RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 AKAP4Q5JQC9 854 aa14.48□□□□□ -0.09
RAPGEF1-205ENST00000419442 MAP1SQ66K74 1059 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF1-205ENST00000419442 ABT1Q9ULW3 272 aaKnown RBP14.48□□□□□ -0.09
RAPGEF1-205ENST00000419442 CLEC11AQ9Y240 323 aa14.48□□□□□ -0.09
RAPGEF1-205ENST00000419442 CASP8AP2Q9UKL3 1982 aa14.47□□□□□ -0.09
RAPGEF1-205ENST00000419442 ECE1P42892 770 aa14.47□□□□□ -0.09
RAPGEF1-205ENST00000419442 SLC39A6Q13433 755 aa14.47□□□□□ -0.09
RAPGEF1-205ENST00000419442 MASTLQ96GX5 879 aa14.47□□□□□ -0.09
RAPGEF1-205ENST00000419442 CAPNS2Q96L46 248 aa14.47□□□□□ -0.09
RAPGEF1-205ENST00000419442 DDX21Q9NR30 783 aaKnown RBP eCLIP14.47□□□□□ -0.09
RAPGEF1-205ENST00000419442 CANXP27824 592 aaKnown RBP14.46□□□□□ -0.09
RAPGEF1-205ENST00000419442 CCDC93Q567U6 631 aa14.46□□□□□ -0.09
RAPGEF1-205ENST00000419442 CCDC24Q8N4L8 307 aa14.46□□□□□ -0.09
RAPGEF1-205ENST00000419442 BEGAINQ9BUH8 593 aa14.46□□□□□ -0.09
RAPGEF1-205ENST00000419442 LGR6Q9HBX8 967 aa14.46□□□□□ -0.09
RAPGEF1-205ENST00000419442 TNRC18O15417 2968 aaPredicted RBP14.46□□□□□ -0.1
RAPGEF1-205ENST00000419442 RNF123Q5XPI4 1314 aa14.45□□□□□ -0.1
RAPGEF1-205ENST00000419442 FZD9O00144 591 aa14.45□□□□□ -0.1
RAPGEF1-205ENST00000419442 TNNT2P45379 298 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF1-205ENST00000419442 FKBP4Q02790 459 aaKnown RBP eCLIP14.45□□□□□ -0.1
RAPGEF1-205ENST00000419442 SULT6B1Q6IMI4 303 aa14.45□□□□□ -0.1
RAPGEF1-205ENST00000419442 MCOLN1Q9GZU1 580 aa14.45□□□□□ -0.1
RAPGEF1-205ENST00000419442 RNMTO43148 476 aaKnown RBP14.44□□□□□ -0.1
RAPGEF1-205ENST00000419442 CNBD1Q8NA66 436 aa14.44□□□□□ -0.1
RAPGEF1-205ENST00000419442 GPR101Q96P66 508 aaPredicted RBP14.44□□□□□ -0.1
RAPGEF1-205ENST00000419442 SNED1Q8TER0 1413 aa14.43□□□□□ -0.1
RAPGEF1-205ENST00000419442 CA12O43570 354 aa14.43□□□□□ -0.1
RAPGEF1-205ENST00000419442 STARD3NLO95772 234 aa14.43□□□□□ -0.1
RAPGEF1-205ENST00000419442 MAP2K2P36507 400 aa14.43□□□□□ -0.1
RAPGEF1-205ENST00000419442 CYP4F22Q6NT55 531 aa14.43□□□□□ -0.1
RAPGEF1-205ENST00000419442 GPC2Q8N158 579 aa14.43□□□□□ -0.1
RAPGEF1-205ENST00000419442 PIAS4Q8N2W9 510 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF1-205ENST00000419442 ZNF277Q9NRM2 450 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF1-205ENST00000419442 SIPA1L3O60292 1781 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF1-205ENST00000419442 ST5P78524 1137 aa14.42□□□□□ -0.1
RAPGEF1-205ENST00000419442 KLRG2A4D1S0 409 aaPredicted RBP14.41□□□□□ -0.1
RAPGEF1-205ENST00000419442 CAMTA2O94983 1202 aa14.41□□□□□ -0.1
RAPGEF1-205ENST00000419442 IL13P35225 146 aa14.41□□□□□ -0.1
RAPGEF1-205ENST00000419442 IL6STP40189 918 aaPredicted RBP14.41□□□□□ -0.1
RAPGEF1-205ENST00000419442 CST9Q5W186 159 aa14.41□□□□□ -0.1
RAPGEF1-205ENST00000419442 SETDB2Q96T68 719 aa14.41□□□□□ -0.1
RAPGEF1-205ENST00000419442 TSKSQ9UJT2 592 aa14.41□□□□□ -0.1
RAPGEF1-205ENST00000419442 TLL2Q9Y6L7 1015 aa14.41□□□□□ -0.1
RAPGEF1-205ENST00000419442 NPR1P16066 1061 aa14.4□□□□□ -0.1
RAPGEF1-205ENST00000419442 IARSP41252 1262 aaKnown RBP14.4□□□□□ -0.1
RAPGEF1-205ENST00000419442 FMR1Q06787 632 aaKnown RBP eCLIP14.4□□□□□ -0.1
RAPGEF1-205ENST00000419442 RTKN2Q8IZC4 609 aa14.4□□□□□ -0.1
RAPGEF1-205ENST00000419442 TBC1D2BQ9UPU7 963 aa14.4□□□□□ -0.1
RAPGEF1-205ENST00000419442 COL4A5P29400 1685 aa14.39□□□□□ -0.11
RAPGEF1-205ENST00000419442 HEG1Q9ULI3 1381 aa14.39□□□□□ -0.11
RAPGEF1-205ENST00000419442 CFAP44Q96MT7 982 aa14.39□□□□□ -0.11
RAPGEF1-205ENST00000419442 AOC2O75106 756 aa14.38□□□□□ -0.11
RAPGEF1-205ENST00000419442 PAXIP1Q6ZW49 1069 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF1-205ENST00000419442 TEX13AQ9BXU3 409 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF1-205ENST00000419442 BRPF1P55201 1214 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF1-205ENST00000419442 DGKZQ13574 1117 aa14.37□□□□□ -0.11
RAPGEF1-205ENST00000419442 NCBP3Q53F19 620 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-205ENST00000419442 OLFM4Q6UX06 510 aa14.37□□□□□ -0.11
RAPGEF1-205ENST00000419442 SYNE4Q8N205 404 aa14.37□□□□□ -0.11
RAPGEF1-205ENST00000419442 ZNF496Q96IT1 587 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF1-205ENST00000419442 HHIPL1Q96JK4 782 aa14.37□□□□□ -0.11
RAPGEF1-205ENST00000419442 SCNN1DP51172 638 aa14.36□□□□□ -0.11
RAPGEF1-205ENST00000419442 GRM1Q13255 1194 aa14.36□□□□□ -0.11
RAPGEF1-205ENST00000419442 PRPF38BQ5VTL8 546 aaKnown RBP14.36□□□□□ -0.11
RAPGEF1-205ENST00000419442 SAPCD2Q86UD0 394 aa14.36□□□□□ -0.11
RAPGEF1-205ENST00000419442 PSMD1Q99460 953 aa14.36□□□□□ -0.11
RAPGEF1-205ENST00000419442 TRAF5O00463 557 aa14.35□□□□□ -0.11
RAPGEF1-205ENST00000419442 NPHP1O15259 732 aa14.35□□□□□ -0.11
RAPGEF1-205ENST00000419442 USP50Q70EL3 339 aaPredicted RBP14.35□□□□□ -0.11
RAPGEF1-205ENST00000419442 TTC5Q8N0Z6 440 aa14.35□□□□□ -0.11
RAPGEF1-205ENST00000419442 LMOD1P29536 600 aaPredicted RBP14.34□□□□□ -0.11
RAPGEF1-205ENST00000419442 EPS15P42566 896 aa14.34□□□□□ -0.11
RAPGEF1-205ENST00000419442 MTHFSDQ2M296 383 aaKnown RBP14.34□□□□□ -0.11
RAPGEF1-205ENST00000419442 CLEC4GQ6UXB4 293 aa14.34□□□□□ -0.11
RAPGEF1-205ENST00000419442 JDP2Q8WYK2 163 aa14.34□□□□□ -0.11
RAPGEF1-205ENST00000419442 RGL2O15211 777 aa14.33□□□□□ -0.12
RAPGEF1-205ENST00000419442 A1BGP04217 495 aa14.33□□□□□ -0.12
RAPGEF1-205ENST00000419442 EIF6P56537 245 aaKnown RBP14.33□□□□□ -0.12
RAPGEF1-205ENST00000419442 ZNF790Q6PG37 636 aa14.33□□□□□ -0.12
RAPGEF1-205ENST00000419442 NBPF5PQ86XG9 351 aaPredicted RBP14.33□□□□□ -0.12
RAPGEF1-205ENST00000419442 DZIP3Q86Y13 1208 aaKnown RBP14.33□□□□□ -0.12
RAPGEF1-205ENST00000419442 ZNF330Q9Y3S2 320 aaPredicted RBP14.33□□□□□ -0.12
RAPGEF1-205ENST00000419442 ALDH1B1P30837 517 aa14.32□□□□□ -0.12
RAPGEF1-205ENST00000419442 GJA3Q9Y6H8 435 aa14.32□□□□□ -0.12
RAPGEF1-205ENST00000419442 CC2D2BQ6DHV5 1058 aa14.31□□□□□ -0.12
RAPGEF1-205ENST00000419442 CIAPIN1Q6FI81 312 aa14.31□□□□□ -0.12
RAPGEF1-205ENST00000419442 MORC1Q86VD1 984 aa14.31□□□□□ -0.12
RAPGEF1-205ENST00000419442 TPTE2Q6XPS3 522 aa14.3□□□□□ -0.12
RAPGEF1-205ENST00000419442 NPM2Q86SE8 214 aaKnown RBP14.3□□□□□ -0.12
RAPGEF1-205ENST00000419442 PGAP2Q9UHJ9 254 aa14.3□□□□□ -0.12
RAPGEF1-205ENST00000419442 CELF2O95319 508 aaKnown RBP14.29□□□□□ -0.12
RAPGEF1-205ENST00000419442 HMOX1P09601 288 aa14.29□□□□□ -0.12
RAPGEF1-205ENST00000419442 SOX10P56693 466 aa14.29□□□□□ -0.12
RAPGEF1-205ENST00000419442 NOGQ13253 232 aa14.29□□□□□ -0.12
RAPGEF1-205ENST00000419442 CRY2Q49AN0 593 aa14.29□□□□□ -0.12
RAPGEF1-205ENST00000419442 FMNL2Q96PY5 1086 aa14.29□□□□□ -0.12
RAPGEF1-205ENST00000419442 PANK3Q9H999 370 aa14.29□□□□□ -0.12
RAPGEF1-205ENST00000419442 ADARB2Q9NS39 739 aaKnown RBP14.29□□□□□ -0.12
RAPGEF1-205ENST00000419442 ZNF652Q9Y2D9 606 aa14.29□□□□□ -0.12
RAPGEF1-205ENST00000419442 GRIPAP1Q4V328 841 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms