RNA–Protein interactions for RNA: ENST00000418897.5

DDX39B-204, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-204ENST00000418897 COL15A1P39059 1388 aa16.56■□□□□ 0.24
DDX39B-204ENST00000418897 LMOD1P29536 600 aaPredicted RBP16.56■□□□□ 0.24
DDX39B-204ENST00000418897 PRPF40BQ6NWY9 871 aaKnown RBP16.56■□□□□ 0.24
DDX39B-204ENST00000418897 GPC2Q8N158 579 aa16.56■□□□□ 0.24
DDX39B-204ENST00000418897 ANKRD31Q8N7Z5 1873 aa16.56■□□□□ 0.24
DDX39B-204ENST00000418897 SLX4Q8IY92 1834 aa16.55■□□□□ 0.24
DDX39B-204ENST00000418897 NPHP1O15259 732 aa16.55■□□□□ 0.24
DDX39B-204ENST00000418897 AMOTQ4VCS5 1084 aa16.55■□□□□ 0.24
DDX39B-204ENST00000418897 CCDC93Q567U6 631 aa16.55■□□□□ 0.24
DDX39B-204ENST00000418897 TBC1D9BQ66K14 1250 aa16.55■□□□□ 0.24
DDX39B-204ENST00000418897 CIAPIN1Q6FI81 312 aa16.55■□□□□ 0.24
DDX39B-204ENST00000418897 PRR5LQ6MZQ0 368 aa16.55■□□□□ 0.24
DDX39B-204ENST00000418897 C7orf43Q8WVR3 580 aa16.55■□□□□ 0.24
DDX39B-204ENST00000418897 HHIPL1Q96JK4 782 aa16.55■□□□□ 0.24
DDX39B-204ENST00000418897 ADAMTSL1Q8N6G6 1762 aa16.55■□□□□ 0.24
DDX39B-204ENST00000418897 THSD7BQ9C0I4 1608 aa16.55■□□□□ 0.24
DDX39B-204ENST00000418897 FKBP4Q02790 459 aaKnown RBP eCLIP16.54■□□□□ 0.24
DDX39B-204ENST00000418897 SLC39A6Q13433 755 aa16.54■□□□□ 0.24
DDX39B-204ENST00000418897 SAPCD2Q86UD0 394 aa16.54■□□□□ 0.24
DDX39B-204ENST00000418897 AEBP1Q8IUX7 1158 aa16.54■□□□□ 0.24
DDX39B-204ENST00000418897 MASTLQ96GX5 879 aa16.54■□□□□ 0.24
DDX39B-204ENST00000418897 CASP8AP2Q9UKL3 1982 aa16.54■□□□□ 0.24
DDX39B-204ENST00000418897 FZD9O00144 591 aa16.53■□□□□ 0.24
DDX39B-204ENST00000418897 CANXP27824 592 aaKnown RBP16.53■□□□□ 0.24
DDX39B-204ENST00000418897 TNNT2P45379 298 aaPredicted RBP16.53■□□□□ 0.24
DDX39B-204ENST00000418897 LGR6Q9HBX8 967 aa16.53■□□□□ 0.24
DDX39B-204ENST00000418897 ZNF277Q9NRM2 450 aaPredicted RBP16.53■□□□□ 0.24
DDX39B-204ENST00000418897 TRAF5O00463 557 aa16.52■□□□□ 0.24
DDX39B-204ENST00000418897 SRGNP10124 158 aa16.52■□□□□ 0.24
DDX39B-204ENST00000418897 C1orf141Q5JVX7 400 aa16.52■□□□□ 0.24
DDX39B-204ENST00000418897 COL11A2P13942 1736 aaPredicted RBP16.52■□□□□ 0.24
DDX39B-204ENST00000418897 EIF5P55010 431 aaKnown RBP16.51■□□□□ 0.23
DDX39B-204ENST00000418897 NOGQ13253 232 aa16.51■□□□□ 0.23
DDX39B-204ENST00000418897 USP50Q70EL3 339 aaPredicted RBP16.51■□□□□ 0.23
DDX39B-204ENST00000418897 RTKN2Q8IZC4 609 aa16.51■□□□□ 0.23
DDX39B-204ENST00000418897 JDP2Q8WYK2 163 aa16.51■□□□□ 0.23
DDX39B-204ENST00000418897 LTBP1Q14766 1721 aa16.5■□□□□ 0.23
DDX39B-204ENST00000418897 A0A087WZG4 1122 aa16.5■□□□□ 0.23
DDX39B-204ENST00000418897 CELF2O95319 508 aaKnown RBP16.5■□□□□ 0.23
DDX39B-204ENST00000418897 OLFM4Q6UX06 510 aa16.5■□□□□ 0.23
DDX39B-204ENST00000418897 GJA3Q9Y6H8 435 aa16.5■□□□□ 0.23
DDX39B-204ENST00000418897 EIF6P56537 245 aaKnown RBP16.49■□□□□ 0.23
DDX39B-204ENST00000418897 ST5P78524 1137 aa16.49■□□□□ 0.23
DDX39B-204ENST00000418897 SLC52A2Q9HAB3 445 aa16.49■□□□□ 0.23
DDX39B-204ENST00000418897 IARSP41252 1262 aaKnown RBP16.48■□□□□ 0.23
DDX39B-204ENST00000418897 AKAP4Q5JQC9 854 aa16.48■□□□□ 0.23
DDX39B-204ENST00000418897 CNBD1Q8NA66 436 aa16.48■□□□□ 0.23
DDX39B-204ENST00000418897 SAGE1Q9NXZ1 904 aa16.48■□□□□ 0.23
DDX39B-204ENST00000418897 TBC1D2BQ9UPU7 963 aa16.48■□□□□ 0.23
DDX39B-204ENST00000418897 EPS15P42566 896 aa16.47■□□□□ 0.23
DDX39B-204ENST00000418897 CTU1Q7Z7A3 348 aaKnown RBP16.47■□□□□ 0.23
DDX39B-204ENST00000418897 SETDB2Q96T68 719 aa16.47■□□□□ 0.23
DDX39B-204ENST00000418897 CACNA1SQ13698 1873 aa16.46■□□□□ 0.23
DDX39B-204ENST00000418897 DLL1O00548 723 aa16.46■□□□□ 0.23
DDX39B-204ENST00000418897 SYNE4Q8N205 404 aa16.46■□□□□ 0.23
DDX39B-204ENST00000418897 SULT6B1Q6IMI4 303 aa16.45■□□□□ 0.22
DDX39B-204ENST00000418897 NPR1P16066 1061 aa16.44■□□□□ 0.22
DDX39B-204ENST00000418897 VSIG10Q8N0Z9 540 aa16.44■□□□□ 0.22
DDX39B-204ENST00000418897 HPS5Q9UPZ3 1129 aa16.44■□□□□ 0.22
DDX39B-204ENST00000418897 SCN11AQ9UI33 1791 aa16.43■□□□□ 0.22
DDX39B-204ENST00000418897 RNMTO43148 476 aaKnown RBP16.43■□□□□ 0.22
DDX39B-204ENST00000418897 PKN2Q16513 984 aaKnown RBP16.43■□□□□ 0.22
DDX39B-204ENST00000418897 ZNF408Q9H9D4 720 aa16.43■□□□□ 0.22
DDX39B-204ENST00000418897 TRPA1O75762 1119 aa16.42■□□□□ 0.22
DDX39B-204ENST00000418897 STARD3NLO95772 234 aa16.42■□□□□ 0.22
DDX39B-204ENST00000418897 FXR1P51114 621 aaKnown RBP eCLIP16.42■□□□□ 0.22
DDX39B-204ENST00000418897 SCNN1DP51172 638 aa16.42■□□□□ 0.22
DDX39B-204ENST00000418897 CDCA8Q53HL2 280 aa16.42■□□□□ 0.22
DDX39B-204ENST00000418897 NPM2Q86SE8 214 aaKnown RBP16.42■□□□□ 0.22
DDX39B-204ENST00000418897 ZIC5Q96T25 663 aa16.42■□□□□ 0.22
DDX39B-204ENST00000418897 ADARB2Q9NS39 739 aaKnown RBP16.41■□□□□ 0.22
DDX39B-204ENST00000418897 CAMTA2O94983 1202 aa16.4■□□□□ 0.22
DDX39B-204ENST00000418897 ALDH1B1P30837 517 aa16.4■□□□□ 0.22
DDX39B-204ENST00000418897 HUNKP57058 714 aa16.4■□□□□ 0.22
DDX39B-204ENST00000418897 RNF186Q9NXI6 227 aa16.4■□□□□ 0.22
DDX39B-204ENST00000418897 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
DDX39B-204ENST00000418897 KLRG2A4D1S0 409 aaPredicted RBP16.39■□□□□ 0.21
DDX39B-204ENST00000418897 CCDC102AQ96A19 550 aa16.39■□□□□ 0.21
DDX39B-204ENST00000418897 PSMD1Q99460 953 aa16.39■□□□□ 0.21
DDX39B-204ENST00000418897 GLIS2Q9BZE0 524 aaPredicted RBP16.39■□□□□ 0.21
DDX39B-204ENST00000418897 ARFGEF2Q9Y6D5 1785 aa16.38■□□□□ 0.21
DDX39B-204ENST00000418897 COL4A5P29400 1685 aa16.38■□□□□ 0.21
DDX39B-204ENST00000418897 A1BGP04217 495 aa16.38■□□□□ 0.21
DDX39B-204ENST00000418897 KIF23Q02241 960 aaPredicted RBP16.37■□□□□ 0.21
DDX39B-204ENST00000418897 RGMBQ6NW40 437 aa16.37■□□□□ 0.21
DDX39B-204ENST00000418897 CDC37L1Q7L3B6 337 aa16.37■□□□□ 0.21
DDX39B-204ENST00000418897 NBPF5PQ86XG9 351 aaPredicted RBP16.37■□□□□ 0.21
DDX39B-204ENST00000418897 ZNF496Q96IT1 587 aaPredicted RBP16.37■□□□□ 0.21
DDX39B-204ENST00000418897 TRPM7Q96QT4 1865 aa16.37■□□□□ 0.21
DDX39B-204ENST00000418897 IL13P35225 146 aa16.36■□□□□ 0.21
DDX39B-204ENST00000418897 IL6STP40189 918 aaPredicted RBP16.36■□□□□ 0.21
DDX39B-204ENST00000418897 LARGE2Q8N3Y3 721 aa16.36■□□□□ 0.21
DDX39B-204ENST00000418897 SLC17A8Q8NDX2 589 aa16.36■□□□□ 0.21
DDX39B-204ENST00000418897 HDAC9Q9UKV0 1011 aa16.36■□□□□ 0.21
DDX39B-204ENST00000418897 MRC1P22897 1456 aa16.35■□□□□ 0.21
DDX39B-204ENST00000418897 CC2D2BQ6DHV5 1058 aa16.35■□□□□ 0.21
DDX39B-204ENST00000418897 ZC3H15Q8WU90 426 aaKnown RBP16.35■□□□□ 0.21
DDX39B-204ENST00000418897 GPRC5DQ9NZD1 345 aa16.35■□□□□ 0.21
DDX39B-204ENST00000418897 PGAP2Q9UHJ9 254 aa16.35■□□□□ 0.21
DDX39B-204ENST00000418897 TEX13AQ9BXU3 409 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms