RNA–Protein interactions for RNA: ENST00000416650.5

APTR-202, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 3

Gene APTR, Length 609 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-202ENST00000416650 ST5P78524 1137 aa28.71■■■□□ 2.19
APTR-202ENST00000416650 NBPF10Q6P3W6 841 aaKnown RBP28.71■■■□□ 2.19
APTR-202ENST00000416650 CLEC4GQ6UXB4 293 aa28.71■■■□□ 2.19
APTR-202ENST00000416650 NBPF15Q8N660 670 aa28.71■■■□□ 2.19
APTR-202ENST00000416650 ZNF652Q9Y2D9 606 aa28.71■■■□□ 2.19
APTR-202ENST00000416650 NFKBIEO00221 500 aa28.7■■■□□ 2.18
APTR-202ENST00000416650 NFE2L2Q16236 605 aa28.7■■■□□ 2.18
APTR-202ENST00000416650 MIS18AQ9NYP9 233 aa28.7■■■□□ 2.18
APTR-202ENST00000416650 C16orf71Q8IYS4 520 aaPredicted RBP28.69■■■□□ 2.18
APTR-202ENST00000416650 RBM46Q8TBY0 533 aaKnown RBP28.69■■■□□ 2.18
APTR-202ENST00000416650 PNISRQ8TF01 805 aaKnown RBP28.69■■■□□ 2.18
APTR-202ENST00000416650 MAPK8IP3Q9UPT6 1336 aa28.69■■■□□ 2.18
APTR-202ENST00000416650 RGL2O15211 777 aa28.68■■■□□ 2.18
APTR-202ENST00000416650 APLP1P51693 650 aa28.66■■■□□ 2.18
APTR-202ENST00000416650 NBPF5PQ86XG9 351 aaPredicted RBP28.66■■■□□ 2.18
APTR-202ENST00000416650 PNNQ9H307 717 aaKnown RBP28.66■■■□□ 2.18
APTR-202ENST00000416650 C21orf2O43822 256 aa28.65■■■□□ 2.18
APTR-202ENST00000416650 STYK1Q6J9G0 422 aa28.65■■■□□ 2.18
APTR-202ENST00000416650 THUMPD2Q9BTF0 503 aaKnown RBP28.65■■■□□ 2.18
APTR-202ENST00000416650 SRGNP10124 158 aa28.64■■■□□ 2.18
APTR-202ENST00000416650 RRAGCQ9HB90 399 aa28.64■■■□□ 2.18
APTR-202ENST00000416650 ZNF219Q9P2Y4 722 aaPredicted RBP28.64■■■□□ 2.18
APTR-202ENST00000416650 RALBP1Q15311 655 aa28.63■■■□□ 2.17
APTR-202ENST00000416650 CNKSR1Q969H4 720 aa28.63■■■□□ 2.17
APTR-202ENST00000416650 NIP7Q9Y221 180 aaKnown RBP eCLIP28.63■■■□□ 2.17
APTR-202ENST00000416650 PRPF40BQ6NWY9 871 aaKnown RBP28.62■■■□□ 2.17
APTR-202ENST00000416650 MASTLQ96GX5 879 aa28.62■■■□□ 2.17
APTR-202ENST00000416650 GLTPD2A6NH11 291 aa28.61■■■□□ 2.17
APTR-202ENST00000416650 EIF4A1P60842 406 aaKnown RBP28.61■■■□□ 2.17
APTR-202ENST00000416650 LTBP3Q9NS15 1303 aa28.61■■■□□ 2.17
APTR-202ENST00000416650 FSTL1Q12841 308 aa28.6■■■□□ 2.17
APTR-202ENST00000416650 ANKRD36CQ5JPF3 1778 aa28.6■■■□□ 2.17
APTR-202ENST00000416650 HLFQ16534 295 aa28.59■■■□□ 2.17
APTR-202ENST00000416650 TPTE2Q6XPS3 522 aa28.58■■■□□ 2.17
APTR-202ENST00000416650 TAOK3Q9H2K8 898 aa28.58■■■□□ 2.17
APTR-202ENST00000416650 SOGA3Q5TF21 947 aa28.57■■■□□ 2.16
APTR-202ENST00000416650 MAP3K15Q6ZN16 1313 aa28.55■■■□□ 2.16
APTR-202ENST00000416650 KLRG2A4D1S0 409 aaPredicted RBP28.55■■■□□ 2.16
APTR-202ENST00000416650 FAM177BA6PVY3 158 aa28.55■■■□□ 2.16
APTR-202ENST00000416650 NPR1P16066 1061 aa28.55■■■□□ 2.16
APTR-202ENST00000416650 NGEFQ8N5V2 710 aa28.55■■■□□ 2.16
APTR-202ENST00000416650 MYBBP1AQ9BQG0 1328 aaKnown RBP28.54■■■□□ 2.16
APTR-202ENST00000416650 VEGFAP15692 232 aaPredicted RBP28.54■■■□□ 2.16
APTR-202ENST00000416650 ERFEQ4G0M1 354 aa28.54■■■□□ 2.16
APTR-202ENST00000416650 RRP7AQ9Y3A4 280 aaKnown RBP28.54■■■□□ 2.16
APTR-202ENST00000416650 ERBB4Q15303 1308 aa28.53■■■□□ 2.16
APTR-202ENST00000416650 ERVV-1B6SEH8 477 aa28.53■■■□□ 2.16
APTR-202ENST00000416650 DDX10Q13206 875 aaKnown RBP28.53■■■□□ 2.16
APTR-202ENST00000416650 KIF6Q6ZMV9 814 aa28.53■■■□□ 2.16
APTR-202ENST00000416650 SMC1BQ8NDV3 1235 aa28.53■■■□□ 2.16
APTR-202ENST00000416650 TSPYL4Q9UJ04 414 aa28.53■■■□□ 2.16
APTR-202ENST00000416650 ABCC12Q96J65 1359 aa28.52■■■□□ 2.16
APTR-202ENST00000416650 MYL6BP14649 208 aa28.52■■■□□ 2.16
APTR-202ENST00000416650 RIPK4P57078 832 aa28.52■■■□□ 2.16
APTR-202ENST00000416650 TTLL7Q6ZT98 887 aa28.52■■■□□ 2.16
APTR-202ENST00000416650 IBTKQ9P2D0 1353 aaPredicted RBP28.51■■■□□ 2.16
APTR-202ENST00000416650 SCN4AP35499 1836 aa28.51■■■□□ 2.15
APTR-202ENST00000416650 C7orf43Q8WVR3 580 aa28.51■■■□□ 2.15
APTR-202ENST00000416650 RIC1Q4ADV7 1423 aa28.51■■■□□ 2.15
APTR-202ENST00000416650 LMOD3Q0VAK6 560 aa28.5■■■□□ 2.15
APTR-202ENST00000416650 CCDC93Q567U6 631 aa28.5■■■□□ 2.15
APTR-202ENST00000416650 DPY19L2Q6NUT2 758 aa28.5■■■□□ 2.15
APTR-202ENST00000416650 DNAJC5GQ8N7S2 189 aa28.5■■■□□ 2.15
APTR-202ENST00000416650 NYXQ9GZU5 481 aa28.5■■■□□ 2.15
APTR-202ENST00000416650 GTF2E1P29083 439 aaPredicted RBP28.49■■■□□ 2.15
APTR-202ENST00000416650 TMPOP42166 694 aaKnown RBP28.49■■■□□ 2.15
APTR-202ENST00000416650 LAMB2P55268 1798 aa28.49■■■□□ 2.15
APTR-202ENST00000416650 ZBTB3Q9H5J0 574 aa28.48■■■□□ 2.15
APTR-202ENST00000416650 UBN2Q6ZU65 1347 aa28.47■■■□□ 2.15
APTR-202ENST00000416650 POTECB2RU33 542 aa28.47■■■□□ 2.15
APTR-202ENST00000416650 BABAM1Q9NWV8 329 aa28.47■■■□□ 2.15
APTR-202ENST00000416650 HTRA3P83110 453 aa28.46■■■□□ 2.15
APTR-202ENST00000416650 NUTM1Q86Y26 1132 aa28.46■■■□□ 2.15
APTR-202ENST00000416650 CRY2Q49AN0 593 aa28.45■■■□□ 2.14
APTR-202ENST00000416650 GPTP24298 496 aa28.44■■■□□ 2.14
APTR-202ENST00000416650 FKBP4Q02790 459 aaKnown RBP eCLIP28.44■■■□□ 2.14
APTR-202ENST00000416650 SNED1Q8TER0 1413 aa28.43■■■□□ 2.14
APTR-202ENST00000416650 ALDH1B1P30837 517 aa28.43■■■□□ 2.14
APTR-202ENST00000416650 GIGYF2Q6Y7W6 1299 aaKnown RBP28.43■■■□□ 2.14
APTR-202ENST00000416650 LRP10Q7Z4F1 713 aa28.43■■■□□ 2.14
APTR-202ENST00000416650 CCDC146Q8IYE0 955 aa28.43■■■□□ 2.14
APTR-202ENST00000416650 OLFM4Q6UX06 510 aa28.42■■■□□ 2.14
APTR-202ENST00000416650 EIF2S2P20042 333 aaKnown RBP28.41■■■□□ 2.14
APTR-202ENST00000416650 WDR43Q15061 677 aaKnown RBP eCLIP28.41■■■□□ 2.14
APTR-202ENST00000416650 PDIA6Q15084 440 aa28.41■■■□□ 2.14
APTR-202ENST00000416650 ZNF34Q8IZ26 560 aa28.41■■■□□ 2.14
APTR-202ENST00000416650 RTKN2Q8IZC4 609 aa28.41■■■□□ 2.14
APTR-202ENST00000416650 DDNO94850 711 aaPredicted RBP28.4■■■□□ 2.14
APTR-202ENST00000416650 SUSD4Q5VX71 490 aa28.4■■■□□ 2.14
APTR-202ENST00000416650 KLRG1Q96E93 195 aa28.4■■■□□ 2.14
APTR-202ENST00000416650 NTSR2O95665 410 aa28.39■■■□□ 2.14
APTR-202ENST00000416650 NEUROD2Q15784 382 aa28.39■■■□□ 2.14
APTR-202ENST00000416650 PROSER3Q2NL68 480 aa28.39■■■□□ 2.14
APTR-202ENST00000416650 RUNDC1Q96C34 613 aa28.39■■■□□ 2.14
APTR-202ENST00000416650 ZNF277Q9NRM2 450 aaPredicted RBP28.39■■■□□ 2.14
APTR-202ENST00000416650 PCNTO95613 3336 aa28.38■■■□□ 2.13
APTR-202ENST00000416650 ANXA1P04083 346 aa28.37■■■□□ 2.13
APTR-202ENST00000416650 PARP10Q53GL7 1025 aa28.37■■■□□ 2.13
APTR-202ENST00000416650 RPGRQ92834 1020 aaKnown RBP28.37■■■□□ 2.13
APTR-202ENST00000416650 PPP1R42Q7Z4L9 355 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms