RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 SULT6B1Q6IMI4 303 aa9.1□□□□□ -0.95
PMS1-208ENST00000421722 AEBP1Q8IUX7 1158 aa9.1□□□□□ -0.95
PMS1-208ENST00000421722 RTKN2Q8IZC4 609 aa9.1□□□□□ -0.95
PMS1-208ENST00000421722 BEGAINQ9BUH8 593 aa9.1□□□□□ -0.95
PMS1-208ENST00000421722 MAP2K2P36507 400 aa9.09□□□□□ -0.95
PMS1-208ENST00000421722 IL6STP40189 918 aaPredicted RBP9.09□□□□□ -0.95
PMS1-208ENST00000421722 EAPPQ56P03 285 aaPredicted RBP9.09□□□□□ -0.95
PMS1-208ENST00000421722 CNBD1Q8NA66 436 aa9.09□□□□□ -0.95
PMS1-208ENST00000421722 ZNF219Q9P2Y4 722 aaPredicted RBP9.09□□□□□ -0.95
PMS1-208ENST00000421722 KLRG2A4D1S0 409 aaPredicted RBP9.08□□□□□ -0.96
PMS1-208ENST00000421722 NPR1P16066 1061 aa9.08□□□□□ -0.96
PMS1-208ENST00000421722 CANXP27824 592 aaKnown RBP9.08□□□□□ -0.96
PMS1-208ENST00000421722 IL13P35225 146 aa9.08□□□□□ -0.96
PMS1-208ENST00000421722 BICDL1Q6ZP65 573 aa9.08□□□□□ -0.96
PMS1-208ENST00000421722 SETDB2Q96T68 719 aa9.08□□□□□ -0.96
PMS1-208ENST00000421722 BCORQ6W2J9 1755 aa9.08□□□□□ -0.96
PMS1-208ENST00000421722 FZD9O00144 591 aa9.08□□□□□ -0.96
PMS1-208ENST00000421722 GPC2Q8N158 579 aa9.08□□□□□ -0.96
PMS1-208ENST00000421722 CAPNS2Q96L46 248 aa9.08□□□□□ -0.96
PMS1-208ENST00000421722 LGR6Q9HBX8 967 aa9.08□□□□□ -0.96
PMS1-208ENST00000421722 DDX21Q9NR30 783 aaKnown RBP eCLIP9.08□□□□□ -0.96
PMS1-208ENST00000421722 ABT1Q9ULW3 272 aaKnown RBP9.08□□□□□ -0.96
PMS1-208ENST00000421722 ZNF541Q9H0D2 1346 aa9.08□□□□□ -0.96
PMS1-208ENST00000421722 SLC39A6Q13433 755 aa9.07□□□□□ -0.96
PMS1-208ENST00000421722 GRIPAP1Q4V328 841 aa9.07□□□□□ -0.96
PMS1-208ENST00000421722 HEG1Q9ULI3 1381 aa9.07□□□□□ -0.96
PMS1-208ENST00000421722 CAMTA2O94983 1202 aa9.07□□□□□ -0.96
PMS1-208ENST00000421722 TNNT2P45379 298 aaPredicted RBP9.07□□□□□ -0.96
PMS1-208ENST00000421722 CC2D2BQ6DHV5 1058 aa9.07□□□□□ -0.96
PMS1-208ENST00000421722 HHIPL1Q96JK4 782 aa9.07□□□□□ -0.96
PMS1-208ENST00000421722 TLL2Q9Y6L7 1015 aa9.07□□□□□ -0.96
PMS1-208ENST00000421722 TRPM7Q96QT4 1865 aa9.07□□□□□ -0.96
PMS1-208ENST00000421722 GOLGB1Q14789 3259 aaKnown RBP9.06□□□□□ -0.96
PMS1-208ENST00000421722 IARSP41252 1262 aaKnown RBP9.06□□□□□ -0.96
PMS1-208ENST00000421722 CLEC4GQ6UXB4 293 aa9.06□□□□□ -0.96
PMS1-208ENST00000421722 TTC5Q8N0Z6 440 aa9.06□□□□□ -0.96
PMS1-208ENST00000421722 LTBP1Q14766 1721 aa9.06□□□□□ -0.96
PMS1-208ENST00000421722 CACNA1SQ13698 1873 aa9.06□□□□□ -0.96
PMS1-208ENST00000421722 MAP1SQ66K74 1059 aaPredicted RBP9.06□□□□□ -0.96
PMS1-208ENST00000421722 USP50Q70EL3 339 aaPredicted RBP9.06□□□□□ -0.96
PMS1-208ENST00000421722 MORC1Q86VD1 984 aa9.06□□□□□ -0.96
PMS1-208ENST00000421722 GPR101Q96P66 508 aaPredicted RBP9.06□□□□□ -0.96
PMS1-208ENST00000421722 PSMD1Q99460 953 aa9.06□□□□□ -0.96
PMS1-208ENST00000421722 MCOLN1Q9GZU1 580 aa9.06□□□□□ -0.96
PMS1-208ENST00000421722 LMOD1P29536 600 aaPredicted RBP9.05□□□□□ -0.96
PMS1-208ENST00000421722 ALDH1B1P30837 517 aa9.05□□□□□ -0.96
PMS1-208ENST00000421722 SYNE4Q8N205 404 aa9.05□□□□□ -0.96
PMS1-208ENST00000421722 NPHP1O15259 732 aa9.05□□□□□ -0.96
PMS1-208ENST00000421722 EIF6P56537 245 aaKnown RBP9.05□□□□□ -0.96
PMS1-208ENST00000421722 NPM2Q86SE8 214 aaKnown RBP9.05□□□□□ -0.96
PMS1-208ENST00000421722 ZNF652Q9Y2D9 606 aa9.05□□□□□ -0.96
PMS1-208ENST00000421722 BRPF1P55201 1214 aaPredicted RBP9.04□□□□□ -0.96
PMS1-208ENST00000421722 ZNF277Q9NRM2 450 aaPredicted RBP9.04□□□□□ -0.96
PMS1-208ENST00000421722 TIMELESSQ9UNS1 1208 aa9.04□□□□□ -0.96
PMS1-208ENST00000421722 TBC1D2BQ9UPU7 963 aa9.04□□□□□ -0.96
PMS1-208ENST00000421722 SIPA1L3O60292 1781 aaPredicted RBP9.04□□□□□ -0.96
PMS1-208ENST00000421722 SNED1Q8TER0 1413 aa9.03□□□□□ -0.96
PMS1-208ENST00000421722 MTHFSDQ2M296 383 aaKnown RBP9.03□□□□□ -0.96
PMS1-208ENST00000421722 NBPF5PQ86XG9 351 aaPredicted RBP9.03□□□□□ -0.96
PMS1-208ENST00000421722 CCDC24Q8N4L8 307 aa9.03□□□□□ -0.96
PMS1-208ENST00000421722 JDP2Q8WYK2 163 aa9.03□□□□□ -0.96
PMS1-208ENST00000421722 FMNL2Q96PY5 1086 aa9.03□□□□□ -0.96
PMS1-208ENST00000421722 VPS33BQ9H267 617 aa9.03□□□□□ -0.96
PMS1-208ENST00000421722 RNF123Q5XPI4 1314 aa9.03□□□□□ -0.96
PMS1-208ENST00000421722 CYP4F22Q6NT55 531 aa9.02□□□□□ -0.96
PMS1-208ENST00000421722 ZNF790Q6PG37 636 aa9.02□□□□□ -0.96
PMS1-208ENST00000421722 TPTE2Q6XPS3 522 aa9.02□□□□□ -0.96
PMS1-208ENST00000421722 DZIP3Q86Y13 1208 aaKnown RBP9.02□□□□□ -0.96
PMS1-208ENST00000421722 ZNF496Q96IT1 587 aaPredicted RBP9.02□□□□□ -0.96
PMS1-208ENST00000421722 PANK3Q9H999 370 aa9.02□□□□□ -0.96
PMS1-208ENST00000421722 RIC1Q4ADV7 1423 aa9.02□□□□□ -0.97
PMS1-208ENST00000421722 DGKZQ13574 1117 aa9.01□□□□□ -0.97
PMS1-208ENST00000421722 CST9Q5W186 159 aa9.01□□□□□ -0.97
PMS1-208ENST00000421722 PAXIP1Q6ZW49 1069 aaPredicted RBP9.01□□□□□ -0.97
PMS1-208ENST00000421722 PGAP2Q9UHJ9 254 aa9.01□□□□□ -0.97
PMS1-208ENST00000421722 TEFQ10587 303 aa9.01□□□□□ -0.97
PMS1-208ENST00000421722 PPP4R3CPQ6ZMV5 832 aa9.01□□□□□ -0.97
PMS1-208ENST00000421722 GAS2L2Q8NHY3 880 aa9.01□□□□□ -0.97
PMS1-208ENST00000421722 ADARB2Q9NS39 739 aaKnown RBP9.01□□□□□ -0.97
PMS1-208ENST00000421722 PRPF38BQ5VTL8 546 aaKnown RBP9□□□□□ -0.97
PMS1-208ENST00000421722 SAGE1Q9NXZ1 904 aa9□□□□□ -0.97
PMS1-208ENST00000421722 IBTKQ9P2D0 1353 aaPredicted RBP9□□□□□ -0.97
PMS1-208ENST00000421722 CDHR2Q9BYE9 1310 aa9□□□□□ -0.97
PMS1-208ENST00000421722 AOC2O75106 756 aa9□□□□□ -0.97
PMS1-208ENST00000421722 A1BGP04217 495 aa9□□□□□ -0.97
PMS1-208ENST00000421722 SCNN1DP51172 638 aa9□□□□□ -0.97
PMS1-208ENST00000421722 GJA3Q9Y6H8 435 aa9□□□□□ -0.97
PMS1-208ENST00000421722 KIF7Q2M1P5 1343 aa8.99□□□□□ -0.97
PMS1-208ENST00000421722 GNAT3A8MTJ3 354 aa8.99□□□□□ -0.97
PMS1-208ENST00000421722 HOXA10P31260 410 aaPredicted RBP8.99□□□□□ -0.97
PMS1-208ENST00000421722 CRY2Q49AN0 593 aa8.99□□□□□ -0.97
PMS1-208ENST00000421722 SAPCD2Q86UD0 394 aa8.99□□□□□ -0.97
PMS1-208ENST00000421722 ZC3H15Q8WU90 426 aaKnown RBP8.99□□□□□ -0.97
PMS1-208ENST00000421722 CFAP44Q96MT7 982 aa8.99□□□□□ -0.97
PMS1-208ENST00000421722 NYXQ9GZU5 481 aa8.99□□□□□ -0.97
PMS1-208ENST00000421722 DIAPH1O60610 1272 aaKnown RBP8.98□□□□□ -0.97
PMS1-208ENST00000421722 EPS15P42566 896 aa8.98□□□□□ -0.97
PMS1-208ENST00000421722 NOGQ13253 232 aa8.98□□□□□ -0.97
PMS1-208ENST00000421722 IL17REQ8NFR9 667 aa8.98□□□□□ -0.97
PMS1-208ENST00000421722 ZNF330Q9Y3S2 320 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms