RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 NBPF5PQ86XG9 351 aaPredicted RBP18.69■□□□□ 0.58
LINC01006-202ENST00000418309 RRAGCQ9HB90 399 aa18.69■□□□□ 0.58
LINC01006-202ENST00000418309 NBPF26B4DH59 902 aa18.68■□□□□ 0.58
LINC01006-202ENST00000418309 C21orf2O43822 256 aa18.68■□□□□ 0.58
LINC01006-202ENST00000418309 NBPF10Q6P3W6 841 aaKnown RBP18.68■□□□□ 0.58
LINC01006-202ENST00000418309 NBPF15Q8N660 670 aa18.68■□□□□ 0.58
LINC01006-202ENST00000418309 NGEFQ8N5V2 710 aa18.67■□□□□ 0.58
LINC01006-202ENST00000418309 THUMPD2Q9BTF0 503 aaKnown RBP18.67■□□□□ 0.58
LINC01006-202ENST00000418309 BCORQ6W2J9 1755 aa18.67■□□□□ 0.58
LINC01006-202ENST00000418309 CCDC88AQ3V6T2 1871 aa18.67■□□□□ 0.58
LINC01006-202ENST00000418309 APLP1P51693 650 aa18.66■□□□□ 0.58
LINC01006-202ENST00000418309 RALBP1Q15311 655 aa18.66■□□□□ 0.58
LINC01006-202ENST00000418309 CNKSR1Q969H4 720 aa18.66■□□□□ 0.58
LINC01006-202ENST00000418309 NIP7Q9Y221 180 aaKnown RBP eCLIP18.66■□□□□ 0.58
LINC01006-202ENST00000418309 FAM177BA6PVY3 158 aa18.65■□□□□ 0.58
LINC01006-202ENST00000418309 NFKBIEO00221 500 aa18.65■□□□□ 0.58
LINC01006-202ENST00000418309 PRELPP51888 382 aa18.65■□□□□ 0.58
LINC01006-202ENST00000418309 DDX10Q13206 875 aaKnown RBP18.65■□□□□ 0.58
LINC01006-202ENST00000418309 TPTE2Q6XPS3 522 aa18.65■□□□□ 0.58
LINC01006-202ENST00000418309 RBM46Q8TBY0 533 aaKnown RBP18.65■□□□□ 0.58
LINC01006-202ENST00000418309 ZC3H4Q9UPT8 1303 aaKnown RBP18.65■□□□□ 0.58
LINC01006-202ENST00000418309 SRGNP10124 158 aa18.64■□□□□ 0.57
LINC01006-202ENST00000418309 EIF4A1P60842 406 aaKnown RBP18.64■□□□□ 0.57
LINC01006-202ENST00000418309 STYK1Q6J9G0 422 aa18.64■□□□□ 0.57
LINC01006-202ENST00000418309 MASTLQ96GX5 879 aa18.64■□□□□ 0.57
LINC01006-202ENST00000418309 RRP7AQ9Y3A4 280 aaKnown RBP18.64■□□□□ 0.57
LINC01006-202ENST00000418309 GLTPD2A6NH11 291 aa18.63■□□□□ 0.57
LINC01006-202ENST00000418309 GTF2E1P29083 439 aaPredicted RBP18.63■□□□□ 0.57
LINC01006-202ENST00000418309 HLFQ16534 295 aa18.63■□□□□ 0.57
LINC01006-202ENST00000418309 COL11A2P13942 1736 aaPredicted RBP18.63■□□□□ 0.57
LINC01006-202ENST00000418309 CEP350Q5VT06 3117 aa18.63■□□□□ 0.57
LINC01006-202ENST00000418309 RIPK4P57078 832 aa18.62■□□□□ 0.57
LINC01006-202ENST00000418309 PRPF40BQ6NWY9 871 aaKnown RBP18.62■□□□□ 0.57
LINC01006-202ENST00000418309 CACNA1SQ13698 1873 aa18.62■□□□□ 0.57
LINC01006-202ENST00000418309 KDM3BQ7LBC6 1761 aa18.61■□□□□ 0.57
LINC01006-202ENST00000418309 TNRC6CQ9HCJ0 1690 aaKnown RBP18.61■□□□□ 0.57
LINC01006-202ENST00000418309 RGL2O15211 777 aa18.61■□□□□ 0.57
LINC01006-202ENST00000418309 MYL6BP14649 208 aa18.61■□□□□ 0.57
LINC01006-202ENST00000418309 CACNB1Q02641 598 aaPredicted RBP18.61■□□□□ 0.57
LINC01006-202ENST00000418309 FSTL1Q12841 308 aa18.61■□□□□ 0.57
LINC01006-202ENST00000418309 ERFEQ4G0M1 354 aa18.61■□□□□ 0.57
LINC01006-202ENST00000418309 DPY19L2Q6NUT2 758 aa18.61■□□□□ 0.57
LINC01006-202ENST00000418309 SLX4Q8IY92 1834 aa18.6■□□□□ 0.57
LINC01006-202ENST00000418309 LAMB4A4D0S4 1761 aa18.6■□□□□ 0.57
LINC01006-202ENST00000418309 VEGFAP15692 232 aaPredicted RBP18.6■□□□□ 0.57
LINC01006-202ENST00000418309 NPR1P16066 1061 aa18.6■□□□□ 0.57
LINC01006-202ENST00000418309 SOGA3Q5TF21 947 aa18.6■□□□□ 0.57
LINC01006-202ENST00000418309 KIF6Q6ZMV9 814 aa18.6■□□□□ 0.57
LINC01006-202ENST00000418309 TAOK3Q9H2K8 898 aa18.6■□□□□ 0.57
LINC01006-202ENST00000418309 TSPYL4Q9UJ04 414 aa18.6■□□□□ 0.57
LINC01006-202ENST00000418309 FER1L6Q2WGJ9 1857 aa18.58■□□□□ 0.57
LINC01006-202ENST00000418309 TIAM2Q8IVF5 1701 aa18.58■□□□□ 0.57
LINC01006-202ENST00000418309 ERVV-1B6SEH8 477 aa18.58■□□□□ 0.56
LINC01006-202ENST00000418309 SMC1BQ8NDV3 1235 aa18.58■□□□□ 0.56
LINC01006-202ENST00000418309 MAP3K15Q6ZN16 1313 aa18.57■□□□□ 0.56
LINC01006-202ENST00000418309 MYBBP1AQ9BQG0 1328 aaKnown RBP18.57■□□□□ 0.56
LINC01006-202ENST00000418309 TMPOP42166 694 aaKnown RBP18.57■□□□□ 0.56
LINC01006-202ENST00000418309 NEUROD2Q15784 382 aa18.57■□□□□ 0.56
LINC01006-202ENST00000418309 TTLL7Q6ZT98 887 aa18.57■□□□□ 0.56
LINC01006-202ENST00000418309 NYXQ9GZU5 481 aa18.57■□□□□ 0.56
LINC01006-202ENST00000418309 ZBTB3Q9H5J0 574 aa18.57■□□□□ 0.56
LINC01006-202ENST00000418309 LTBP3Q9NS15 1303 aa18.56■□□□□ 0.56
LINC01006-202ENST00000418309 EIF2S2P20042 333 aaKnown RBP18.56■□□□□ 0.56
LINC01006-202ENST00000418309 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
LINC01006-202ENST00000418309 CCDC146Q8IYE0 955 aa18.56■□□□□ 0.56
LINC01006-202ENST00000418309 DICER1Q9UPY3 1922 aaKnown RBP18.55■□□□□ 0.56
LINC01006-202ENST00000418309 KLRG2A4D1S0 409 aaPredicted RBP18.55■□□□□ 0.56
LINC01006-202ENST00000418309 GPTP24298 496 aa18.55■□□□□ 0.56
LINC01006-202ENST00000418309 CCDC93Q567U6 631 aa18.55■□□□□ 0.56
LINC01006-202ENST00000418309 NUTM1Q86Y26 1132 aa18.55■□□□□ 0.56
LINC01006-202ENST00000418309 NUP98P52948 1817 aa18.55■□□□□ 0.56
LINC01006-202ENST00000418309 ALDH1B1P30837 517 aa18.54■□□□□ 0.56
LINC01006-202ENST00000418309 HTRA3P83110 453 aa18.54■□□□□ 0.56
LINC01006-202ENST00000418309 WDR43Q15061 677 aaKnown RBP eCLIP18.54■□□□□ 0.56
LINC01006-202ENST00000418309 DNAJC5GQ8N7S2 189 aa18.54■□□□□ 0.56
LINC01006-202ENST00000418309 C7orf43Q8WVR3 580 aa18.54■□□□□ 0.56
LINC01006-202ENST00000418309 ARFGEF2Q9Y6D5 1785 aa18.54■□□□□ 0.56
LINC01006-202ENST00000418309 BABAM1Q9NWV8 329 aa18.53■□□□□ 0.56
LINC01006-202ENST00000418309 ERBB4Q15303 1308 aa18.52■□□□□ 0.56
LINC01006-202ENST00000418309 WDR90Q96KV7 1748 aa18.52■□□□□ 0.56
LINC01006-202ENST00000418309 RNF39Q9H2S5 420 aa18.52■□□□□ 0.56
LINC01006-202ENST00000418309 LAS1LQ9Y4W2 734 aaKnown RBP18.52■□□□□ 0.56
LINC01006-202ENST00000418309 POTECB2RU33 542 aa18.51■□□□□ 0.55
LINC01006-202ENST00000418309 DDNO94850 711 aaPredicted RBP18.51■□□□□ 0.55
LINC01006-202ENST00000418309 FKBP4Q02790 459 aaKnown RBP eCLIP18.51■□□□□ 0.55
LINC01006-202ENST00000418309 SUSD4Q5VX71 490 aa18.51■□□□□ 0.55
LINC01006-202ENST00000418309 OLFM4Q6UX06 510 aa18.51■□□□□ 0.55
LINC01006-202ENST00000418309 GIGYF2Q6Y7W6 1299 aaKnown RBP18.51■□□□□ 0.55
LINC01006-202ENST00000418309 RTKN2Q8IZC4 609 aa18.51■□□□□ 0.55
LINC01006-202ENST00000418309 NECTIN2Q92692 538 aa18.51■□□□□ 0.55
LINC01006-202ENST00000418309 RPGRQ92834 1020 aaKnown RBP18.51■□□□□ 0.55
LINC01006-202ENST00000418309 RUNDC1Q96C34 613 aa18.51■□□□□ 0.55
LINC01006-202ENST00000418309 ANXA1P04083 346 aa18.5■□□□□ 0.55
LINC01006-202ENST00000418309 PPP1R42Q7Z4L9 355 aa18.5■□□□□ 0.55
LINC01006-202ENST00000418309 ZNF34Q8IZ26 560 aa18.5■□□□□ 0.55
LINC01006-202ENST00000418309 ZNF277Q9NRM2 450 aaPredicted RBP18.5■□□□□ 0.55
LINC01006-202ENST00000418309 UBN2Q6ZU65 1347 aa18.49■□□□□ 0.55
LINC01006-202ENST00000418309 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
LINC01006-202ENST00000418309 PDIA6Q15084 440 aa18.49■□□□□ 0.55
LINC01006-202ENST00000418309 ABCC12Q96J65 1359 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms