RNA–Protein interactions for RNA: ENST00000415993.5

HDAC10-203, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 2,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-203ENST00000415993 IL1RAPL2Q9NP60 686 aa21.31■■□□□ 1
HDAC10-203ENST00000415993 TSHZ3Q63HK5 1081 aa21.3■■□□□ 1
HDAC10-203ENST00000415993 BICC1Q9H694 974 aaKnown RBP21.3■■□□□ 1
HDAC10-203ENST00000415993 ATG3Q9NT62 314 aa21.3■■□□□ 1
HDAC10-203ENST00000415993 WNK3Q9BYP7 1800 aa21.3■■□□□ 1
HDAC10-203ENST00000415993 ARFGEF2Q9Y6D5 1785 aa21.3■■□□□ 1
HDAC10-203ENST00000415993 LRP6O75581 1613 aa21.3■■□□□ 1
HDAC10-203ENST00000415993 KIF1BPQ96EK5 621 aa21.3■■□□□ 1
HDAC10-203ENST00000415993 BCL9O00512 1426 aa21.29■■□□□ 1
HDAC10-203ENST00000415993 HSP90AB4PQ58FF6 505 aa21.29■■□□□ 1
HDAC10-203ENST00000415993 VSIG10Q8N0Z9 540 aa21.29■■□□□ 1
HDAC10-203ENST00000415993 ITGB4P16144 1822 aa21.28■■□□□ 1
HDAC10-203ENST00000415993 TTLL7Q6ZT98 887 aa21.28■■□□□ 1
HDAC10-203ENST00000415993 THRAP3Q9Y2W1 955 aaKnown RBP21.28■■□□□ 1
HDAC10-203ENST00000415993 CDCA7Q9BWT1 371 aaPredicted RBP21.28■■□□□ 1
HDAC10-203ENST00000415993 NUTM2BA6NNL0 878 aaPredicted RBP21.27■■□□□ 1
HDAC10-203ENST00000415993 NUTM2EB1AL46 878 aaPredicted RBP21.27■■□□□ 1
HDAC10-203ENST00000415993 BECN1Q14457 450 aa21.27■■□□□ 1
HDAC10-203ENST00000415993 NUTM2AQ8IVF1 878 aaPredicted RBP21.27■■□□□ 1
HDAC10-203ENST00000415993 TUBGCP6Q96RT7 1819 aa21.27■□□□□ 0.99
HDAC10-203ENST00000415993 EPHA10Q5JZY3 1008 aa21.26■□□□□ 0.99
HDAC10-203ENST00000415993 TBC1D2Q9BYX2 928 aa21.26■□□□□ 0.99
HDAC10-203ENST00000415993 AOX1Q06278 1338 aa21.26■□□□□ 0.99
HDAC10-203ENST00000415993 SLIT2O94813 1529 aa21.26■□□□□ 0.99
HDAC10-203ENST00000415993 ATP5J2-PTCD1G3V325 749 aa21.26■□□□□ 0.99
HDAC10-203ENST00000415993 KIF2CQ99661 725 aa21.26■□□□□ 0.99
HDAC10-203ENST00000415993 PA2G4Q9UQ80 394 aaKnown RBP21.26■□□□□ 0.99
HDAC10-203ENST00000415993 COL15A1P39059 1388 aa21.26■□□□□ 0.99
HDAC10-203ENST00000415993 NUTM1Q86Y26 1132 aa21.25■□□□□ 0.99
HDAC10-203ENST00000415993 SPATA31A5Q5VU36 1347 aa21.25■□□□□ 0.99
HDAC10-203ENST00000415993 SPATA31A7Q8IWB4 1347 aa21.25■□□□□ 0.99
HDAC10-203ENST00000415993 CASP7P55210 303 aa21.24■□□□□ 0.99
HDAC10-203ENST00000415993 TEX13AQ9BXU3 409 aaPredicted RBP21.24■□□□□ 0.99
HDAC10-203ENST00000415993 NUP188Q5SRE5 1749 aa21.24■□□□□ 0.99
HDAC10-203ENST00000415993 DNAJC10Q8IXB1 793 aa21.24■□□□□ 0.99
HDAC10-203ENST00000415993 UBAP1LF5GYI3 381 aa21.23■□□□□ 0.99
HDAC10-203ENST00000415993 EIF5BO60841 1220 aaKnown RBP21.23■□□□□ 0.99
HDAC10-203ENST00000415993 SLC4A9Q96Q91 983 aa21.23■□□□□ 0.99
HDAC10-203ENST00000415993 A0A087WZG4 1122 aa21.22■□□□□ 0.99
HDAC10-203ENST00000415993 RABL6Q3YEC7 729 aaPredicted RBP21.22■□□□□ 0.99
HDAC10-203ENST00000415993 UBE3BQ7Z3V4 1068 aa21.22■□□□□ 0.99
HDAC10-203ENST00000415993 PI4K2BQ8TCG2 481 aa21.22■□□□□ 0.99
HDAC10-203ENST00000415993 JARID2Q92833 1246 aaPredicted RBP21.22■□□□□ 0.99
HDAC10-203ENST00000415993 NWD2Q9ULI1 1742 aa21.22■□□□□ 0.99
HDAC10-203ENST00000415993 AFDNP55196 1824 aaKnown RBP21.22■□□□□ 0.99
HDAC10-203ENST00000415993 DDB1Q16531 1140 aa21.22■□□□□ 0.99
HDAC10-203ENST00000415993 CASC1Q6TDU7 716 aa21.22■□□□□ 0.99
HDAC10-203ENST00000415993 USP42Q9H9J4 1324 aaKnown RBP21.21■□□□□ 0.99
HDAC10-203ENST00000415993 OS9Q13438 667 aaPredicted RBP21.21■□□□□ 0.99
HDAC10-203ENST00000415993 ERC1Q8IUD2 1116 aa21.21■□□□□ 0.99
HDAC10-203ENST00000415993 H7C1W4 665 aa21.21■□□□□ 0.99
HDAC10-203ENST00000415993 BARGINQ6ZT62 677 aa21.21■□□□□ 0.99
HDAC10-203ENST00000415993 UNC5CLQ8IV45 518 aa21.21■□□□□ 0.99
HDAC10-203ENST00000415993 RBM42Q9BTD8 480 aaKnown RBP21.21■□□□□ 0.99
HDAC10-203ENST00000415993 USP26Q9BXU7 913 aa21.21■□□□□ 0.99
HDAC10-203ENST00000415993 ZBTB3Q9H5J0 574 aa21.21■□□□□ 0.99
HDAC10-203ENST00000415993 SASH1O94885 1247 aa21.2■□□□□ 0.98
HDAC10-203ENST00000415993 PRIM1P49642 420 aaKnown RBP21.2■□□□□ 0.98
HDAC10-203ENST00000415993 STARD3NLO95772 234 aa21.19■□□□□ 0.98
HDAC10-203ENST00000415993 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.19■□□□□ 0.98
HDAC10-203ENST00000415993 RFX5P48382 616 aaPredicted RBP21.19■□□□□ 0.98
HDAC10-203ENST00000415993 CLASRPQ8N2M8 674 aaKnown RBP21.19■□□□□ 0.98
HDAC10-203ENST00000415993 SYTL4Q96C24 671 aaPredicted RBP21.19■□□□□ 0.98
HDAC10-203ENST00000415993 MARCH10Q8NA82 808 aaPredicted RBP21.18■□□□□ 0.98
HDAC10-203ENST00000415993 KLHDC4Q8TBB5 520 aa21.18■□□□□ 0.98
HDAC10-203ENST00000415993 CWC25Q9NXE8 425 aaPredicted RBP21.18■□□□□ 0.98
HDAC10-203ENST00000415993 CYP19A1P11511 503 aaPredicted RBP21.17■□□□□ 0.98
HDAC10-203ENST00000415993 CCDC191Q8NCU4 936 aa21.17■□□□□ 0.98
HDAC10-203ENST00000415993 DOT1LQ8TEK3 1739 aa21.17■□□□□ 0.98
HDAC10-203ENST00000415993 COPRSQ9NQ92 184 aa21.17■□□□□ 0.98
HDAC10-203ENST00000415993 TTC41PQ6P2S7 1318 aa21.17■□□□□ 0.98
HDAC10-203ENST00000415993 TRIM6-TRIM34B2RNG4 842 aa21.17■□□□□ 0.98
HDAC10-203ENST00000415993 ERC2O15083 957 aa21.17■□□□□ 0.98
HDAC10-203ENST00000415993 G3BP1Q13283 466 aaKnown RBP eCLIP21.17■□□□□ 0.98
HDAC10-203ENST00000415993 CHMLP26374 656 aa21.16■□□□□ 0.98
HDAC10-203ENST00000415993 SNX21Q969T3 373 aa21.16■□□□□ 0.98
HDAC10-203ENST00000415993 RILPL2Q969X0 211 aa21.16■□□□□ 0.98
HDAC10-203ENST00000415993 TJP1Q07157 1748 aa21.16■□□□□ 0.98
HDAC10-203ENST00000415993 FOXO4P98177 505 aa21.16■□□□□ 0.98
HDAC10-203ENST00000415993 PTPN12Q05209 780 aaKnown RBP21.16■□□□□ 0.98
HDAC10-203ENST00000415993 NBR1Q14596 966 aa21.16■□□□□ 0.98
HDAC10-203ENST00000415993 ISCA1Q9BUE6 129 aa21.16■□□□□ 0.98
HDAC10-203ENST00000415993 JCADQ9P266 1359 aa21.15■□□□□ 0.98
HDAC10-203ENST00000415993 BCL9LQ86UU0 1499 aa21.15■□□□□ 0.98
HDAC10-203ENST00000415993 REC8O95072 547 aa21.15■□□□□ 0.98
HDAC10-203ENST00000415993 SIL1Q9H173 461 aa21.15■□□□□ 0.98
HDAC10-203ENST00000415993 TCIRG1Q13488 830 aa21.14■□□□□ 0.97
HDAC10-203ENST00000415993 EAF2Q96CJ1 260 aaPredicted RBP21.14■□□□□ 0.97
HDAC10-203ENST00000415993 ESYT1Q9BSJ8 1104 aa21.14■□□□□ 0.97
HDAC10-203ENST00000415993 ANTXR1Q9H6X2 564 aa21.14■□□□□ 0.97
HDAC10-203ENST00000415993 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.14■□□□□ 0.97
HDAC10-203ENST00000415993 CCDC9Q9Y3X0 531 aaKnown RBP21.14■□□□□ 0.97
HDAC10-203ENST00000415993 TRIM28Q13263 835 aaKnown RBP21.13■□□□□ 0.97
HDAC10-203ENST00000415993 ZNF330Q9Y3S2 320 aaPredicted RBP21.13■□□□□ 0.97
HDAC10-203ENST00000415993 GLRX3O76003 335 aaKnown RBP21.12■□□□□ 0.97
HDAC10-203ENST00000415993 LMBR1LQ6UX01 489 aa21.12■□□□□ 0.97
HDAC10-203ENST00000415993 AACSQ86V21 672 aa21.12■□□□□ 0.97
HDAC10-203ENST00000415993 ECHDC1Q9NTX5 307 aa21.12■□□□□ 0.97
HDAC10-203ENST00000415993 KAT6BQ8WYB5 2073 aa21.12■□□□□ 0.97
HDAC10-203ENST00000415993 IFIT2P09913 472 aaKnown RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms