RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 METTL22Q9BUU2 404 aaPredicted RBP16.77■□□□□ 0.27
CCT6P3-201ENST00000419314 WDR17Q8IZU2 1322 aa16.76■□□□□ 0.27
CCT6P3-201ENST00000419314 GCKRQ14397 625 aa16.76■□□□□ 0.27
CCT6P3-201ENST00000419314 EXOC5O00471 708 aa16.76■□□□□ 0.27
CCT6P3-201ENST00000419314 TTLL7Q6ZT98 887 aa16.76■□□□□ 0.27
CCT6P3-201ENST00000419314 ADCY9O60503 1353 aa16.75■□□□□ 0.27
CCT6P3-201ENST00000419314 TRAK2O60296 914 aa16.75■□□□□ 0.27
CCT6P3-201ENST00000419314 NEURL1BA8MQ27 555 aa16.75■□□□□ 0.27
CCT6P3-201ENST00000419314 SNX21Q969T3 373 aa16.75■□□□□ 0.27
CCT6P3-201ENST00000419314 DDX11L8A8MPP1 907 aa16.75■□□□□ 0.27
CCT6P3-201ENST00000419314 SSFA2P28290 1259 aa16.75■□□□□ 0.27
CCT6P3-201ENST00000419314 KIF6Q6ZMV9 814 aa16.75■□□□□ 0.27
CCT6P3-201ENST00000419314 TNPO1Q92973 898 aaKnown RBP16.74■□□□□ 0.27
CCT6P3-201ENST00000419314 CHD2O14647 1828 aaKnown RBP16.74■□□□□ 0.27
CCT6P3-201ENST00000419314 MCTP1Q6DN14 999 aa16.74■□□□□ 0.27
CCT6P3-201ENST00000419314 ACSBG1Q96GR2 724 aa16.73■□□□□ 0.27
CCT6P3-201ENST00000419314 IGKV5-2P06315 115 aa16.73■□□□□ 0.27
CCT6P3-201ENST00000419314 DDX49Q9Y6V7 483 aaKnown RBP16.73■□□□□ 0.27
CCT6P3-201ENST00000419314 STARD3NLO95772 234 aa16.73■□□□□ 0.27
CCT6P3-201ENST00000419314 CWC25Q9NXE8 425 aaPredicted RBP16.73■□□□□ 0.27
CCT6P3-201ENST00000419314 NDUFB9Q9Y6M9 179 aa16.72■□□□□ 0.27
CCT6P3-201ENST00000419314 ADAMTSL3P82987 1691 aa16.72■□□□□ 0.27
CCT6P3-201ENST00000419314 ZKSCAN1P17029 563 aaPredicted RBP16.72■□□□□ 0.27
CCT6P3-201ENST00000419314 DNAJC10Q8IXB1 793 aa16.72■□□□□ 0.27
CCT6P3-201ENST00000419314 ASAP1Q9ULH1 1129 aa16.72■□□□□ 0.27
CCT6P3-201ENST00000419314 PRPF40BQ6NWY9 871 aaKnown RBP16.71■□□□□ 0.27
CCT6P3-201ENST00000419314 CARD10Q9BWT7 1032 aa16.71■□□□□ 0.27
CCT6P3-201ENST00000419314 OSBPL3Q9H4L5 887 aa16.71■□□□□ 0.27
CCT6P3-201ENST00000419314 POLA2Q14181 598 aa16.71■□□□□ 0.27
CCT6P3-201ENST00000419314 ANTXR1Q9H6X2 564 aa16.71■□□□□ 0.27
CCT6P3-201ENST00000419314 CCDC57Q2TAC2 916 aa16.7■□□□□ 0.26
CCT6P3-201ENST00000419314 ZGPATQ8N5A5 531 aaKnown RBP16.7■□□□□ 0.26
CCT6P3-201ENST00000419314 EAF2Q96CJ1 260 aaPredicted RBP16.7■□□□□ 0.26
CCT6P3-201ENST00000419314 PALD1Q9ULE6 856 aa16.7■□□□□ 0.26
CCT6P3-201ENST00000419314 NFAT5O94916 1531 aa16.7■□□□□ 0.26
CCT6P3-201ENST00000419314 DTNBO60941 627 aa16.7■□□□□ 0.26
CCT6P3-201ENST00000419314 EPHA10Q5JZY3 1008 aa16.7■□□□□ 0.26
CCT6P3-201ENST00000419314 GOLGA6L3A6NEY3 463 aa16.7■□□□□ 0.26
CCT6P3-201ENST00000419314 NUCB2P80303 420 aa16.7■□□□□ 0.26
CCT6P3-201ENST00000419314 TFCP2Q12800 502 aa16.7■□□□□ 0.26
CCT6P3-201ENST00000419314 PLBD2Q8NHP8 589 aa16.7■□□□□ 0.26
CCT6P3-201ENST00000419314 KIF2CQ99661 725 aa16.7■□□□□ 0.26
CCT6P3-201ENST00000419314 MEGF6O75095 1541 aa16.7■□□□□ 0.26
CCT6P3-201ENST00000419314 EDC3Q96F86 508 aaKnown RBP16.69■□□□□ 0.26
CCT6P3-201ENST00000419314 LMTK3Q96Q04 1460 aa16.69■□□□□ 0.26
CCT6P3-201ENST00000419314 NCAPD2Q15021 1401 aa16.69■□□□□ 0.26
CCT6P3-201ENST00000419314 NPHP1O15259 732 aa16.69■□□□□ 0.26
CCT6P3-201ENST00000419314 PDIA6Q15084 440 aa16.69■□□□□ 0.26
CCT6P3-201ENST00000419314 JAKMIP1Q96N16 626 aaKnown RBP16.69■□□□□ 0.26
CCT6P3-201ENST00000419314 ZNF594Q96JF6 807 aaPredicted RBP16.68■□□□□ 0.26
CCT6P3-201ENST00000419314 ERVV-2B6SEH9 535 aa16.68■□□□□ 0.26
CCT6P3-201ENST00000419314 CPA1P15085 419 aa16.68■□□□□ 0.26
CCT6P3-201ENST00000419314 CASTP20810 708 aaKnown RBP16.68■□□□□ 0.26
CCT6P3-201ENST00000419314 BRPF3Q9ULD4 1205 aa16.68■□□□□ 0.26
CCT6P3-201ENST00000419314 CIZ1Q9ULV3 898 aaPredicted RBP16.68■□□□□ 0.26
CCT6P3-201ENST00000419314 TBC1D2BQ9UPU7 963 aa16.68■□□□□ 0.26
CCT6P3-201ENST00000419314 FKBP4Q02790 459 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCT6P3-201ENST00000419314 FAM89AQ96GI7 184 aa16.68■□□□□ 0.26
CCT6P3-201ENST00000419314 TLR7Q9NYK1 1049 aaKnown RBP16.68■□□□□ 0.26
CCT6P3-201ENST00000419314 STAP2Q9UGK3 403 aa16.68■□□□□ 0.26
CCT6P3-201ENST00000419314 EVI5LQ96CN4 794 aa16.67■□□□□ 0.26
CCT6P3-201ENST00000419314 CEP126Q9P2H0 1117 aa16.67■□□□□ 0.26
CCT6P3-201ENST00000419314 TMX3Q96JJ7 454 aa16.67■□□□□ 0.26
CCT6P3-201ENST00000419314 NWD1Q149M9 1564 aa16.67■□□□□ 0.26
CCT6P3-201ENST00000419314 PRIM1P49642 420 aaKnown RBP16.67■□□□□ 0.26
CCT6P3-201ENST00000419314 DDX46Q7L014 1031 aaKnown RBP16.67■□□□□ 0.26
CCT6P3-201ENST00000419314 TIMM10P62072 90 aa16.66■□□□□ 0.26
CCT6P3-201ENST00000419314 SNRKQ9NRH2 765 aa16.66■□□□□ 0.26
CCT6P3-201ENST00000419314 GTF2E1P29083 439 aaPredicted RBP16.66■□□□□ 0.26
CCT6P3-201ENST00000419314 HSP90B1P14625 803 aaKnown RBP16.66■□□□□ 0.26
CCT6P3-201ENST00000419314 NBPF26B4DH59 902 aa16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 SASH1O94885 1247 aa16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 NBPF14Q5TI25 921 aa16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 NBPF10Q6P3W6 841 aaKnown RBP16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 NBPF15Q8N660 670 aa16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 ANP32BQ92688 251 aaKnown RBP16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 FAM227BQ96M60 508 aa16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 TCEANC2Q96MN5 208 aa16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 LTN1O94822 1766 aa16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 SOS2Q07890 1332 aaPredicted RBP16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 TTC41PQ6P2S7 1318 aa16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 PRPF40AO75400 957 aaKnown RBP16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 CNNM1Q9NRU3 951 aa16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 L1TD1Q5T7N2 865 aaKnown RBP16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 DBNDD2Q9BQY9 259 aa16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 TRMT112Q9UI30 125 aaKnown RBP16.65■□□□□ 0.26
CCT6P3-201ENST00000419314 KDM6AO15550 1401 aaPredicted RBP16.64■□□□□ 0.26
CCT6P3-201ENST00000419314 MCM2P49736 904 aa16.64■□□□□ 0.25
CCT6P3-201ENST00000419314 PI4K2BQ8TCG2 481 aa16.64■□□□□ 0.25
CCT6P3-201ENST00000419314 NMIQ13287 307 aaPredicted RBP16.64■□□□□ 0.25
CCT6P3-201ENST00000419314 RNF20Q5VTR2 975 aa16.64■□□□□ 0.25
CCT6P3-201ENST00000419314 PIGBQ92521 554 aa16.64■□□□□ 0.25
CCT6P3-201ENST00000419314 GOLIM4O00461 696 aa16.63■□□□□ 0.25
CCT6P3-201ENST00000419314 SGSM2O43147 1006 aa16.63■□□□□ 0.25
CCT6P3-201ENST00000419314 DDB1Q16531 1140 aa16.63■□□□□ 0.25
CCT6P3-201ENST00000419314 SMC3Q9UQE7 1217 aa16.63■□□□□ 0.25
CCT6P3-201ENST00000419314 HIP1O00291 1037 aa16.63■□□□□ 0.25
CCT6P3-201ENST00000419314 NGLY1Q96IV0 654 aa16.63■□□□□ 0.25
CCT6P3-201ENST00000419314 CYP46A1Q9Y6A2 500 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms