RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 STYK1Q6J9G0 422 aa16.73■□□□□ 0.27
UFD1-203ENST00000421968 DNAJC10Q8IXB1 793 aa16.73■□□□□ 0.27
UFD1-203ENST00000421968 HHIPL1Q96JK4 782 aa16.73■□□□□ 0.27
UFD1-203ENST00000421968 CUL9Q8IWT3 2517 aa16.73■□□□□ 0.27
UFD1-203ENST00000421968 CELF2O95319 508 aaKnown RBP16.72■□□□□ 0.27
UFD1-203ENST00000421968 FKBP4Q02790 459 aaKnown RBP eCLIP16.72■□□□□ 0.27
UFD1-203ENST00000421968 FZD9O00144 591 aa16.71■□□□□ 0.27
UFD1-203ENST00000421968 NOGQ13253 232 aa16.71■□□□□ 0.27
UFD1-203ENST00000421968 PRR5LQ6MZQ0 368 aa16.71■□□□□ 0.27
UFD1-203ENST00000421968 CTU1Q7Z7A3 348 aaKnown RBP16.71■□□□□ 0.27
UFD1-203ENST00000421968 NFATC2IPQ8NCF5 419 aa16.71■□□□□ 0.27
UFD1-203ENST00000421968 ZIC5Q96T25 663 aa16.71■□□□□ 0.27
UFD1-203ENST00000421968 GJA3Q9Y6H8 435 aa16.71■□□□□ 0.27
UFD1-203ENST00000421968 MASTLQ96GX5 879 aa16.7■□□□□ 0.26
UFD1-203ENST00000421968 HPS5Q9UPZ3 1129 aa16.7■□□□□ 0.26
UFD1-203ENST00000421968 NPHP1O15259 732 aa16.69■□□□□ 0.26
UFD1-203ENST00000421968 SRGNP10124 158 aa16.69■□□□□ 0.26
UFD1-203ENST00000421968 EPS15P42566 896 aa16.69■□□□□ 0.26
UFD1-203ENST00000421968 C7orf43Q8WVR3 580 aa16.69■□□□□ 0.26
UFD1-203ENST00000421968 ZBTB1Q9Y2K1 713 aa16.69■□□□□ 0.26
UFD1-203ENST00000421968 ST20-MTHFSA0A0A6YYL1 179 aa16.68■□□□□ 0.26
UFD1-203ENST00000421968 CYP19A1P11511 503 aaPredicted RBP16.68■□□□□ 0.26
UFD1-203ENST00000421968 MTHFSP49914 203 aa16.68■□□□□ 0.26
UFD1-203ENST00000421968 TBC1D9BQ66K14 1250 aa16.68■□□□□ 0.26
UFD1-203ENST00000421968 SAGE1Q9NXZ1 904 aa16.68■□□□□ 0.26
UFD1-203ENST00000421968 ARFGEF2Q9Y6D5 1785 aa16.68■□□□□ 0.26
UFD1-203ENST00000421968 IARSP41252 1262 aaKnown RBP16.67■□□□□ 0.26
UFD1-203ENST00000421968 AKAP4Q5JQC9 854 aa16.67■□□□□ 0.26
UFD1-203ENST00000421968 ZNF530Q6P9A1 599 aaPredicted RBP16.67■□□□□ 0.26
UFD1-203ENST00000421968 USP50Q70EL3 339 aaPredicted RBP16.67■□□□□ 0.26
UFD1-203ENST00000421968 CARD11Q9BXL7 1154 aa16.67■□□□□ 0.26
UFD1-203ENST00000421968 ZNF408Q9H9D4 720 aa16.67■□□□□ 0.26
UFD1-203ENST00000421968 EIF6P56537 245 aaKnown RBP16.66■□□□□ 0.26
UFD1-203ENST00000421968 PLEKHO1Q53GL0 409 aaPredicted RBP16.66■□□□□ 0.26
UFD1-203ENST00000421968 JDP2Q8WYK2 163 aa16.66■□□□□ 0.26
UFD1-203ENST00000421968 WASHC2AQ641Q2 1341 aa16.66■□□□□ 0.26
UFD1-203ENST00000421968 TRPA1O75762 1119 aa16.65■□□□□ 0.26
UFD1-203ENST00000421968 RTKN2Q8IZC4 609 aa16.65■□□□□ 0.26
UFD1-203ENST00000421968 CNBD1Q8NA66 436 aa16.65■□□□□ 0.26
UFD1-203ENST00000421968 SLC17A8Q8NDX2 589 aa16.65■□□□□ 0.26
UFD1-203ENST00000421968 CANXP27824 592 aaKnown RBP16.64■□□□□ 0.25
UFD1-203ENST00000421968 SCNN1DP51172 638 aa16.64■□□□□ 0.25
UFD1-203ENST00000421968 OLFM4Q6UX06 510 aa16.64■□□□□ 0.25
UFD1-203ENST00000421968 SYNE4Q8N205 404 aa16.64■□□□□ 0.25
UFD1-203ENST00000421968 ST5P78524 1137 aa16.63■□□□□ 0.25
UFD1-203ENST00000421968 GLIS2Q9BZE0 524 aaPredicted RBP16.63■□□□□ 0.25
UFD1-203ENST00000421968 RNF186Q9NXI6 227 aa16.63■□□□□ 0.25
UFD1-203ENST00000421968 KIF20BQ96Q89 1820 aa16.63■□□□□ 0.25
UFD1-203ENST00000421968 ANKRD26Q9UPS8 1709 aa16.62■□□□□ 0.25
UFD1-203ENST00000421968 C1orf141Q5JVX7 400 aa16.62■□□□□ 0.25
UFD1-203ENST00000421968 AKAP11Q9UKA4 1901 aa16.61■□□□□ 0.25
UFD1-203ENST00000421968 HUNKP57058 714 aa16.61■□□□□ 0.25
UFD1-203ENST00000421968 PKN2Q16513 984 aaKnown RBP16.61■□□□□ 0.25
UFD1-203ENST00000421968 TRIOBPQ9H2D6 2365 aa16.61■□□□□ 0.25
UFD1-203ENST00000421968 A0A087WZG4 1122 aa16.6■□□□□ 0.25
UFD1-203ENST00000421968 AMOTQ4VCS5 1084 aa16.6■□□□□ 0.25
UFD1-203ENST00000421968 SETDB2Q96T68 719 aa16.6■□□□□ 0.25
UFD1-203ENST00000421968 NPR1P16066 1061 aa16.59■□□□□ 0.25
UFD1-203ENST00000421968 KIF23Q02241 960 aaPredicted RBP16.59■□□□□ 0.25
UFD1-203ENST00000421968 EIF4A2Q14240 407 aaKnown RBP16.58■□□□□ 0.24
UFD1-203ENST00000421968 ADARB2Q9NS39 739 aaKnown RBP16.58■□□□□ 0.24
UFD1-203ENST00000421968 BCORQ6W2J9 1755 aa16.58■□□□□ 0.24
UFD1-203ENST00000421968 EIF5P55010 431 aaKnown RBP16.57■□□□□ 0.24
UFD1-203ENST00000421968 RGMBQ6NW40 437 aa16.57■□□□□ 0.24
UFD1-203ENST00000421968 HDAC9Q9UKV0 1011 aa16.57■□□□□ 0.24
UFD1-203ENST00000421968 SCN11AQ9UI33 1791 aa16.56■□□□□ 0.24
UFD1-203ENST00000421968 FAM155AB1AL88 458 aaPredicted RBP16.56■□□□□ 0.24
UFD1-203ENST00000421968 SLC39A6Q13433 755 aa16.56■□□□□ 0.24
UFD1-203ENST00000421968 TBC1D2BQ9UPU7 963 aa16.56■□□□□ 0.24
UFD1-203ENST00000421968 ZNF330Q9Y3S2 320 aaPredicted RBP16.56■□□□□ 0.24
UFD1-203ENST00000421968 CEP290O15078 2479 aa16.55■□□□□ 0.24
UFD1-203ENST00000421968 CCDC102AQ96A19 550 aa16.55■□□□□ 0.24
UFD1-203ENST00000421968 PSMD1Q99460 953 aa16.55■□□□□ 0.24
UFD1-203ENST00000421968 GPRC5DQ9NZD1 345 aa16.55■□□□□ 0.24
UFD1-203ENST00000421968 COLQQ9Y215 455 aaPredicted RBP16.55■□□□□ 0.24
UFD1-203ENST00000421968 COL4A5P29400 1685 aa16.54■□□□□ 0.24
UFD1-203ENST00000421968 CDC37L1Q7L3B6 337 aa16.54■□□□□ 0.24
UFD1-203ENST00000421968 LARGE2Q8N3Y3 721 aa16.54■□□□□ 0.24
UFD1-203ENST00000421968 A0A0C4DFX4 3053 aa16.54■□□□□ 0.24
UFD1-203ENST00000421968 SCN7AQ01118 1682 aa16.53■□□□□ 0.24
UFD1-203ENST00000421968 TESK2Q96S53 571 aa16.53■□□□□ 0.24
UFD1-203ENST00000421968 POLKQ9UBT6 870 aa16.53■□□□□ 0.24
UFD1-203ENST00000421968 PGAP2Q9UHJ9 254 aa16.53■□□□□ 0.24
UFD1-203ENST00000421968 STARD3NLO95772 234 aa16.52■□□□□ 0.24
UFD1-203ENST00000421968 ZNF157P51786 506 aaPredicted RBP16.52■□□□□ 0.24
UFD1-203ENST00000421968 VSIG10Q8N0Z9 540 aa16.52■□□□□ 0.24
UFD1-203ENST00000421968 CSRNP1Q96S65 589 aa16.52■□□□□ 0.24
UFD1-203ENST00000421968 SIN3AQ96ST3 1273 aa16.52■□□□□ 0.24
UFD1-203ENST00000421968 SLC52A2Q9HAB3 445 aa16.52■□□□□ 0.24
UFD1-203ENST00000421968 SZT2Q5T011 3432 aa16.51■□□□□ 0.23
UFD1-203ENST00000421968 NEUROD1Q13562 356 aa16.51■□□□□ 0.23
UFD1-203ENST00000421968 FBXO46Q6PJ61 603 aaPredicted RBP16.51■□□□□ 0.23
UFD1-203ENST00000421968 NBPF5PQ86XG9 351 aaPredicted RBP16.51■□□□□ 0.23
UFD1-203ENST00000421968 ALDH1B1P30837 517 aa16.5■□□□□ 0.23
UFD1-203ENST00000421968 ZC3H15Q8WU90 426 aaKnown RBP16.5■□□□□ 0.23
UFD1-203ENST00000421968 KIAA0100Q14667 2235 aaKnown RBP16.5■□□□□ 0.23
UFD1-203ENST00000421968 MKI67P46013 3256 aaKnown RBP16.5■□□□□ 0.23
UFD1-203ENST00000421968 KLRG2A4D1S0 409 aaPredicted RBP16.49■□□□□ 0.23
UFD1-203ENST00000421968 SLC24A1O60721 1099 aa16.49■□□□□ 0.23
UFD1-203ENST00000421968 NPM2Q86SE8 214 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms