RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 FKBP4Q02790 459 aaKnown RBP eCLIP20.7■□□□□ 0.9
PTPA-213ENST00000419582 CCDC93Q567U6 631 aa20.7■□□□□ 0.9
PTPA-213ENST00000419582 BEGAINQ9BUH8 593 aa20.7■□□□□ 0.9
PTPA-213ENST00000419582 TEX13AQ9BXU3 409 aaPredicted RBP20.7■□□□□ 0.9
PTPA-213ENST00000419582 DDX21Q9NR30 783 aaKnown RBP eCLIP20.7■□□□□ 0.9
PTPA-213ENST00000419582 THSD7BQ9C0I4 1608 aa20.69■□□□□ 0.9
PTPA-213ENST00000419582 KLRG2A4D1S0 409 aaPredicted RBP20.69■□□□□ 0.9
PTPA-213ENST00000419582 FZD9O00144 591 aa20.69■□□□□ 0.9
PTPA-213ENST00000419582 MAP2K2P36507 400 aa20.69■□□□□ 0.9
PTPA-213ENST00000419582 SETDB2Q96T68 719 aa20.69■□□□□ 0.9
PTPA-213ENST00000419582 COL11A2P13942 1736 aaPredicted RBP20.68■□□□□ 0.9
PTPA-213ENST00000419582 CA12O43570 354 aa20.68■□□□□ 0.9
PTPA-213ENST00000419582 IL13P35225 146 aa20.68■□□□□ 0.9
PTPA-213ENST00000419582 IL6STP40189 918 aaPredicted RBP20.68■□□□□ 0.9
PTPA-213ENST00000419582 MAP1SQ66K74 1059 aaPredicted RBP20.68■□□□□ 0.9
PTPA-213ENST00000419582 GPC2Q8N158 579 aa20.68■□□□□ 0.9
PTPA-213ENST00000419582 CNBD1Q8NA66 436 aa20.68■□□□□ 0.9
PTPA-213ENST00000419582 GPR101Q96P66 508 aaPredicted RBP20.68■□□□□ 0.9
PTPA-213ENST00000419582 ABT1Q9ULW3 272 aaKnown RBP20.68■□□□□ 0.9
PTPA-213ENST00000419582 RTKN2Q8IZC4 609 aa20.67■□□□□ 0.9
PTPA-213ENST00000419582 CAPNS2Q96L46 248 aa20.67■□□□□ 0.9
PTPA-213ENST00000419582 ZNF541Q9H0D2 1346 aa20.67■□□□□ 0.9
PTPA-213ENST00000419582 ST5P78524 1137 aa20.66■□□□□ 0.9
PTPA-213ENST00000419582 ARFGEF2Q9Y6D5 1785 aa20.65■□□□□ 0.9
PTPA-213ENST00000419582 CCDC24Q8N4L8 307 aa20.65■□□□□ 0.9
PTPA-213ENST00000419582 NPR1P16066 1061 aa20.64■□□□□ 0.89
PTPA-213ENST00000419582 TBC1D2BQ9UPU7 963 aa20.64■□□□□ 0.89
PTPA-213ENST00000419582 CAMTA2O94983 1202 aa20.63■□□□□ 0.89
PTPA-213ENST00000419582 ZNF277Q9NRM2 450 aaPredicted RBP20.63■□□□□ 0.89
PTPA-213ENST00000419582 RNF123Q5XPI4 1314 aa20.62■□□□□ 0.89
PTPA-213ENST00000419582 CLEC4GQ6UXB4 293 aa20.62■□□□□ 0.89
PTPA-213ENST00000419582 MCOLN1Q9GZU1 580 aa20.62■□□□□ 0.89
PTPA-213ENST00000419582 TLL2Q9Y6L7 1015 aa20.62■□□□□ 0.89
PTPA-213ENST00000419582 SCN7AQ01118 1682 aa20.61■□□□□ 0.89
PTPA-213ENST00000419582 RGL2O15211 777 aa20.61■□□□□ 0.89
PTPA-213ENST00000419582 IARSP41252 1262 aaKnown RBP20.61■□□□□ 0.89
PTPA-213ENST00000419582 CST9Q5W186 159 aa20.61■□□□□ 0.89
PTPA-213ENST00000419582 HHIPL1Q96JK4 782 aa20.61■□□□□ 0.89
PTPA-213ENST00000419582 UBR2Q8IWV8 1755 aa20.61■□□□□ 0.89
PTPA-213ENST00000419582 CYP4F22Q6NT55 531 aa20.6■□□□□ 0.89
PTPA-213ENST00000419582 TTC5Q8N0Z6 440 aa20.6■□□□□ 0.89
PTPA-213ENST00000419582 PSMD1Q99460 953 aa20.6■□□□□ 0.89
PTPA-213ENST00000419582 HEG1Q9ULI3 1381 aa20.59■□□□□ 0.89
PTPA-213ENST00000419582 NPHP1O15259 732 aa20.59■□□□□ 0.89
PTPA-213ENST00000419582 ZNF496Q96IT1 587 aaPredicted RBP20.59■□□□□ 0.89
PTPA-213ENST00000419582 ALDH1B1P30837 517 aa20.58■□□□□ 0.89
PTPA-213ENST00000419582 ZNF790Q6PG37 636 aa20.58■□□□□ 0.89
PTPA-213ENST00000419582 USP50Q70EL3 339 aaPredicted RBP20.58■□□□□ 0.89
PTPA-213ENST00000419582 SYNE4Q8N205 404 aa20.58■□□□□ 0.89
PTPA-213ENST00000419582 BRPF1P55201 1214 aaPredicted RBP20.57■□□□□ 0.88
PTPA-213ENST00000419582 MTHFSDQ2M296 383 aaKnown RBP20.57■□□□□ 0.88
PTPA-213ENST00000419582 MORC1Q86VD1 984 aa20.57■□□□□ 0.88
PTPA-213ENST00000419582 JDP2Q8WYK2 163 aa20.57■□□□□ 0.88
PTPA-213ENST00000419582 SNED1Q8TER0 1413 aa20.56■□□□□ 0.88
PTPA-213ENST00000419582 CC2D2BQ6DHV5 1058 aa20.56■□□□□ 0.88
PTPA-213ENST00000419582 NPM2Q86SE8 214 aaKnown RBP20.56■□□□□ 0.88
PTPA-213ENST00000419582 GRIPAP1Q4V328 841 aa20.55■□□□□ 0.88
PTPA-213ENST00000419582 TPTE2Q6XPS3 522 aa20.55■□□□□ 0.88
PTPA-213ENST00000419582 SAPCD2Q86UD0 394 aa20.55■□□□□ 0.88
PTPA-213ENST00000419582 NBPF5PQ86XG9 351 aaPredicted RBP20.55■□□□□ 0.88
PTPA-213ENST00000419582 PANK3Q9H999 370 aa20.55■□□□□ 0.88
PTPA-213ENST00000419582 LMOD1P29536 600 aaPredicted RBP20.54■□□□□ 0.88
PTPA-213ENST00000419582 EIF6P56537 245 aaKnown RBP20.54■□□□□ 0.88
PTPA-213ENST00000419582 DZIP3Q86Y13 1208 aaKnown RBP20.54■□□□□ 0.88
PTPA-213ENST00000419582 LTBP1Q14766 1721 aa20.53■□□□□ 0.88
PTPA-213ENST00000419582 A1BGP04217 495 aa20.53■□□□□ 0.88
PTPA-213ENST00000419582 SCNN1DP51172 638 aa20.53■□□□□ 0.88
PTPA-213ENST00000419582 FMR1Q06787 632 aaKnown RBP eCLIP20.53■□□□□ 0.88
PTPA-213ENST00000419582 PAXIP1Q6ZW49 1069 aaPredicted RBP20.53■□□□□ 0.88
PTPA-213ENST00000419582 AOC2O75106 756 aa20.52■□□□□ 0.88
PTPA-213ENST00000419582 EPS15P42566 896 aa20.52■□□□□ 0.88
PTPA-213ENST00000419582 OLFM4Q6UX06 510 aa20.52■□□□□ 0.88
PTPA-213ENST00000419582 FMNL2Q96PY5 1086 aa20.52■□□□□ 0.88
PTPA-213ENST00000419582 TSKSQ9UJT2 592 aa20.52■□□□□ 0.88
PTPA-213ENST00000419582 DGKZQ13574 1117 aa20.51■□□□□ 0.87
PTPA-213ENST00000419582 CFAP44Q96MT7 982 aa20.51■□□□□ 0.87
PTPA-213ENST00000419582 PGAP2Q9UHJ9 254 aa20.51■□□□□ 0.87
PTPA-213ENST00000419582 ZNF652Q9Y2D9 606 aa20.51■□□□□ 0.87
PTPA-213ENST00000419582 ZNF330Q9Y3S2 320 aaPredicted RBP20.51■□□□□ 0.87
PTPA-213ENST00000419582 CACNA1SQ13698 1873 aa20.5■□□□□ 0.87
PTPA-213ENST00000419582 IL17REQ8NFR9 667 aa20.5■□□□□ 0.87
PTPA-213ENST00000419582 TRPM7Q96QT4 1865 aa20.5■□□□□ 0.87
PTPA-213ENST00000419582 TRAF5O00463 557 aa20.49■□□□□ 0.87
PTPA-213ENST00000419582 TEFQ10587 303 aa20.49■□□□□ 0.87
PTPA-213ENST00000419582 CRY2Q49AN0 593 aa20.49■□□□□ 0.87
PTPA-213ENST00000419582 PRPF38BQ5VTL8 546 aaKnown RBP20.49■□□□□ 0.87
PTPA-213ENST00000419582 HMOX1P09601 288 aa20.48■□□□□ 0.87
PTPA-213ENST00000419582 GRM1Q13255 1194 aa20.48■□□□□ 0.87
PTPA-213ENST00000419582 GJA3Q9Y6H8 435 aa20.48■□□□□ 0.87
PTPA-213ENST00000419582 CASP8AP2Q9UKL3 1982 aa20.47■□□□□ 0.87
PTPA-213ENST00000419582 ADARB2Q9NS39 739 aaKnown RBP20.47■□□□□ 0.87
PTPA-213ENST00000419582 TIMELESSQ9UNS1 1208 aa20.47■□□□□ 0.87
PTPA-213ENST00000419582 BCORQ6W2J9 1755 aa20.46■□□□□ 0.87
PTPA-213ENST00000419582 NOGQ13253 232 aa20.46■□□□□ 0.87
PTPA-213ENST00000419582 VPS33BQ9H267 617 aa20.46■□□□□ 0.87
PTPA-213ENST00000419582 GNAT3A8MTJ3 354 aa20.45■□□□□ 0.86
PTPA-213ENST00000419582 HOXA10P31260 410 aaPredicted RBP20.45■□□□□ 0.86
PTPA-213ENST00000419582 ZC3H15Q8WU90 426 aaKnown RBP20.45■□□□□ 0.86
PTPA-213ENST00000419582 CELF2O95319 508 aaKnown RBP20.44■□□□□ 0.86
PTPA-213ENST00000419582 GPRC5DQ9NZD1 345 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms