RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 XAGE3Q8WTP9 111 aa12.7□□□□□ -0.38
PTCH1-206ENST00000421141 CDC42BPGQ6DT37 1551 aa12.7□□□□□ -0.38
PTCH1-206ENST00000421141 BOLA2Q9H3K6 86 aa12.7□□□□□ -0.38
PTCH1-206ENST00000421141 RNF41Q9H4P4 317 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-206ENST00000421141 DDX17Q92841 729 aaKnown RBP12.7□□□□□ -0.38
PTCH1-206ENST00000421141 NOL7Q9UMY1 257 aaKnown RBP12.7□□□□□ -0.38
PTCH1-206ENST00000421141 NAP1L5Q96NT1 182 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-206ENST00000421141 NUTM1Q86Y26 1132 aa12.69□□□□□ -0.38
PTCH1-206ENST00000421141 QRICH2Q9H0J4 1663 aa12.69□□□□□ -0.38
PTCH1-206ENST00000421141 WDR78Q5VTH9 848 aa12.69□□□□□ -0.38
PTCH1-206ENST00000421141 MAP3K19Q56UN5 1328 aa12.69□□□□□ -0.38
PTCH1-206ENST00000421141 RBM17Q96I25 401 aaKnown RBP12.69□□□□□ -0.38
PTCH1-206ENST00000421141 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
PTCH1-206ENST00000421141 MX1P20591 662 aa12.69□□□□□ -0.38
PTCH1-206ENST00000421141 ODF2Q5BJF6 829 aa12.69□□□□□ -0.38
PTCH1-206ENST00000421141 MPHOSPH6Q99547 160 aaKnown RBP12.69□□□□□ -0.38
PTCH1-206ENST00000421141 MAP3K4Q9Y6R4 1608 aa12.68□□□□□ -0.38
PTCH1-206ENST00000421141 ATP2B1P20020 1258 aa12.68□□□□□ -0.38
PTCH1-206ENST00000421141 COPS6Q7L5N1 327 aa12.68□□□□□ -0.38
PTCH1-206ENST00000421141 AK9Q5TCS8 1911 aa12.68□□□□□ -0.38
PTCH1-206ENST00000421141 A0A0U1RQG5 324 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-206ENST00000421141 ZC3H12CQ9C0D7 883 aaKnown RBP12.68□□□□□ -0.38
PTCH1-206ENST00000421141 SYNMO15061 1565 aa12.68□□□□□ -0.38
PTCH1-206ENST00000421141 CCDC196A0A1B0GTZ2 297 aa12.68□□□□□ -0.38
PTCH1-206ENST00000421141 RXRBP28702 533 aa12.68□□□□□ -0.38
PTCH1-206ENST00000421141 CNBD1Q8NA66 436 aa12.68□□□□□ -0.38
PTCH1-206ENST00000421141 CABP5Q9NP86 173 aa12.68□□□□□ -0.38
PTCH1-206ENST00000421141 EYA3Q99504 573 aa12.68□□□□□ -0.38
PTCH1-206ENST00000421141 EHMT1Q9H9B1 1298 aa12.68□□□□□ -0.38
PTCH1-206ENST00000421141 PDE4BQ07343 736 aa12.67□□□□□ -0.38
PTCH1-206ENST00000421141 CT47A1Q5JQC4 288 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-206ENST00000421141 QTRT2Q9H974 415 aaKnown RBP12.67□□□□□ -0.38
PTCH1-206ENST00000421141 GRM8O00222 908 aa12.67□□□□□ -0.38
PTCH1-206ENST00000421141 RNMTO43148 476 aaKnown RBP12.67□□□□□ -0.38
PTCH1-206ENST00000421141 CCDC96Q2M329 555 aa12.67□□□□□ -0.38
PTCH1-206ENST00000421141 UQCRFS1P1P0C7P4 283 aa12.67□□□□□ -0.38
PTCH1-206ENST00000421141 CUL5Q93034 780 aa12.67□□□□□ -0.38
PTCH1-206ENST00000421141 AEBP1Q8IUX7 1158 aa12.67□□□□□ -0.38
PTCH1-206ENST00000421141 SDF4Q9BRK5 362 aa12.67□□□□□ -0.38
PTCH1-206ENST00000421141 CHMP5Q9NZZ3 219 aa12.67□□□□□ -0.38
PTCH1-206ENST00000421141 SOS1Q07889 1333 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-206ENST00000421141 MBD5Q9P267 1494 aa12.66□□□□□ -0.38
PTCH1-206ENST00000421141 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
PTCH1-206ENST00000421141 EYA1Q99502 592 aa12.66□□□□□ -0.38
PTCH1-206ENST00000421141 LAMC1P11047 1609 aa12.66□□□□□ -0.38
PTCH1-206ENST00000421141 KINO60870 393 aaKnown RBP12.66□□□□□ -0.38
PTCH1-206ENST00000421141 ZNF213O14771 459 aa12.66□□□□□ -0.38
PTCH1-206ENST00000421141 PLEKHH1Q9ULM0 1364 aa12.66□□□□□ -0.38
PTCH1-206ENST00000421141 CRNKL1Q9BZJ0 848 aaKnown RBP12.66□□□□□ -0.38
PTCH1-206ENST00000421141 STK3Q13188 491 aa12.66□□□□□ -0.38
PTCH1-206ENST00000421141 MTHFSDQ2M296 383 aaKnown RBP12.66□□□□□ -0.38
PTCH1-206ENST00000421141 CCDC70Q6NSX1 233 aa12.65□□□□□ -0.38
PTCH1-206ENST00000421141 KSR2Q6VAB6 950 aa12.65□□□□□ -0.38
PTCH1-206ENST00000421141 RANBP6O60518 1105 aaKnown RBP12.65□□□□□ -0.38
PTCH1-206ENST00000421141 ANKRD2Q9GZV1 360 aa12.65□□□□□ -0.38
PTCH1-206ENST00000421141 FLAD1Q8NFF5 587 aa12.65□□□□□ -0.38
PTCH1-206ENST00000421141 HMGB1P09429 215 aaKnown RBP12.65□□□□□ -0.38
PTCH1-206ENST00000421141 TRIM21P19474 475 aaKnown RBP12.65□□□□□ -0.38
PTCH1-206ENST00000421141 H0YIN7 160 aa12.65□□□□□ -0.38
PTCH1-206ENST00000421141 POLR3AO14802 1390 aaPredicted RBP12.65□□□□□ -0.39
PTCH1-206ENST00000421141 CTCFLQ8NI51 663 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-206ENST00000421141 CCDC8Q9H0W5 538 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-206ENST00000421141 LRRIQ1Q96JM4 1722 aa12.64□□□□□ -0.39
PTCH1-206ENST00000421141 STIM1Q13586 685 aa12.64□□□□□ -0.39
PTCH1-206ENST00000421141 EVI5LQ96CN4 794 aa12.64□□□□□ -0.39
PTCH1-206ENST00000421141 JAKMIP1Q96N16 626 aaKnown RBP12.64□□□□□ -0.39
PTCH1-206ENST00000421141 MAGEC2Q9UBF1 373 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-206ENST00000421141 ITSN1Q15811 1721 aa12.64□□□□□ -0.39
PTCH1-206ENST00000421141 CATIPQ7Z7H3 387 aa12.64□□□□□ -0.39
PTCH1-206ENST00000421141 PDRG1Q9NUG6 133 aa12.64□□□□□ -0.39
PTCH1-206ENST00000421141 PDIA4P13667 645 aaKnown RBP12.63□□□□□ -0.39
PTCH1-206ENST00000421141 STK38Q15208 465 aa12.63□□□□□ -0.39
PTCH1-206ENST00000421141 BMP2KQ9NSY1 1161 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-206ENST00000421141 CCDC87Q9NVE4 849 aa12.63□□□□□ -0.39
PTCH1-206ENST00000421141 MATR3P43243 847 aaKnown RBP eCLIP12.63□□□□□ -0.39
PTCH1-206ENST00000421141 TRIM27P14373 513 aa12.63□□□□□ -0.39
PTCH1-206ENST00000421141 PPP4R3AQ6IN85 833 aa12.63□□□□□ -0.39
PTCH1-206ENST00000421141 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-206ENST00000421141 CASTP20810 708 aaKnown RBP12.63□□□□□ -0.39
PTCH1-206ENST00000421141 ZNF790Q6PG37 636 aa12.63□□□□□ -0.39
PTCH1-206ENST00000421141 OFD1O75665 1012 aa12.63□□□□□ -0.39
PTCH1-206ENST00000421141 PRIM1P49642 420 aaKnown RBP12.63□□□□□ -0.39
PTCH1-206ENST00000421141 CCDC184Q52MB2 194 aa12.62□□□□□ -0.39
PTCH1-206ENST00000421141 PIBF1Q8WXW3 757 aa12.62□□□□□ -0.39
PTCH1-206ENST00000421141 GOLIM4O00461 696 aa12.62□□□□□ -0.39
PTCH1-206ENST00000421141 GRM1Q13255 1194 aa12.62□□□□□ -0.39
PTCH1-206ENST00000421141 PARP10Q53GL7 1025 aa12.62□□□□□ -0.39
PTCH1-206ENST00000421141 ZHX3Q9H4I2 956 aa12.62□□□□□ -0.39
PTCH1-206ENST00000421141 CEP131Q9UPN4 1083 aa12.62□□□□□ -0.39
PTCH1-206ENST00000421141 ANXA1P04083 346 aa12.62□□□□□ -0.39
PTCH1-206ENST00000421141 UNC13BO14795 1591 aa12.62□□□□□ -0.39
PTCH1-206ENST00000421141 KIF5BP33176 963 aa12.62□□□□□ -0.39
PTCH1-206ENST00000421141 A2ML1A8K2U0 1454 aa12.62□□□□□ -0.39
PTCH1-206ENST00000421141 IRS4O14654 1257 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-206ENST00000421141 ALDH1L1O75891 902 aa12.61□□□□□ -0.39
PTCH1-206ENST00000421141 TNNI2P48788 182 aa12.61□□□□□ -0.39
PTCH1-206ENST00000421141 SYCP1Q15431 976 aa12.61□□□□□ -0.39
PTCH1-206ENST00000421141 NSFL1CQ9UNZ2 370 aaKnown RBP12.61□□□□□ -0.39
PTCH1-206ENST00000421141 MYOM2P54296 1465 aa12.61□□□□□ -0.39
PTCH1-206ENST00000421141 RNF17Q9BXT8 1623 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms