RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 SMC4Q9NTJ3 1288 aa10.34□□□□□ -0.75
AP001042.1-201ENST00000416842 NOB1Q9ULX3 412 aaKnown RBP10.34□□□□□ -0.75
AP001042.1-201ENST00000416842 MRC1P22897 1456 aa10.34□□□□□ -0.75
AP001042.1-201ENST00000416842 PCDH11XQ9BZA7 1347 aa10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 PCDH11YQ9BZA8 1340 aa10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 C10orf71Q711Q0 1435 aa10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 A0A0G2JLW4 131 aa10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 BTBD11A6QL63 1104 aa10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 ELL2O00472 640 aaPredicted RBP10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 IPO8O15397 1037 aaKnown RBP10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 MMP10P09238 476 aa10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 MS4A1P11836 297 aa10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 TRIM27P14373 513 aa10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 TEFQ10587 303 aa10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 ZKSCAN2Q63HK3 967 aa10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 SAMD1Q6SPF0 538 aaPredicted RBP10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 LINC00116Q8NCU8 138 aa10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 SMARCC1Q92922 1105 aaPredicted RBP10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 KIF16BQ96L93 1317 aa10.33□□□□□ -0.76
AP001042.1-201ENST00000416842 TGFB2P61812 414 aa10.32□□□□□ -0.76
AP001042.1-201ENST00000416842 C9orf131Q5VYM1 1079 aa10.32□□□□□ -0.76
AP001042.1-201ENST00000416842 NFATC2IPQ8NCF5 419 aa10.32□□□□□ -0.76
AP001042.1-201ENST00000416842 BCL2L13Q9BXK5 485 aa10.32□□□□□ -0.76
AP001042.1-201ENST00000416842 CHMP4AQ9BY43 222 aa10.32□□□□□ -0.76
AP001042.1-201ENST00000416842 TNNQ9UQP3 1299 aa10.32□□□□□ -0.76
AP001042.1-201ENST00000416842 CCDC88AQ3V6T2 1871 aa10.32□□□□□ -0.76
AP001042.1-201ENST00000416842 HSPA1AP0DMV8 641 aaKnown RBP10.31□□□□□ -0.76
AP001042.1-201ENST00000416842 HSPA1BP0DMV9 641 aaKnown RBP10.31□□□□□ -0.76
AP001042.1-201ENST00000416842 DPEP1P16444 411 aa10.31□□□□□ -0.76
AP001042.1-201ENST00000416842 ZNF790Q6PG37 636 aa10.31□□□□□ -0.76
AP001042.1-201ENST00000416842 DZIP1LQ8IYY4 767 aaKnown RBP10.31□□□□□ -0.76
AP001042.1-201ENST00000416842 PANK1Q8TE04 598 aa10.31□□□□□ -0.76
AP001042.1-201ENST00000416842 PIGBQ92521 554 aa10.31□□□□□ -0.76
AP001042.1-201ENST00000416842 SIPA1L3O60292 1781 aaPredicted RBP10.31□□□□□ -0.76
AP001042.1-201ENST00000416842 COL5A3P25940 1745 aaPredicted RBP10.3□□□□□ -0.76
AP001042.1-201ENST00000416842 LOC102724428A0A0B4J2F2 783 aa10.3□□□□□ -0.76
AP001042.1-201ENST00000416842 GNPATO15228 680 aa10.3□□□□□ -0.76
AP001042.1-201ENST00000416842 SLC34A2O95436 690 aa10.3□□□□□ -0.76
AP001042.1-201ENST00000416842 SIK1P57059 783 aa10.3□□□□□ -0.76
AP001042.1-201ENST00000416842 ITPK1Q13572 414 aa10.3□□□□□ -0.76
AP001042.1-201ENST00000416842 CCDC30Q5VVM6 783 aa10.3□□□□□ -0.76
AP001042.1-201ENST00000416842 CHRDL2Q6WN34 429 aa10.3□□□□□ -0.76
AP001042.1-201ENST00000416842 MYH14Q7Z406 1995 aaKnown RBP10.3□□□□□ -0.76
AP001042.1-201ENST00000416842 ABCC4O15439 1325 aa10.3□□□□□ -0.76
AP001042.1-201ENST00000416842 PTPRCP08575 1304 aa10.3□□□□□ -0.76
AP001042.1-201ENST00000416842 PCNTO95613 3336 aa10.3□□□□□ -0.76
AP001042.1-201ENST00000416842 KDM3BQ7LBC6 1761 aa10.29□□□□□ -0.76
AP001042.1-201ENST00000416842 SCN11AQ9UI33 1791 aa10.29□□□□□ -0.76
AP001042.1-201ENST00000416842 ZNF831Q5JPB2 1677 aa10.29□□□□□ -0.76
AP001042.1-201ENST00000416842 CABP4P57796 275 aa10.29□□□□□ -0.76
AP001042.1-201ENST00000416842 MVPQ14764 893 aaKnown RBP10.29□□□□□ -0.76
AP001042.1-201ENST00000416842 INTS3Q68E01 1043 aaKnown RBP10.29□□□□□ -0.76
AP001042.1-201ENST00000416842 FRAT1Q92837 279 aaPredicted RBP10.29□□□□□ -0.76
AP001042.1-201ENST00000416842 RRAGCQ9HB90 399 aa10.29□□□□□ -0.76
AP001042.1-201ENST00000416842 KDM2BQ8NHM5 1336 aa10.29□□□□□ -0.76
AP001042.1-201ENST00000416842 ZBTB7BO15156 539 aaPredicted RBP10.28□□□□□ -0.76
AP001042.1-201ENST00000416842 KCNA3P22001 575 aa10.28□□□□□ -0.76
AP001042.1-201ENST00000416842 PDIA6Q15084 440 aa10.28□□□□□ -0.76
AP001042.1-201ENST00000416842 SMC1BQ8NDV3 1235 aa10.28□□□□□ -0.76
AP001042.1-201ENST00000416842 API5Q9BZZ5 524 aaKnown RBP10.28□□□□□ -0.76
AP001042.1-201ENST00000416842 ZBTB40Q9NUA8 1239 aa10.28□□□□□ -0.76
AP001042.1-201ENST00000416842 COG6Q9Y2V7 657 aa10.28□□□□□ -0.76
AP001042.1-201ENST00000416842 TIAM2Q8IVF5 1701 aa10.27□□□□□ -0.76
AP001042.1-201ENST00000416842 SLC39A6Q13433 755 aa10.27□□□□□ -0.77
AP001042.1-201ENST00000416842 B4GALNT3Q6L9W6 998 aa10.27□□□□□ -0.77
AP001042.1-201ENST00000416842 G2E3Q7L622 706 aa10.27□□□□□ -0.77
AP001042.1-201ENST00000416842 LRP10Q7Z4F1 713 aa10.27□□□□□ -0.77
AP001042.1-201ENST00000416842 TMEM57Q8N5G2 664 aa10.27□□□□□ -0.77
AP001042.1-201ENST00000416842 ZNF496Q96IT1 587 aaPredicted RBP10.27□□□□□ -0.77
AP001042.1-201ENST00000416842 CCDC87Q9NVE4 849 aa10.27□□□□□ -0.77
AP001042.1-201ENST00000416842 RNF181Q9P0P0 153 aa10.27□□□□□ -0.77
AP001042.1-201ENST00000416842 ASAP1Q9ULH1 1129 aa10.27□□□□□ -0.77
AP001042.1-201ENST00000416842 TCERG1O14776 1098 aaKnown RBP10.26□□□□□ -0.77
AP001042.1-201ENST00000416842 SNRPA1P09661 255 aaKnown RBP10.26□□□□□ -0.77
AP001042.1-201ENST00000416842 ATP6V1AP38606 617 aa10.26□□□□□ -0.77
AP001042.1-201ENST00000416842 NLGN1Q8N2Q7 840 aa10.26□□□□□ -0.77
AP001042.1-201ENST00000416842 CLUAP1Q96AJ1 413 aa10.26□□□□□ -0.77
AP001042.1-201ENST00000416842 PRAMEF22A3QJZ6 481 aa10.25□□□□□ -0.77
AP001042.1-201ENST00000416842 HDGFL1Q5TGJ6 251 aa10.25□□□□□ -0.77
AP001042.1-201ENST00000416842 VSIG10Q8N0Z9 540 aa10.25□□□□□ -0.77
AP001042.1-201ENST00000416842 FMNL2Q96PY5 1086 aa10.25□□□□□ -0.77
AP001042.1-201ENST00000416842 PIM2Q9P1W9 311 aa10.25□□□□□ -0.77
AP001042.1-201ENST00000416842 DDX19BQ9UMR2 479 aa10.25□□□□□ -0.77
AP001042.1-201ENST00000416842 PCDHB15Q9Y5E8 787 aa10.25□□□□□ -0.77
AP001042.1-201ENST00000416842 IBTKQ9P2D0 1353 aaPredicted RBP10.25□□□□□ -0.77
AP001042.1-201ENST00000416842 DLEC1Q9Y238 1755 aa10.24□□□□□ -0.77
AP001042.1-201ENST00000416842 GYS1P13807 737 aa10.24□□□□□ -0.77
AP001042.1-201ENST00000416842 CANXP27824 592 aaKnown RBP10.24□□□□□ -0.77
AP001042.1-201ENST00000416842 FLIIQ13045 1269 aa10.24□□□□□ -0.77
AP001042.1-201ENST00000416842 TRAPPC3LQ5T215 181 aa10.24□□□□□ -0.77
AP001042.1-201ENST00000416842 CCDC136Q96JN2 1154 aa10.24□□□□□ -0.77
AP001042.1-201ENST00000416842 STK31Q9BXU1 1019 aa10.24□□□□□ -0.77
AP001042.1-201ENST00000416842 DDX21Q9NR30 783 aaKnown RBP eCLIP10.24□□□□□ -0.77
AP001042.1-201ENST00000416842 ATG3Q9NT62 314 aa10.24□□□□□ -0.77
AP001042.1-201ENST00000416842 TMOD3Q9NYL9 352 aa10.24□□□□□ -0.77
AP001042.1-201ENST00000416842 DBF4Q9UBU7 674 aaPredicted RBP10.24□□□□□ -0.77
AP001042.1-201ENST00000416842 USP16Q9Y5T5 823 aa10.24□□□□□ -0.77
AP001042.1-201ENST00000416842 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
AP001042.1-201ENST00000416842 AFDNP55196 1824 aaKnown RBP10.23□□□□□ -0.77
AP001042.1-201ENST00000416842 DALRD3Q5D0E6 543 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms