RNA–Protein interactions for RNA: ENST00000416516.2

DCLK3-201, Transcript of doublecortin like kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DCLK3, Length 5,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK3-201ENST00000416516 PIBF1Q8WXW3 757 aa12.58□□□□□ -0.4
DCLK3-201ENST00000416516 CCDC102AQ96A19 550 aa12.58□□□□□ -0.4
DCLK3-201ENST00000416516 TSNARE1Q96NA8 513 aa12.58□□□□□ -0.4
DCLK3-201ENST00000416516 PANK2Q9BZ23 570 aa12.58□□□□□ -0.4
DCLK3-201ENST00000416516 SSX2IPQ9Y2D8 614 aa12.58□□□□□ -0.4
DCLK3-201ENST00000416516 GOLIM4O00461 696 aa12.58□□□□□ -0.4
DCLK3-201ENST00000416516 CASTP20810 708 aaKnown RBP12.58□□□□□ -0.4
DCLK3-201ENST00000416516 CCDC141Q6ZP82 1450 aa12.58□□□□□ -0.4
DCLK3-201ENST00000416516 STK11IPQ8N1F8 1099 aa12.58□□□□□ -0.4
DCLK3-201ENST00000416516 SREK1Q8WXA9 508 aaKnown RBP12.58□□□□□ -0.4
DCLK3-201ENST00000416516 PRDM10Q9NQV6 1147 aa12.58□□□□□ -0.4
DCLK3-201ENST00000416516 TRMT112Q9UI30 125 aaKnown RBP12.58□□□□□ -0.4
DCLK3-201ENST00000416516 FILIP1Q7Z7B0 1213 aa12.57□□□□□ -0.4
DCLK3-201ENST00000416516 ZGPATQ8N5A5 531 aaKnown RBP12.57□□□□□ -0.4
DCLK3-201ENST00000416516 ERMNQ8TAM6 284 aa12.57□□□□□ -0.4
DCLK3-201ENST00000416516 PIP4K2BP78356 416 aa12.57□□□□□ -0.4
DCLK3-201ENST00000416516 DHX29Q7Z478 1369 aaKnown RBP12.57□□□□□ -0.4
DCLK3-201ENST00000416516 TTC21BQ7Z4L5 1316 aa12.57□□□□□ -0.4
DCLK3-201ENST00000416516 UQCRFS1P1P0C7P4 283 aa12.57□□□□□ -0.4
DCLK3-201ENST00000416516 FERP16591 822 aa12.57□□□□□ -0.4
DCLK3-201ENST00000416516 GSDMDP57764 484 aa12.57□□□□□ -0.4
DCLK3-201ENST00000416516 NLRP5P59047 1200 aa12.57□□□□□ -0.4
DCLK3-201ENST00000416516 TAF3Q5VWG9 929 aa12.57□□□□□ -0.4
DCLK3-201ENST00000416516 DDX19AQ9NUU7 478 aaKnown RBP12.57□□□□□ -0.4
DCLK3-201ENST00000416516 TOP1P11387 765 aaKnown RBP12.57□□□□□ -0.4
DCLK3-201ENST00000416516 BBXQ8WY36 941 aaPredicted RBP12.57□□□□□ -0.4
DCLK3-201ENST00000416516 CDK13Q14004 1512 aaKnown RBP12.57□□□□□ -0.4
DCLK3-201ENST00000416516 ABCC5O15440 1437 aa12.56□□□□□ -0.4
DCLK3-201ENST00000416516 PTPRCP08575 1304 aa12.56□□□□□ -0.4
DCLK3-201ENST00000416516 PPM1FP49593 454 aaPredicted RBP12.56□□□□□ -0.4
DCLK3-201ENST00000416516 IFFO1Q0D2I5 559 aa12.56□□□□□ -0.4
DCLK3-201ENST00000416516 EHBP1Q8NDI1 1231 aa12.56□□□□□ -0.4
DCLK3-201ENST00000416516 HOMER2Q9NSB8 354 aa12.56□□□□□ -0.4
DCLK3-201ENST00000416516 ZC3H6P61129 1189 aaKnown RBP12.56□□□□□ -0.4
DCLK3-201ENST00000416516 KIF18AQ8NI77 898 aa12.56□□□□□ -0.4
DCLK3-201ENST00000416516 NSD3Q9BZ95 1437 aa12.56□□□□□ -0.4
DCLK3-201ENST00000416516 NBPF7P0C2Y1 421 aaPredicted RBP12.56□□□□□ -0.4
DCLK3-201ENST00000416516 CBX1P83916 185 aa12.56□□□□□ -0.4
DCLK3-201ENST00000416516 KLHL40Q2TBA0 621 aa12.56□□□□□ -0.4
DCLK3-201ENST00000416516 DDX46Q7L014 1031 aaKnown RBP12.56□□□□□ -0.4
DCLK3-201ENST00000416516 WDR78Q5VTH9 848 aa12.56□□□□□ -0.4
DCLK3-201ENST00000416516 IL1RAPL2Q9NP60 686 aa12.56□□□□□ -0.4
DCLK3-201ENST00000416516 RANBP6O60518 1105 aaKnown RBP12.55□□□□□ -0.4
DCLK3-201ENST00000416516 CCDC183Q5T5S1 534 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 COMMD10Q9Y6G5 202 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 PTPN14Q15678 1187 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 HMG20BQ9P0W2 317 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 MRC2Q9UBG0 1479 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 FSD2A1L4K1 749 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 GOLGA8AA7E2F4 631 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 GOLGA8BA8MQT2 603 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 TRIM27P14373 513 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 GNAQP50148 359 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 CCDC174Q6PII3 467 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 TMTC2Q8N394 836 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 DNAAF4Q8WXU2 420 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 PHF8Q9UPP1 1060 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 IFIT3O14879 490 aaKnown RBP12.55□□□□□ -0.4
DCLK3-201ENST00000416516 MCM5P33992 734 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 FAM177A1Q8N128 213 aaPredicted RBP12.55□□□□□ -0.4
DCLK3-201ENST00000416516 EVI5LQ96CN4 794 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 RMND1Q9NWS8 449 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 HDAC9Q9UKV0 1011 aa12.55□□□□□ -0.4
DCLK3-201ENST00000416516 KIF4BQ2VIQ3 1234 aa12.54□□□□□ -0.4
DCLK3-201ENST00000416516 UBA5Q9GZZ9 404 aa12.54□□□□□ -0.4
DCLK3-201ENST00000416516 NSD2O96028 1365 aa12.54□□□□□ -0.4
DCLK3-201ENST00000416516 PRPHP41219 470 aa12.54□□□□□ -0.4
DCLK3-201ENST00000416516 BMP2KLQ5H9B9 411 aa12.54□□□□□ -0.4
DCLK3-201ENST00000416516 MYD88Q99836 296 aa12.54□□□□□ -0.4
DCLK3-201ENST00000416516 UTP14AQ9BVJ6 771 aaKnown RBP12.54□□□□□ -0.4
DCLK3-201ENST00000416516 STX6O43752 255 aa12.54□□□□□ -0.4
DCLK3-201ENST00000416516 TTC12Q9H892 705 aaPredicted RBP12.54□□□□□ -0.4
DCLK3-201ENST00000416516 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
DCLK3-201ENST00000416516 MAP4K4O95819 1239 aaPredicted RBP12.53□□□□□ -0.4
DCLK3-201ENST00000416516 CASQ1P31415 396 aa12.53□□□□□ -0.4
DCLK3-201ENST00000416516 ST5P78524 1137 aa12.53□□□□□ -0.4
DCLK3-201ENST00000416516 CNNM3Q8NE01 707 aa12.53□□□□□ -0.4
DCLK3-201ENST00000416516 POLR3GO15318 223 aaPredicted RBP12.53□□□□□ -0.4
DCLK3-201ENST00000416516 ZFYP08048 801 aaPredicted RBP12.53□□□□□ -0.4
DCLK3-201ENST00000416516 FAM193AP78312 1265 aa12.53□□□□□ -0.4
DCLK3-201ENST00000416516 KAT14Q9H8E8 782 aa12.53□□□□□ -0.4
DCLK3-201ENST00000416516 USP25Q9UHP3 1055 aa12.53□□□□□ -0.4
DCLK3-201ENST00000416516 LIMCH1Q9UPQ0 1083 aa12.53□□□□□ -0.4
DCLK3-201ENST00000416516 TDRD12Q587J7 1177 aaKnown RBP12.53□□□□□ -0.4
DCLK3-201ENST00000416516 C6orf163Q5TEZ5 329 aa12.53□□□□□ -0.4
DCLK3-201ENST00000416516 PAXIP1Q6ZW49 1069 aaPredicted RBP12.53□□□□□ -0.4
DCLK3-201ENST00000416516 IFNL2Q8IZJ0 200 aa12.53□□□□□ -0.4
DCLK3-201ENST00000416516 C6orf229H3BNL8 230 aa12.52□□□□□ -0.4
DCLK3-201ENST00000416516 UBA7P41226 1012 aa12.52□□□□□ -0.4
DCLK3-201ENST00000416516 CCDC40Q4G0X9 1142 aa12.52□□□□□ -0.4
DCLK3-201ENST00000416516 PTCD1O75127 700 aaKnown RBP12.52□□□□□ -0.4
DCLK3-201ENST00000416516 MTIF2P46199 727 aaKnown RBP12.52□□□□□ -0.4
DCLK3-201ENST00000416516 RRS1Q15050 365 aaKnown RBP12.52□□□□□ -0.4
DCLK3-201ENST00000416516 SPECC1LQ69YQ0 1117 aa12.52□□□□□ -0.4
DCLK3-201ENST00000416516 TBC1D9Q6ZT07 1266 aa12.52□□□□□ -0.4
DCLK3-201ENST00000416516 NGLY1Q96IV0 654 aa12.52□□□□□ -0.4
DCLK3-201ENST00000416516 CRNKL1Q9BZJ0 848 aaKnown RBP12.52□□□□□ -0.4
DCLK3-201ENST00000416516 CCDC175P0C221 793 aa12.52□□□□□ -0.41
DCLK3-201ENST00000416516 DYNC1I1O14576 645 aa12.52□□□□□ -0.41
DCLK3-201ENST00000416516 IARSP41252 1262 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms