RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 DBF4Q9UBU7 674 aaPredicted RBP11.95□□□□□ -0.5
PDGFC-202ENST00000422544 COL15A1P39059 1388 aa11.94□□□□□ -0.5
PDGFC-202ENST00000422544 CICQ96RK0 1608 aaPredicted RBP11.94□□□□□ -0.5
PDGFC-202ENST00000422544 ZPR1O75312 459 aa11.94□□□□□ -0.5
PDGFC-202ENST00000422544 USPL1Q5W0Q7 1092 aa11.94□□□□□ -0.5
PDGFC-202ENST00000422544 LRP10Q7Z4F1 713 aa11.94□□□□□ -0.5
PDGFC-202ENST00000422544 DZIP3Q86Y13 1208 aaKnown RBP11.94□□□□□ -0.5
PDGFC-202ENST00000422544 SLC16A10Q8TF71 515 aa11.94□□□□□ -0.5
PDGFC-202ENST00000422544 CHMP4AQ9BY43 222 aa11.94□□□□□ -0.5
PDGFC-202ENST00000422544 NARFQ9UHQ1 456 aa11.94□□□□□ -0.5
PDGFC-202ENST00000422544 COL5A3P25940 1745 aaPredicted RBP11.94□□□□□ -0.5
PDGFC-202ENST00000422544 USP42Q9H9J4 1324 aaKnown RBP11.93□□□□□ -0.5
PDGFC-202ENST00000422544 GYS1P13807 737 aa11.93□□□□□ -0.5
PDGFC-202ENST00000422544 AIMP1Q12904 312 aaKnown RBP11.93□□□□□ -0.5
PDGFC-202ENST00000422544 TTLL7Q6ZT98 887 aa11.93□□□□□ -0.5
PDGFC-202ENST00000422544 COPS6Q7L5N1 327 aa11.93□□□□□ -0.5
PDGFC-202ENST00000422544 ADCY9O60503 1353 aa11.92□□□□□ -0.5
PDGFC-202ENST00000422544 CAMTA2O94983 1202 aa11.92□□□□□ -0.5
PDGFC-202ENST00000422544 FKBP8Q14318 412 aa11.92□□□□□ -0.5
PDGFC-202ENST00000422544 XAGE3Q8WTP9 111 aa11.92□□□□□ -0.5
PDGFC-202ENST00000422544 STK31Q9BXU1 1019 aa11.92□□□□□ -0.5
PDGFC-202ENST00000422544 BCL2L12Q9HB09 334 aa11.92□□□□□ -0.5
PDGFC-202ENST00000422544 HYPKQ9NX55 129 aa11.92□□□□□ -0.5
PDGFC-202ENST00000422544 KIAA1551Q9HCM1 1747 aa11.91□□□□□ -0.5
PDGFC-202ENST00000422544 SLC4A2P04920 1241 aa11.91□□□□□ -0.5
PDGFC-202ENST00000422544 KIF6Q6ZMV9 814 aa11.91□□□□□ -0.5
PDGFC-202ENST00000422544 NLGN1Q8N2Q7 840 aa11.91□□□□□ -0.5
PDGFC-202ENST00000422544 PHAXQ9H814 394 aaKnown RBP11.91□□□□□ -0.5
PDGFC-202ENST00000422544 ATP10DQ9P241 1426 aa11.91□□□□□ -0.5
PDGFC-202ENST00000422544 UBR3Q6ZT12 1888 aa11.91□□□□□ -0.5
PDGFC-202ENST00000422544 HLFQ16534 295 aa11.9□□□□□ -0.5
PDGFC-202ENST00000422544 GPR162Q16538 588 aa11.9□□□□□ -0.5
PDGFC-202ENST00000422544 G2E3Q7L622 706 aa11.9□□□□□ -0.5
PDGFC-202ENST00000422544 ZBTB3Q9H5J0 574 aa11.9□□□□□ -0.5
PDGFC-202ENST00000422544 MAP3K15Q6ZN16 1313 aa11.89□□□□□ -0.51
PDGFC-202ENST00000422544 ERVV-1B6SEH8 477 aa11.89□□□□□ -0.51
PDGFC-202ENST00000422544 MMP10P09238 476 aa11.89□□□□□ -0.51
PDGFC-202ENST00000422544 POLD1P28340 1107 aa11.89□□□□□ -0.51
PDGFC-202ENST00000422544 TBC1D9BQ66K14 1250 aa11.89□□□□□ -0.51
PDGFC-202ENST00000422544 BICDL1Q6ZP65 573 aa11.89□□□□□ -0.51
PDGFC-202ENST00000422544 CT47B1P0C2W7 299 aaPredicted RBP11.88□□□□□ -0.51
PDGFC-202ENST00000422544 TM4SF1P30408 202 aa11.88□□□□□ -0.51
PDGFC-202ENST00000422544 NFIXQ14938 502 aa11.88□□□□□ -0.51
PDGFC-202ENST00000422544 CLEC4GQ6UXB4 293 aa11.88□□□□□ -0.51
PDGFC-202ENST00000422544 ANKRD13DQ6ZTN6 518 aa11.88□□□□□ -0.51
PDGFC-202ENST00000422544 SSH1Q8WYL5 1049 aa11.88□□□□□ -0.51
PDGFC-202ENST00000422544 BCL2L13Q9BXK5 485 aa11.88□□□□□ -0.51
PDGFC-202ENST00000422544 ZNF652Q9Y2D9 606 aa11.88□□□□□ -0.51
PDGFC-202ENST00000422544 LAMB4A4D0S4 1761 aa11.87□□□□□ -0.51
PDGFC-202ENST00000422544 MRPL50Q8N5N7 158 aaKnown RBP11.87□□□□□ -0.51
PDGFC-202ENST00000422544 PLBD2Q8NHP8 589 aa11.87□□□□□ -0.51
PDGFC-202ENST00000422544 ZNF428Q96B54 188 aa11.87□□□□□ -0.51
PDGFC-202ENST00000422544 RGL2O15211 777 aa11.86□□□□□ -0.51
PDGFC-202ENST00000422544 DDX58O95786 925 aaKnown RBP11.86□□□□□ -0.51
PDGFC-202ENST00000422544 RARSP54136 660 aaKnown RBP11.86□□□□□ -0.51
PDGFC-202ENST00000422544 DDR1Q08345 913 aa11.86□□□□□ -0.51
PDGFC-202ENST00000422544 FLIIQ13045 1269 aa11.86□□□□□ -0.51
PDGFC-202ENST00000422544 GIGYF2Q6Y7W6 1299 aaKnown RBP11.86□□□□□ -0.51
PDGFC-202ENST00000422544 RIC3Q7Z5B4 369 aa11.86□□□□□ -0.51
PDGFC-202ENST00000422544 SETDB2Q96T68 719 aa11.86□□□□□ -0.51
PDGFC-202ENST00000422544 NIP7Q9Y221 180 aaKnown RBP eCLIP11.86□□□□□ -0.51
PDGFC-202ENST00000422544 PARP3Q9Y6F1 533 aa11.86□□□□□ -0.51
PDGFC-202ENST00000422544 PI4KAP2A4QPH2 592 aa11.85□□□□□ -0.51
PDGFC-202ENST00000422544 POLRMTO00411 1230 aaKnown RBP11.85□□□□□ -0.51
PDGFC-202ENST00000422544 GPTP24298 496 aa11.85□□□□□ -0.51
PDGFC-202ENST00000422544 FKBP5Q13451 457 aaPredicted RBP11.85□□□□□ -0.51
PDGFC-202ENST00000422544 TCIRG1Q13488 830 aa11.85□□□□□ -0.51
PDGFC-202ENST00000422544 ALDH1L2Q3SY69 923 aa11.85□□□□□ -0.51
PDGFC-202ENST00000422544 KSR2Q6VAB6 950 aa11.85□□□□□ -0.51
PDGFC-202ENST00000422544 PI4KAP1Q8N8J0 262 aa11.85□□□□□ -0.51
PDGFC-202ENST00000422544 SMC4Q9NTJ3 1288 aa11.85□□□□□ -0.51
PDGFC-202ENST00000422544 KIF13BQ9NQT8 1826 aa11.84□□□□□ -0.51
PDGFC-202ENST00000422544 FAM177BA6PVY3 158 aa11.84□□□□□ -0.51
PDGFC-202ENST00000422544 SERPINB2P05120 415 aa11.84□□□□□ -0.51
PDGFC-202ENST00000422544 ZNF34Q8IZ26 560 aa11.84□□□□□ -0.51
PDGFC-202ENST00000422544 MAP3K2Q9Y2U5 619 aa11.84□□□□□ -0.51
PDGFC-202ENST00000422544 BRCA1P38398 1863 aaKnown RBP11.84□□□□□ -0.51
PDGFC-202ENST00000422544 C4AP0C0L4 1744 aa11.83□□□□□ -0.52
PDGFC-202ENST00000422544 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.52
PDGFC-202ENST00000422544 BCAR3O75815 825 aa11.83□□□□□ -0.52
PDGFC-202ENST00000422544 HSPA6P17066 643 aa11.83□□□□□ -0.52
PDGFC-202ENST00000422544 HSP90AB3PQ58FF7 597 aa11.83□□□□□ -0.52
PDGFC-202ENST00000422544 KLHL34Q8N239 644 aa11.83□□□□□ -0.52
PDGFC-202ENST00000422544 MYD88Q99836 296 aa11.83□□□□□ -0.52
PDGFC-202ENST00000422544 METTL22Q9BUU2 404 aaPredicted RBP11.83□□□□□ -0.52
PDGFC-202ENST00000422544 F6X3S4 739 aa11.82□□□□□ -0.52
PDGFC-202ENST00000422544 KIF3CO14782 793 aa11.82□□□□□ -0.52
PDGFC-202ENST00000422544 SUSD4Q5VX71 490 aa11.82□□□□□ -0.52
PDGFC-202ENST00000422544 NBPF5PQ86XG9 351 aaPredicted RBP11.82□□□□□ -0.52
PDGFC-202ENST00000422544 PELP1Q8IZL8 1130 aaKnown RBP11.82□□□□□ -0.52
PDGFC-202ENST00000422544 CCDC24Q8N4L8 307 aa11.82□□□□□ -0.52
PDGFC-202ENST00000422544 DNAJC5GQ8N7S2 189 aa11.82□□□□□ -0.52
PDGFC-202ENST00000422544 NOB1Q9ULX3 412 aaKnown RBP11.82□□□□□ -0.52
PDGFC-202ENST00000422544 UBN2Q6ZU65 1347 aa11.82□□□□□ -0.52
PDGFC-202ENST00000422544 N4BP2Q86UW6 1770 aaPredicted RBP11.82□□□□□ -0.52
PDGFC-202ENST00000422544 CARMIL3Q8ND23 1372 aa11.81□□□□□ -0.52
PDGFC-202ENST00000422544 WDR90Q96KV7 1748 aa11.81□□□□□ -0.52
PDGFC-202ENST00000422544 NPHP1O15259 732 aa11.81□□□□□ -0.52
PDGFC-202ENST00000422544 TPTE2Q6XPS3 522 aa11.81□□□□□ -0.52
PDGFC-202ENST00000422544 NLRP10Q86W26 655 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms