RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ECHDC1Q9NTX5 307 aa15.05■□□□□ -0
SCN1B-202ENST00000415950 EIF3JO75822 258 aaKnown RBP15.05■□□□□ -0
SCN1B-202ENST00000415950 BRF1Q92994 677 aa15.05■□□□□ -0
SCN1B-202ENST00000415950 KDM6BO15054 1643 aa15.04■□□□□ -0
SCN1B-202ENST00000415950 RPGRIP1LQ68CZ1 1315 aa15.04■□□□□ -0
SCN1B-202ENST00000415950 FSD2A1L4K1 749 aa15.04■□□□□ -0
SCN1B-202ENST00000415950 SKILP12757 684 aa15.04■□□□□ -0
SCN1B-202ENST00000415950 GSPT1P15170 499 aaKnown RBP15.04■□□□□ -0
SCN1B-202ENST00000415950 PIP4K2AP48426 406 aaPredicted RBP15.04■□□□□ -0
SCN1B-202ENST00000415950 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.04■□□□□ -0
SCN1B-202ENST00000415950 CEP135Q66GS9 1140 aa15.04■□□□□ -0
SCN1B-202ENST00000415950 PIK3C2GO75747 1445 aa15.04■□□□□ -0
SCN1B-202ENST00000415950 GOLGA6L10A6NI86 522 aa15.04■□□□□ -0
SCN1B-202ENST00000415950 F13A1P00488 732 aa15.04■□□□□ -0
SCN1B-202ENST00000415950 SH2B1Q9NRF2 756 aaPredicted RBP15.04■□□□□ -0
SCN1B-202ENST00000415950 CHST3Q7LGC8 479 aa15.03■□□□□ -0
SCN1B-202ENST00000415950 PBRM1Q86U86 1689 aa15.03■□□□□ -0
SCN1B-202ENST00000415950 CHMLP26374 656 aa15.03■□□□□ -0
SCN1B-202ENST00000415950 CCDC144CPQ8IYA2 1237 aa15.03■□□□□ -0
SCN1B-202ENST00000415950 COL17A1Q9UMD9 1497 aaPredicted RBP15.03■□□□□ -0
SCN1B-202ENST00000415950 ZMYM4Q5VZL5 1548 aa15.03■□□□□ -0
SCN1B-202ENST00000415950 WASLO00401 505 aaPredicted RBP15.03■□□□□ -0
SCN1B-202ENST00000415950 ATP5J2-PTCD1G3V325 749 aa15.02■□□□□ -0
SCN1B-202ENST00000415950 EPB41L2O43491 1005 aaKnown RBP15.02■□□□□ -0
SCN1B-202ENST00000415950 PTCD1O75127 700 aaKnown RBP15.02■□□□□ -0
SCN1B-202ENST00000415950 DDX46Q7L014 1031 aaKnown RBP15.02■□□□□ -0
SCN1B-202ENST00000415950 TCOF1Q13428 1488 aaKnown RBP15.02■□□□□ -0
SCN1B-202ENST00000415950 CCDC69A6NI79 296 aa15.02■□□□□ -0
SCN1B-202ENST00000415950 FAM200AQ8TCP9 573 aa15.02□□□□□ -0.01
SCN1B-202ENST00000415950 ANO10Q9NW15 660 aa15.02□□□□□ -0.01
SCN1B-202ENST00000415950 RNF216Q9NWF9 866 aaPredicted RBP15.02□□□□□ -0.01
SCN1B-202ENST00000415950 RBM8AQ9Y5S9 174 aaKnown RBP15.02□□□□□ -0.01
SCN1B-202ENST00000415950 ATP10BO94823 1461 aa15.02□□□□□ -0.01
SCN1B-202ENST00000415950 CBFA2T2O43439 604 aa15.02□□□□□ -0.01
SCN1B-202ENST00000415950 DNA2P51530 1060 aa15.02□□□□□ -0.01
SCN1B-202ENST00000415950 TYRO3Q06418 890 aa15.02□□□□□ -0.01
SCN1B-202ENST00000415950 A2MP01023 1474 aa15.01□□□□□ -0.01
SCN1B-202ENST00000415950 PTPRCP08575 1304 aa15.01□□□□□ -0.01
SCN1B-202ENST00000415950 IDH1O75874 414 aaKnown RBP15.01□□□□□ -0.01
SCN1B-202ENST00000415950 STRN4Q9NRL3 753 aa15.01□□□□□ -0.01
SCN1B-202ENST00000415950 GPT2Q8TD30 523 aa15.01□□□□□ -0.01
SCN1B-202ENST00000415950 MYD88Q99836 296 aa15.01□□□□□ -0.01
SCN1B-202ENST00000415950 CEP126Q9P2H0 1117 aa15.01□□□□□ -0.01
SCN1B-202ENST00000415950 PALD1Q9ULE6 856 aa15.01□□□□□ -0.01
SCN1B-202ENST00000415950 FAM135AQ9P2D6 1515 aa15.01□□□□□ -0.01
SCN1B-202ENST00000415950 BLMP54132 1417 aaPredicted RBP15.01□□□□□ -0.01
SCN1B-202ENST00000415950 RIOK3O14730 519 aaKnown RBP15.01□□□□□ -0.01
SCN1B-202ENST00000415950 EIF5P55010 431 aaKnown RBP15.01□□□□□ -0.01
SCN1B-202ENST00000415950 ZNF521Q96K83 1311 aa15□□□□□ -0.01
SCN1B-202ENST00000415950 ANKRD62A6NC57 917 aa15□□□□□ -0.01
SCN1B-202ENST00000415950 UVSSAQ2YD98 709 aa15□□□□□ -0.01
SCN1B-202ENST00000415950 CCDC94Q9BW85 323 aaPredicted RBP15□□□□□ -0.01
SCN1B-202ENST00000415950 ZNF445P59923 1031 aa15□□□□□ -0.01
SCN1B-202ENST00000415950 STIM1Q13586 685 aa15□□□□□ -0.01
SCN1B-202ENST00000415950 DDX19AQ9NUU7 478 aaKnown RBP15□□□□□ -0.01
SCN1B-202ENST00000415950 DHX8Q14562 1220 aaKnown RBP15□□□□□ -0.01
SCN1B-202ENST00000415950 PHAXQ9H814 394 aaKnown RBP15□□□□□ -0.01
SCN1B-202ENST00000415950 DACH1Q9UI36 760 aa15□□□□□ -0.01
SCN1B-202ENST00000415950 MAP3K2Q9Y2U5 619 aa15□□□□□ -0.01
SCN1B-202ENST00000415950 KIF4BQ2VIQ3 1234 aa15□□□□□ -0.01
SCN1B-202ENST00000415950 TRMT2AQ8IZ69 625 aaKnown RBP15□□□□□ -0.01
SCN1B-202ENST00000415950 MYO6Q9UM54 1294 aa15□□□□□ -0.01
SCN1B-202ENST00000415950 CCDC57Q2TAC2 916 aa14.99□□□□□ -0.01
SCN1B-202ENST00000415950 C8orf76Q96K31 380 aa14.99□□□□□ -0.01
SCN1B-202ENST00000415950 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.99□□□□□ -0.01
SCN1B-202ENST00000415950 PNMA6EA0A0J9YXQ4 647 aa14.99□□□□□ -0.01
SCN1B-202ENST00000415950 LMOD1P29536 600 aaPredicted RBP14.99□□□□□ -0.01
SCN1B-202ENST00000415950 SNW1Q13573 536 aaKnown RBP14.99□□□□□ -0.01
SCN1B-202ENST00000415950 EIF4A2Q14240 407 aaKnown RBP14.99□□□□□ -0.01
SCN1B-202ENST00000415950 KRT32Q14532 448 aa14.99□□□□□ -0.01
SCN1B-202ENST00000415950 SYCP1Q15431 976 aa14.99□□□□□ -0.01
SCN1B-202ENST00000415950 BBXQ8WY36 941 aaPredicted RBP14.99□□□□□ -0.01
SCN1B-202ENST00000415950 DNAI1Q9UI46 699 aa14.99□□□□□ -0.01
SCN1B-202ENST00000415950 MAGI3Q5TCQ9 1506 aa14.99□□□□□ -0.01
SCN1B-202ENST00000415950 GOLIM4O00461 696 aa14.99□□□□□ -0.01
SCN1B-202ENST00000415950 KIAA1328Q86T90 577 aa14.99□□□□□ -0.01
SCN1B-202ENST00000415950 CRACR2AQ9BSW2 395 aa14.99□□□□□ -0.01
SCN1B-202ENST00000415950 NACAP1Q9BZK3 213 aa14.99□□□□□ -0.01
SCN1B-202ENST00000415950 CHPF2Q9P2E5 772 aa14.99□□□□□ -0.01
SCN1B-202ENST00000415950 ATF3P18847 181 aa14.98□□□□□ -0.01
SCN1B-202ENST00000415950 TDO2P48775 406 aa14.98□□□□□ -0.01
SCN1B-202ENST00000415950 SEPT11Q9NVA2 429 aaKnown RBP14.98□□□□□ -0.01
SCN1B-202ENST00000415950 MAGI2Q86UL8 1455 aa14.98□□□□□ -0.01
SCN1B-202ENST00000415950 ENOX2Q16206 610 aaKnown RBP14.98□□□□□ -0.01
SCN1B-202ENST00000415950 HS1BP3Q53T59 392 aa14.98□□□□□ -0.01
SCN1B-202ENST00000415950 NSFL1CQ9UNZ2 370 aaKnown RBP14.98□□□□□ -0.01
SCN1B-202ENST00000415950 ANKRD36BQ8N2N9 1353 aa14.98□□□□□ -0.01
SCN1B-202ENST00000415950 ATP8B2P98198 1209 aa14.98□□□□□ -0.01
SCN1B-202ENST00000415950 AOPEPQ8N6M6 819 aa14.98□□□□□ -0.01
SCN1B-202ENST00000415950 SMTNL1A8MU46 457 aa14.98□□□□□ -0.01
SCN1B-202ENST00000415950 TOP1P11387 765 aaKnown RBP14.98□□□□□ -0.01
SCN1B-202ENST00000415950 MTHFSDQ2M296 383 aaKnown RBP14.98□□□□□ -0.01
SCN1B-202ENST00000415950 SLC3A2P08195 630 aaKnown RBP14.97□□□□□ -0.01
SCN1B-202ENST00000415950 UHRF1BP1Q6BDS2 1440 aa14.97□□□□□ -0.01
SCN1B-202ENST00000415950 ERLIN2O94905 339 aa14.97□□□□□ -0.01
SCN1B-202ENST00000415950 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
SCN1B-202ENST00000415950 UBAC1Q9BSL1 405 aa14.97□□□□□ -0.01
SCN1B-202ENST00000415950 DNAJC5Q9H3Z4 198 aa14.97□□□□□ -0.01
SCN1B-202ENST00000415950 NEK1Q96PY6 1258 aa14.97□□□□□ -0.01
SCN1B-202ENST00000415950 NDUFB9Q9Y6M9 179 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms