RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 CARMIL3Q8ND23 1372 aa18.67■□□□□ 0.58
PTPN18-204ENST00000420717 ARFGEF2Q9Y6D5 1785 aa18.66■□□□□ 0.58
PTPN18-204ENST00000420717 E9PSI1 815 aa18.66■□□□□ 0.58
PTPN18-204ENST00000420717 GOLGA2Q08379 1002 aa18.66■□□□□ 0.58
PTPN18-204ENST00000420717 TSPYL6Q8N831 410 aa18.66■□□□□ 0.58
PTPN18-204ENST00000420717 CHPF2Q9P2E5 772 aa18.66■□□□□ 0.58
PTPN18-204ENST00000420717 ZNF652Q9Y2D9 606 aa18.66■□□□□ 0.58
PTPN18-204ENST00000420717 ZNF330Q9Y3S2 320 aaPredicted RBP18.66■□□□□ 0.58
PTPN18-204ENST00000420717 BRCA1P38398 1863 aaKnown RBP18.66■□□□□ 0.58
PTPN18-204ENST00000420717 DLEC1Q9Y238 1755 aa18.65■□□□□ 0.58
PTPN18-204ENST00000420717 SYT17Q9BSW7 474 aa18.65■□□□□ 0.58
PTPN18-204ENST00000420717 IBTKQ9P2D0 1353 aaPredicted RBP18.65■□□□□ 0.58
PTPN18-204ENST00000420717 MYL6BP14649 208 aa18.64■□□□□ 0.57
PTPN18-204ENST00000420717 TWISTNBQ3B726 338 aaPredicted RBP18.64■□□□□ 0.57
PTPN18-204ENST00000420717 KIF6Q6ZMV9 814 aa18.64■□□□□ 0.57
PTPN18-204ENST00000420717 TTLL7Q6ZT98 887 aa18.64■□□□□ 0.57
PTPN18-204ENST00000420717 TRMT2AQ8IZ69 625 aaKnown RBP18.64■□□□□ 0.57
PTPN18-204ENST00000420717 HYPKQ9NX55 129 aa18.64■□□□□ 0.57
PTPN18-204ENST00000420717 PARP3Q9Y6F1 533 aa18.64■□□□□ 0.57
PTPN18-204ENST00000420717 ANKRD31Q8N7Z5 1873 aa18.64■□□□□ 0.57
PTPN18-204ENST00000420717 SLFN5Q08AF3 891 aa18.63■□□□□ 0.57
PTPN18-204ENST00000420717 CCDC30Q5VVM6 783 aa18.63■□□□□ 0.57
PTPN18-204ENST00000420717 TBC1D9BQ66K14 1250 aa18.63■□□□□ 0.57
PTPN18-204ENST00000420717 PXDNLA1KZ92 1463 aa18.63■□□□□ 0.57
PTPN18-204ENST00000420717 RIC1Q4ADV7 1423 aa18.61■□□□□ 0.57
PTPN18-204ENST00000420717 VAMP4O75379 141 aa18.61■□□□□ 0.57
PTPN18-204ENST00000420717 ANXA1P04083 346 aa18.61■□□□□ 0.57
PTPN18-204ENST00000420717 EXOSC9Q06265 439 aaKnown RBP18.61■□□□□ 0.57
PTPN18-204ENST00000420717 GIGYF2Q6Y7W6 1299 aaKnown RBP18.61■□□□□ 0.57
PTPN18-204ENST00000420717 ELL2O00472 640 aaPredicted RBP18.6■□□□□ 0.57
PTPN18-204ENST00000420717 HLFQ16534 295 aa18.6■□□□□ 0.57
PTPN18-204ENST00000420717 COPS6Q7L5N1 327 aa18.6■□□□□ 0.57
PTPN18-204ENST00000420717 XAGE3Q8WTP9 111 aa18.6■□□□□ 0.57
PTPN18-204ENST00000420717 NECTIN2Q92692 538 aa18.6■□□□□ 0.57
PTPN18-204ENST00000420717 SERPINB2P05120 415 aa18.59■□□□□ 0.57
PTPN18-204ENST00000420717 SETDB2Q96T68 719 aa18.59■□□□□ 0.57
PTPN18-204ENST00000420717 N4BP2Q86UW6 1770 aaPredicted RBP18.59■□□□□ 0.57
PTPN18-204ENST00000420717 COL11A2P13942 1736 aaPredicted RBP18.59■□□□□ 0.57
PTPN18-204ENST00000420717 ZBED9Q6R2W3 1325 aa18.58■□□□□ 0.57
PTPN18-204ENST00000420717 TGFB2P61812 414 aa18.58■□□□□ 0.56
PTPN18-204ENST00000420717 ZNF34Q8IZ26 560 aa18.58■□□□□ 0.56
PTPN18-204ENST00000420717 PLBD2Q8NHP8 589 aa18.58■□□□□ 0.56
PTPN18-204ENST00000420717 NLGN2Q8NFZ4 835 aa18.57■□□□□ 0.56
PTPN18-204ENST00000420717 ZNF428Q96B54 188 aa18.57■□□□□ 0.56
PTPN18-204ENST00000420717 ZBTB3Q9H5J0 574 aa18.57■□□□□ 0.56
PTPN18-204ENST00000420717 RNF123Q5XPI4 1314 aa18.56■□□□□ 0.56
PTPN18-204ENST00000420717 UBN2Q6ZU65 1347 aa18.56■□□□□ 0.56
PTPN18-204ENST00000420717 LAMB2P55268 1798 aa18.56■□□□□ 0.56
PTPN18-204ENST00000420717 CT47B1P0C2W7 299 aaPredicted RBP18.56■□□□□ 0.56
PTPN18-204ENST00000420717 HSP90AB3PQ58FF7 597 aa18.56■□□□□ 0.56
PTPN18-204ENST00000420717 PRR5LQ6MZQ0 368 aa18.56■□□□□ 0.56
PTPN18-204ENST00000420717 STK31Q9BXU1 1019 aa18.56■□□□□ 0.56
PTPN18-204ENST00000420717 NIP7Q9Y221 180 aaKnown RBP eCLIP18.56■□□□□ 0.56
PTPN18-204ENST00000420717 ARFGEF1Q9Y6D6 1849 aa18.56■□□□□ 0.56
PTPN18-204ENST00000420717 TNRC6CQ9HCJ0 1690 aaKnown RBP18.55■□□□□ 0.56
PTPN18-204ENST00000420717 HNRNPUQ00839 825 aaKnown RBP eCLIP18.55■□□□□ 0.56
PTPN18-204ENST00000420717 PARP10Q53GL7 1025 aa18.55■□□□□ 0.56
PTPN18-204ENST00000420717 CNBD1Q8NA66 436 aa18.55■□□□□ 0.56
PTPN18-204ENST00000420717 CDCA7LQ96GN5 454 aa18.55■□□□□ 0.56
PTPN18-204ENST00000420717 BICDL1Q6ZP65 573 aa18.54■□□□□ 0.56
PTPN18-204ENST00000420717 ANKRD13DQ6ZTN6 518 aa18.54■□□□□ 0.56
PTPN18-204ENST00000420717 PHAXQ9H814 394 aaKnown RBP18.54■□□□□ 0.56
PTPN18-204ENST00000420717 PDZRN3Q9UPQ7 1066 aa18.54■□□□□ 0.56
PTPN18-204ENST00000420717 AIMP1Q12904 312 aaKnown RBP18.53■□□□□ 0.56
PTPN18-204ENST00000420717 TRIM28Q13263 835 aaKnown RBP18.53■□□□□ 0.56
PTPN18-204ENST00000420717 TCIRG1Q13488 830 aa18.53■□□□□ 0.56
PTPN18-204ENST00000420717 BRIP1Q9BX63 1249 aa18.53■□□□□ 0.56
PTPN18-204ENST00000420717 ADCY9O60503 1353 aa18.53■□□□□ 0.56
PTPN18-204ENST00000420717 KLRG2A4D1S0 409 aaPredicted RBP18.52■□□□□ 0.56
PTPN18-204ENST00000420717 NTSR2O95665 410 aa18.52■□□□□ 0.56
PTPN18-204ENST00000420717 DDX58O95786 925 aaKnown RBP18.52■□□□□ 0.56
PTPN18-204ENST00000420717 NBPF5PQ86XG9 351 aaPredicted RBP18.52■□□□□ 0.56
PTPN18-204ENST00000420717 ISCA1Q9BUE6 129 aa18.52■□□□□ 0.56
PTPN18-204ENST00000420717 NYXQ9GZU5 481 aa18.52■□□□□ 0.56
PTPN18-204ENST00000420717 KCNA3P22001 575 aa18.51■□□□□ 0.55
PTPN18-204ENST00000420717 ST5P78524 1137 aa18.51■□□□□ 0.55
PTPN18-204ENST00000420717 FLIIQ13045 1269 aa18.51■□□□□ 0.55
PTPN18-204ENST00000420717 TPTE2Q6XPS3 522 aa18.51■□□□□ 0.55
PTPN18-204ENST00000420717 KLHL34Q8N239 644 aa18.51■□□□□ 0.55
PTPN18-204ENST00000420717 DDX60Q8IY21 1712 aaKnown RBP18.51■□□□□ 0.55
PTPN18-204ENST00000420717 SLC4A2P04920 1241 aa18.5■□□□□ 0.55
PTPN18-204ENST00000420717 NLRP10Q86W26 655 aa18.5■□□□□ 0.55
PTPN18-204ENST00000420717 ABCC12Q96J65 1359 aa18.5■□□□□ 0.55
PTPN18-204ENST00000420717 GOLGB1Q14789 3259 aaKnown RBP18.5■□□□□ 0.55
PTPN18-204ENST00000420717 GPTP24298 496 aa18.49■□□□□ 0.55
PTPN18-204ENST00000420717 ALDH1L2Q3SY69 923 aa18.49■□□□□ 0.55
PTPN18-204ENST00000420717 KSR2Q6VAB6 950 aa18.49■□□□□ 0.55
PTPN18-204ENST00000420717 G2E3Q7L622 706 aa18.49■□□□□ 0.55
PTPN18-204ENST00000420717 DPEP1P16444 411 aa18.48■□□□□ 0.55
PTPN18-204ENST00000420717 PDE6BP35913 854 aa18.48■□□□□ 0.55
PTPN18-204ENST00000420717 SUSD4Q5VX71 490 aa18.48■□□□□ 0.55
PTPN18-204ENST00000420717 PPP1R42Q7Z4L9 355 aa18.48■□□□□ 0.55
PTPN18-204ENST00000420717 METTL22Q9BUU2 404 aaPredicted RBP18.48■□□□□ 0.55
PTPN18-204ENST00000420717 BRPF1P55201 1214 aaPredicted RBP18.47■□□□□ 0.55
PTPN18-204ENST00000420717 RIC3Q7Z5B4 369 aa18.47■□□□□ 0.55
PTPN18-204ENST00000420717 PI4KAP2A4QPH2 592 aa18.46■□□□□ 0.55
PTPN18-204ENST00000420717 TCERG1O14776 1098 aaKnown RBP18.46■□□□□ 0.55
PTPN18-204ENST00000420717 CRY2Q49AN0 593 aa18.46■□□□□ 0.55
PTPN18-204ENST00000420717 SLC10A5Q5PT55 438 aa18.46■□□□□ 0.55
PTPN18-204ENST00000420717 PI4KAP1Q8N8J0 262 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms