 INTS3Q68E01 1043 aaKnown RBP4.34□□□□□ -1.71
TOP2A-201ENST00000423485 DNAJC2Q99543 621 aaKnown RBP4.34□□□□□ -1.71
TOP2A-201ENST00000423485 CLTCL1P53675 1640 aa4.34□□□□□ -1.71
TOP2A-201ENST00000423485 ABCA9Q8IUA7 1624 aa4.34□□□□□ -1.71
TOP2A-201ENST00000423485 TMEM88BA6NKF7 163 aa4.34□□□□□ -1.71
TOP2A-201ENST00000423485 HTATSF1O43719 755 aaKnown RBP4.34□□□□□ -1.71
TOP2A-201ENST00000423485 CAVIN4Q5BKX8 364 aa4.34□□□□□ -1.71
TOP2A-201ENST00000423485 CCDC117Q8IWD4 279 aaPredicted RBP4.34□□□□□ -1.71
TOP2A-201ENST00000423485 PNISRQ8TF01 805 aaKnown RBP4.34□□□□□ -1.71
TOP2A-201ENST00000423485 PODXL2Q9NZ53 605 aa4.34□□□□□ -1.71
TOP2A-201ENST00000423485 HLA-DOAP06340 250 aa4.34□□□□□ -1.72
TOP2A-201ENST00000423485 HUNKP57058 714 aa4.34□□□□□ -1.72
TOP2A-201ENST00000423485 MFSD14CQ5VZR4 134 aa4.34□□□□□ -1.72
TOP2A-201ENST00000423485 CCDC155Q8N6L0 562 aa4.34□□□□□ -1.72
TOP2A-201ENST00000423485 SERTAD1Q9UHV2 236 aa4.34□□□□□ -1.72
TOP2A-201ENST00000423485 PREX1Q8TCU6 1659 aa4.34□□□□□ -1.72
TOP2A-201ENST00000423485 RGPD8O14715 1765 aaPredicted RBP4.34□□□□□ -1.72
TOP2A-201ENST00000423485 GLI3P10071 1580 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 PLIN1O60240 522 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 TBC1D8O95759 1140 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 COL9A3Q14050 684 aaPredicted RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 CHADLQ6NUI6 762 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 FTOQ9C0B1 505 aaKnown RBP eCLIP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 AS3MTQ9HBK9 375 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 ZNF287Q9HBT7 754 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 PNMA3Q9UL41 463 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 CELF2O95319 508 aaKnown RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 AKAP17AQ02040 695 aaKnown RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 RTL5Q5HYW3 569 aaPredicted RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 ZNF530Q6P9A1 599 aaPredicted RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 ITSN2Q9NZM3 1697 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 DUOX2Q9NRD8 1548 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 NR1I2O75469 434 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 CDC5LQ99459 802 aaKnown RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 PRDM15P57071 1507 aaPredicted RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 ZFYVE16Q7Z3T8 1539 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 EIF2S2P20042 333 aaKnown RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 PDE4AP27815 886 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 NCBP1Q09161 790 aaKnown RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 DPP8Q6V1X1 898 aaPredicted RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 LEO1Q8WVC0 666 aaPredicted RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 G3BP2Q9UN86 482 aaKnown RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 RALGAPBQ86X10 1494 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 NRXN1Q9ULB1 1477 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 HSPA1AP0DMV8 641 aaKnown RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 HSPA1BP0DMV9 641 aaKnown RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 TBC1D9Q6ZT07 1266 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 GPR101Q96P66 508 aaPredicted RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 EHMT1Q9H9B1 1298 aa4.33□□□□□ -1.72
TOP2A-201ENST00000423485 RRP7AQ9Y3A4 280 aaKnown RBP4.33□□□□□ -1.72
TOP2A-201ENST00000423485 RAD50Q92878 1312 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 FYB1O15117 783 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 FKTNO75072 461 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 GAS2L2Q8NHY3 880 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 RIMBP3CA6NJZ7 1639 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 RIMBP3BA6NNM3 1639 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 RIMBP3Q9UFD9 1639 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 ROCK2O75116 1388 aaKnown RBP4.32□□□□□ -1.72
TOP2A-201ENST00000423485 LMNB1P20700 586 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 PLS1Q14651 629 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 EZH2Q15910 746 aaKnown RBP4.32□□□□□ -1.72
TOP2A-201ENST00000423485 SYNE3Q6ZMZ3 975 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 FBXL21Q9UKT6 434 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 TBC1D2BQ9UPU7 963 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 KDM4AO75164 1064 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 LDHCP07864 332 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 MS4A1P11836 297 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 NOGQ13253 232 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 WASHC4Q2M389 1173 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 AMOTQ4VCS5 1084 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 FBXO31Q5XUX0 539 aaPredicted RBP4.32□□□□□ -1.72
TOP2A-201ENST00000423485 RAB11FIP4Q86YS3 637 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 FHDC1Q9C0D6 1143 aaPredicted RBP4.32□□□□□ -1.72
TOP2A-201ENST00000423485 PLEKHG2Q9H7P9 1386 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 NINLQ9Y2I6 1382 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 DLL1O00548 723 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 SYNMO15061 1565 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 PLXNC1O60486 1568 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 ATXN3P54252 364 aaPredicted RBP4.32□□□□□ -1.72
TOP2A-201ENST00000423485 ILDR2Q71H61 639 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 RASSF8Q8NHQ8 419 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 EFCC1Q9HA90 598 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 LRFN2Q9ULH4 789 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 TBX22Q9Y458 520 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 BSNQ9UPA5 3926 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 IQGAP3Q86VI3 1631 aa4.32□□□□□ -1.72
TOP2A-201ENST00000423485 PPEF1O14829 653 aaPredicted RBP4.31□□□□□ -1.72
TOP2A-201ENST00000423485 IFNL2Q8IZJ0 200 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 RBM46Q8TBY0 533 aaKnown RBP4.31□□□□□ -1.72
TOP2A-201ENST00000423485 C9orf78Q9NZ63 289 aaPredicted RBP4.31□□□□□ -1.72
TOP2A-201ENST00000423485 PPP4R3BQ5MIZ7 849 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 TCP11L1Q9NUJ3 509 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 BSDC1Q9NW68 430 aaPredicted RBP4.31□□□□□ -1.72
TOP2A-201ENST00000423485 PTCD1O75127 700 aaKnown RBP4.31□□□□□ -1.72
TOP2A-201ENST00000423485 FAM47CQ5HY64 1035 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms