RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 FLIIQ13045 1269 aa10.77□□□□□ -0.68
TRIM48-201ENST00000417545 ZNF827Q17R98 1081 aa10.77□□□□□ -0.68
TRIM48-201ENST00000417545 PROSER3Q2NL68 480 aa10.77□□□□□ -0.68
TRIM48-201ENST00000417545 NBPF10Q6P3W6 841 aaKnown RBP10.77□□□□□ -0.68
TRIM48-201ENST00000417545 SAMD1Q6SPF0 538 aaPredicted RBP10.77□□□□□ -0.68
TRIM48-201ENST00000417545 COPS6Q7L5N1 327 aa10.77□□□□□ -0.68
TRIM48-201ENST00000417545 MRPL50Q8N5N7 158 aaKnown RBP10.77□□□□□ -0.68
TRIM48-201ENST00000417545 NBPF15Q8N660 670 aa10.77□□□□□ -0.68
TRIM48-201ENST00000417545 PHAXQ9H814 394 aaKnown RBP10.77□□□□□ -0.68
TRIM48-201ENST00000417545 BCORQ6W2J9 1755 aa10.77□□□□□ -0.69
TRIM48-201ENST00000417545 ARFGEF2Q9Y6D5 1785 aa10.77□□□□□ -0.69
TRIM48-201ENST00000417545 SOCS7O14512 581 aa10.76□□□□□ -0.69
TRIM48-201ENST00000417545 BCAR3O75815 825 aa10.76□□□□□ -0.69
TRIM48-201ENST00000417545 NEXNQ0ZGT2 675 aa10.76□□□□□ -0.69
TRIM48-201ENST00000417545 FTSJ3Q8IY81 847 aaKnown RBP10.76□□□□□ -0.69
TRIM48-201ENST00000417545 AKT1S1Q96B36 256 aa10.76□□□□□ -0.69
TRIM48-201ENST00000417545 API5Q9BZZ5 524 aaKnown RBP10.76□□□□□ -0.69
TRIM48-201ENST00000417545 ZBTB3Q9H5J0 574 aa10.76□□□□□ -0.69
TRIM48-201ENST00000417545 ANO8Q9HCE9 1232 aaPredicted RBP10.76□□□□□ -0.69
TRIM48-201ENST00000417545 TBC1D2BQ9UPU7 963 aa10.76□□□□□ -0.69
TRIM48-201ENST00000417545 PTPRCP08575 1304 aa10.76□□□□□ -0.69
TRIM48-201ENST00000417545 SCN7AQ01118 1682 aa10.76□□□□□ -0.69
TRIM48-201ENST00000417545 NPHP1O15259 732 aa10.75□□□□□ -0.69
TRIM48-201ENST00000417545 MS4A1P11836 297 aa10.75□□□□□ -0.69
TRIM48-201ENST00000417545 EIF5P55010 431 aaKnown RBP10.75□□□□□ -0.69
TRIM48-201ENST00000417545 PDIA6Q15084 440 aa10.75□□□□□ -0.69
TRIM48-201ENST00000417545 ZKSCAN2Q63HK3 967 aa10.75□□□□□ -0.69
TRIM48-201ENST00000417545 SLC4A10Q6U841 1118 aa10.75□□□□□ -0.69
TRIM48-201ENST00000417545 SP7Q8TDD2 431 aaPredicted RBP10.75□□□□□ -0.69
TRIM48-201ENST00000417545 NOB1Q9ULX3 412 aaKnown RBP10.75□□□□□ -0.69
TRIM48-201ENST00000417545 ANKRD36CQ5JPF3 1778 aa10.75□□□□□ -0.69
TRIM48-201ENST00000417545 AFDNP55196 1824 aaKnown RBP10.75□□□□□ -0.69
TRIM48-201ENST00000417545 R3HDM1Q15032 1099 aaKnown RBP10.75□□□□□ -0.69
TRIM48-201ENST00000417545 HSP90AB3PQ58FF7 597 aa10.75□□□□□ -0.69
TRIM48-201ENST00000417545 TTLL7Q6ZT98 887 aa10.75□□□□□ -0.69
TRIM48-201ENST00000417545 ANKRD13DQ6ZTN6 518 aa10.75□□□□□ -0.69
TRIM48-201ENST00000417545 G2E3Q7L622 706 aa10.75□□□□□ -0.69
TRIM48-201ENST00000417545 ARHGEF1Q92888 912 aaKnown RBP10.75□□□□□ -0.69
TRIM48-201ENST00000417545 MAP3K15Q6ZN16 1313 aa10.74□□□□□ -0.69
TRIM48-201ENST00000417545 NUP98P52948 1817 aa10.74□□□□□ -0.69
TRIM48-201ENST00000417545 USPL1Q5W0Q7 1092 aa10.74□□□□□ -0.69
TRIM48-201ENST00000417545 SMIM5Q71RC9 77 aa10.74□□□□□ -0.69
TRIM48-201ENST00000417545 PLBD2Q8NHP8 589 aa10.74□□□□□ -0.69
TRIM48-201ENST00000417545 NARFQ9UHQ1 456 aa10.74□□□□□ -0.69
TRIM48-201ENST00000417545 MAP3K2Q9Y2U5 619 aa10.74□□□□□ -0.69
TRIM48-201ENST00000417545 PNPLA7Q6ZV29 1317 aa10.74□□□□□ -0.69
TRIM48-201ENST00000417545 PI4KAP2A4QPH2 592 aa10.73□□□□□ -0.69
TRIM48-201ENST00000417545 PSDA5PKW4 1024 aaPredicted RBP10.73□□□□□ -0.69
TRIM48-201ENST00000417545 KSR2Q6VAB6 950 aa10.73□□□□□ -0.69
TRIM48-201ENST00000417545 PI4KAP1Q8N8J0 262 aa10.73□□□□□ -0.69
TRIM48-201ENST00000417545 MYD88Q99836 296 aa10.73□□□□□ -0.69
TRIM48-201ENST00000417545 SRP68Q9UHB9 627 aaKnown RBP10.73□□□□□ -0.69
TRIM48-201ENST00000417545 USP42Q9H9J4 1324 aaKnown RBP10.73□□□□□ -0.69
TRIM48-201ENST00000417545 ERVV-1B6SEH8 477 aa10.72□□□□□ -0.69
TRIM48-201ENST00000417545 RRP1P56182 461 aaKnown RBP10.72□□□□□ -0.69
TRIM48-201ENST00000417545 ATF7IPQ6VMQ6 1270 aa10.72□□□□□ -0.69
TRIM48-201ENST00000417545 BICDL1Q6ZP65 573 aa10.72□□□□□ -0.69
TRIM48-201ENST00000417545 COL23A1Q86Y22 540 aaPredicted RBP10.72□□□□□ -0.69
TRIM48-201ENST00000417545 DNAAF4Q8WXU2 420 aa10.72□□□□□ -0.69
TRIM48-201ENST00000417545 CLUAP1Q96AJ1 413 aa10.72□□□□□ -0.69
TRIM48-201ENST00000417545 PXDNLA1KZ92 1463 aa10.71□□□□□ -0.69
TRIM48-201ENST00000417545 F6X3S4 739 aa10.71□□□□□ -0.69
TRIM48-201ENST00000417545 CAMTA2O94983 1202 aa10.71□□□□□ -0.69
TRIM48-201ENST00000417545 NEFLP07196 543 aa10.71□□□□□ -0.69
TRIM48-201ENST00000417545 GTF2E1P29083 439 aaPredicted RBP10.71□□□□□ -0.69
TRIM48-201ENST00000417545 BRPF1P55201 1214 aaPredicted RBP10.71□□□□□ -0.69
TRIM48-201ENST00000417545 MSL1Q68DK7 614 aa10.71□□□□□ -0.69
TRIM48-201ENST00000417545 GIGYF2Q6Y7W6 1299 aaKnown RBP10.71□□□□□ -0.69
TRIM48-201ENST00000417545 DZIP1LQ8IYY4 767 aaKnown RBP10.71□□□□□ -0.69
TRIM48-201ENST00000417545 ARHGAP45Q92619 1136 aa10.71□□□□□ -0.69
TRIM48-201ENST00000417545 NIP7Q9Y221 180 aaKnown RBP eCLIP10.71□□□□□ -0.69
TRIM48-201ENST00000417545 SUPT16HQ9Y5B9 1047 aaKnown RBP10.71□□□□□ -0.69
TRIM48-201ENST00000417545 ADCY9O60503 1353 aa10.7□□□□□ -0.7
TRIM48-201ENST00000417545 FAM177BA6PVY3 158 aa10.7□□□□□ -0.7
TRIM48-201ENST00000417545 PLIN1O60240 522 aa10.7□□□□□ -0.7
TRIM48-201ENST00000417545 GPTP24298 496 aa10.7□□□□□ -0.7
TRIM48-201ENST00000417545 CCT4P50991 539 aaKnown RBP10.7□□□□□ -0.7
TRIM48-201ENST00000417545 CLEC4GQ6UXB4 293 aa10.7□□□□□ -0.7
TRIM48-201ENST00000417545 LRP10Q7Z4F1 713 aa10.7□□□□□ -0.7
TRIM48-201ENST00000417545 AMIGO3Q86WK7 504 aa10.7□□□□□ -0.7
TRIM48-201ENST00000417545 ITPRIPQ8IWB1 547 aa10.7□□□□□ -0.7
TRIM48-201ENST00000417545 NLGN1Q8N2Q7 840 aa10.7□□□□□ -0.7
TRIM48-201ENST00000417545 SLC16A10Q8TF71 515 aa10.7□□□□□ -0.7
TRIM48-201ENST00000417545 SETDB2Q96T68 719 aa10.7□□□□□ -0.7
TRIM48-201ENST00000417545 METTL22Q9BUU2 404 aaPredicted RBP10.7□□□□□ -0.7
TRIM48-201ENST00000417545 SRCIN1Q9C0H9 1055 aa10.7□□□□□ -0.7
TRIM48-201ENST00000417545 N4BP2Q86UW6 1770 aaPredicted RBP10.69□□□□□ -0.7
TRIM48-201ENST00000417545 ATP5J2-PTCD1G3V325 749 aa10.69□□□□□ -0.7
TRIM48-201ENST00000417545 TRIM27P14373 513 aa10.69□□□□□ -0.7
TRIM48-201ENST00000417545 POLD1P28340 1107 aa10.69□□□□□ -0.7
TRIM48-201ENST00000417545 TCIRG1Q13488 830 aa10.69□□□□□ -0.7
TRIM48-201ENST00000417545 POLA2Q14181 598 aa10.69□□□□□ -0.7
TRIM48-201ENST00000417545 HLFQ16534 295 aa10.69□□□□□ -0.7
TRIM48-201ENST00000417545 PARP10Q53GL7 1025 aa10.69□□□□□ -0.7
TRIM48-201ENST00000417545 PPP1R42Q7Z4L9 355 aa10.69□□□□□ -0.7
TRIM48-201ENST00000417545 CASZ1Q86V15 1759 aa10.69□□□□□ -0.7
TRIM48-201ENST00000417545 RGL2O15211 777 aa10.68□□□□□ -0.7
TRIM48-201ENST00000417545 ZBTB7AO95365 584 aa10.68□□□□□ -0.7
TRIM48-201ENST00000417545 GYS1P13807 737 aa10.68□□□□□ -0.7
TRIM48-201ENST00000417545 FKBP8Q14318 412 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms