RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 C1orf115Q9H7X2 142 aa17.37■□□□□ 0.37
CHMP5-202ENST00000419016 IL6STP40189 918 aaPredicted RBP17.36■□□□□ 0.37
CHMP5-202ENST00000419016 COL5A3P25940 1745 aaPredicted RBP17.35■□□□□ 0.37
CHMP5-202ENST00000419016 GNAI3P08754 354 aa17.35■□□□□ 0.37
CHMP5-202ENST00000419016 CRKLP46109 303 aaKnown RBP17.35■□□□□ 0.37
CHMP5-202ENST00000419016 RWDD1Q9H446 243 aaPredicted RBP17.35■□□□□ 0.37
CHMP5-202ENST00000419016 CCDC87Q9NVE4 849 aa17.35■□□□□ 0.37
CHMP5-202ENST00000419016 EIF5P55010 431 aaKnown RBP17.35■□□□□ 0.37
CHMP5-202ENST00000419016 LY75O60449 1722 aa17.34■□□□□ 0.37
CHMP5-202ENST00000419016 CWF19L2Q2TBE0 894 aaKnown RBP17.34■□□□□ 0.37
CHMP5-202ENST00000419016 NUP188Q5SRE5 1749 aa17.34■□□□□ 0.37
CHMP5-202ENST00000419016 LINC00116Q8NCU8 138 aa17.34■□□□□ 0.37
CHMP5-202ENST00000419016 ARFGEF2Q9Y6D5 1785 aa17.34■□□□□ 0.37
CHMP5-202ENST00000419016 UTYO14607 1347 aa17.34■□□□□ 0.37
CHMP5-202ENST00000419016 NEURL1BA8MQ27 555 aa17.33■□□□□ 0.37
CHMP5-202ENST00000419016 MYH14Q7Z406 1995 aaKnown RBP17.33■□□□□ 0.37
CHMP5-202ENST00000419016 GNAI2P04899 355 aa17.33■□□□□ 0.36
CHMP5-202ENST00000419016 ANKRD44Q8N8A2 993 aa17.33■□□□□ 0.36
CHMP5-202ENST00000419016 NBPF7P0C2Y1 421 aaPredicted RBP17.32■□□□□ 0.36
CHMP5-202ENST00000419016 NEXNQ0ZGT2 675 aa17.32■□□□□ 0.36
CHMP5-202ENST00000419016 CEP85Q6P2H3 762 aa17.32■□□□□ 0.36
CHMP5-202ENST00000419016 RPAP2Q8IXW5 612 aaPredicted RBP17.32■□□□□ 0.36
CHMP5-202ENST00000419016 MYD88Q99836 296 aa17.32■□□□□ 0.36
CHMP5-202ENST00000419016 CNTNAP4Q9C0A0 1308 aa17.32■□□□□ 0.36
CHMP5-202ENST00000419016 TRIM37O94972 964 aa17.31■□□□□ 0.36
CHMP5-202ENST00000419016 KCNQ4P56696 695 aa17.31■□□□□ 0.36
CHMP5-202ENST00000419016 RC3H1Q5TC82 1133 aaKnown RBP17.31■□□□□ 0.36
CHMP5-202ENST00000419016 GCKRQ14397 625 aa17.31■□□□□ 0.36
CHMP5-202ENST00000419016 SMC5Q8IY18 1101 aa17.31■□□□□ 0.36
CHMP5-202ENST00000419016 ZBTB3Q9H5J0 574 aa17.31■□□□□ 0.36
CHMP5-202ENST00000419016 MAP3K15Q6ZN16 1313 aa17.31■□□□□ 0.36
CHMP5-202ENST00000419016 UBTFL1P0CB47 393 aaPredicted RBP17.3■□□□□ 0.36
CHMP5-202ENST00000419016 CCNL1Q9UK58 526 aaPredicted RBP17.3■□□□□ 0.36
CHMP5-202ENST00000419016 GRM8O00222 908 aa17.29■□□□□ 0.36
CHMP5-202ENST00000419016 TRIM28Q13263 835 aaKnown RBP17.29■□□□□ 0.36
CHMP5-202ENST00000419016 ISCA1Q9BUE6 129 aa17.29■□□□□ 0.36
CHMP5-202ENST00000419016 ERVV-1B6SEH8 477 aa17.29■□□□□ 0.36
CHMP5-202ENST00000419016 KIF6Q6ZMV9 814 aa17.29■□□□□ 0.36
CHMP5-202ENST00000419016 LRRFIP2Q9Y608 721 aaKnown RBP17.29■□□□□ 0.36
CHMP5-202ENST00000419016 TCIRG1Q13488 830 aa17.28■□□□□ 0.36
CHMP5-202ENST00000419016 GIGYF2Q6Y7W6 1299 aaKnown RBP17.28■□□□□ 0.36
CHMP5-202ENST00000419016 LRRC4BQ9NT99 713 aa17.28■□□□□ 0.36
CHMP5-202ENST00000419016 ZNF330Q9Y3S2 320 aaPredicted RBP17.28■□□□□ 0.36
CHMP5-202ENST00000419016 ATP5J2-PTCD1G3V325 749 aa17.28■□□□□ 0.36
CHMP5-202ENST00000419016 KAZALD1Q96I82 304 aa17.28■□□□□ 0.36
CHMP5-202ENST00000419016 C9orf78Q9NZ63 289 aaPredicted RBP17.28■□□□□ 0.36
CHMP5-202ENST00000419016 CASP7P55210 303 aa17.27■□□□□ 0.36
CHMP5-202ENST00000419016 ATP8B2P98198 1209 aa17.27■□□□□ 0.36
CHMP5-202ENST00000419016 HLFQ16534 295 aa17.27■□□□□ 0.36
CHMP5-202ENST00000419016 DZIP3Q86Y13 1208 aaKnown RBP17.27■□□□□ 0.36
CHMP5-202ENST00000419016 CCDC191Q8NCU4 936 aa17.26■□□□□ 0.35
CHMP5-202ENST00000419016 TBC1D2BQ9UPU7 963 aa17.26■□□□□ 0.35
CHMP5-202ENST00000419016 TAF1LQ8IZX4 1826 aa17.26■□□□□ 0.35
CHMP5-202ENST00000419016 COL15A1P39059 1388 aa17.26■□□□□ 0.35
CHMP5-202ENST00000419016 SLC27A3Q5K4L6 730 aa17.26■□□□□ 0.35
CHMP5-202ENST00000419016 PROM2Q8N271 834 aa17.26■□□□□ 0.35
CHMP5-202ENST00000419016 DCTPP1Q9H773 170 aa17.26■□□□□ 0.35
CHMP5-202ENST00000419016 H7C1W4 665 aa17.25■□□□□ 0.35
CHMP5-202ENST00000419016 PLSCR1O15162 318 aa17.25■□□□□ 0.35
CHMP5-202ENST00000419016 RPS6KA4O75676 772 aa17.25■□□□□ 0.35
CHMP5-202ENST00000419016 CAMTA2O94983 1202 aa17.25■□□□□ 0.35
CHMP5-202ENST00000419016 MTX1Q13505 466 aa17.25■□□□□ 0.35
CHMP5-202ENST00000419016 HDAC5Q9UQL6 1122 aa17.25■□□□□ 0.35
CHMP5-202ENST00000419016 GCC1Q96CN9 775 aa17.24■□□□□ 0.35
CHMP5-202ENST00000419016 CWC25Q9NXE8 425 aaPredicted RBP17.24■□□□□ 0.35
CHMP5-202ENST00000419016 PNMA6EA0A0J9YXQ4 647 aa17.24■□□□□ 0.35
CHMP5-202ENST00000419016 HSP90AB3PQ58FF7 597 aa17.24■□□□□ 0.35
CHMP5-202ENST00000419016 SKAP1Q86WV1 359 aa17.24■□□□□ 0.35
CHMP5-202ENST00000419016 SSH3Q8TE77 659 aa17.24■□□□□ 0.35
CHMP5-202ENST00000419016 SUCLG2Q96I99 432 aa17.24■□□□□ 0.35
CHMP5-202ENST00000419016 AFDNP55196 1824 aaKnown RBP17.23■□□□□ 0.35
CHMP5-202ENST00000419016 A0A087WZG4 1122 aa17.23■□□□□ 0.35
CHMP5-202ENST00000419016 RGL2O15211 777 aa17.23■□□□□ 0.35
CHMP5-202ENST00000419016 POLA2Q14181 598 aa17.23■□□□□ 0.35
CHMP5-202ENST00000419016 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
CHMP5-202ENST00000419016 ILDR1Q86SU0 546 aaPredicted RBP17.23■□□□□ 0.35
CHMP5-202ENST00000419016 PDZRN3Q9UPQ7 1066 aa17.23■□□□□ 0.35
CHMP5-202ENST00000419016 C4BP0C0L5 1744 aa17.23■□□□□ 0.35
CHMP5-202ENST00000419016 HMMRO75330 724 aa17.22■□□□□ 0.35
CHMP5-202ENST00000419016 ZNF34Q8IZ26 560 aa17.22■□□□□ 0.35
CHMP5-202ENST00000419016 ARXQ96QS3 562 aa17.22■□□□□ 0.35
CHMP5-202ENST00000419016 NUCB1Q02818 461 aa17.22■□□□□ 0.35
CHMP5-202ENST00000419016 PPP1R42Q7Z4L9 355 aa17.22■□□□□ 0.35
CHMP5-202ENST00000419016 AMIGO3Q86WK7 504 aa17.22■□□□□ 0.35
CHMP5-202ENST00000419016 TXNRD1Q16881 649 aa17.21■□□□□ 0.35
CHMP5-202ENST00000419016 UBE3BQ7Z3V4 1068 aa17.21■□□□□ 0.35
CHMP5-202ENST00000419016 NLRP10Q86W26 655 aa17.21■□□□□ 0.35
CHMP5-202ENST00000419016 NUP98P52948 1817 aa17.21■□□□□ 0.35
CHMP5-202ENST00000419016 GNPATO15228 680 aa17.2■□□□□ 0.34
CHMP5-202ENST00000419016 EPHA10Q5JZY3 1008 aa17.2■□□□□ 0.34
CHMP5-202ENST00000419016 BICC1Q9H694 974 aaKnown RBP17.2■□□□□ 0.34
CHMP5-202ENST00000419016 TNS1Q9HBL0 1735 aaKnown RBP17.2■□□□□ 0.34
CHMP5-202ENST00000419016 ANKRD36CQ5JPF3 1778 aa17.2■□□□□ 0.34
CHMP5-202ENST00000419016 APBA3O96018 575 aa17.2■□□□□ 0.34
CHMP5-202ENST00000419016 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
CHMP5-202ENST00000419016 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
CHMP5-202ENST00000419016 SMIM5Q71RC9 77 aa17.2■□□□□ 0.34
CHMP5-202ENST00000419016 JARID2Q92833 1246 aaPredicted RBP17.2■□□□□ 0.34
CHMP5-202ENST00000419016 RTCBQ9Y3I0 505 aaKnown RBP17.2■□□□□ 0.34
CHMP5-202ENST00000419016 BCORQ6W2J9 1755 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms