RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 BCL2L13Q9BXK5 485 aa18.46■□□□□ 0.54
SGCE-202ENST00000415788 FLIIQ13045 1269 aa18.45■□□□□ 0.54
SGCE-202ENST00000415788 PHAXQ9H814 394 aaKnown RBP18.45■□□□□ 0.54
SGCE-202ENST00000415788 NARFQ9UHQ1 456 aa18.44■□□□□ 0.54
SGCE-202ENST00000415788 PTPRCP08575 1304 aa18.44■□□□□ 0.54
SGCE-202ENST00000415788 ERVV-1B6SEH8 477 aa18.43■□□□□ 0.54
SGCE-202ENST00000415788 ZPR1O75312 459 aa18.43■□□□□ 0.54
SGCE-202ENST00000415788 AIMP1Q12904 312 aaKnown RBP18.43■□□□□ 0.54
SGCE-202ENST00000415788 COL23A1Q86Y22 540 aaPredicted RBP18.43■□□□□ 0.54
SGCE-202ENST00000415788 ARXQ96QS3 562 aa18.43■□□□□ 0.54
SGCE-202ENST00000415788 QSER1Q2KHR3 1735 aa18.43■□□□□ 0.54
SGCE-202ENST00000415788 TBC1D2BQ9UPU7 963 aa18.43■□□□□ 0.54
SGCE-202ENST00000415788 MAP3K15Q6ZN16 1313 aa18.43■□□□□ 0.54
SGCE-202ENST00000415788 USP42Q9H9J4 1324 aaKnown RBP18.43■□□□□ 0.54
SGCE-202ENST00000415788 CACNA1FO60840 1977 aa18.42■□□□□ 0.54
SGCE-202ENST00000415788 FKBP5Q13451 457 aaPredicted RBP18.42■□□□□ 0.54
SGCE-202ENST00000415788 TTLL7Q6ZT98 887 aa18.42■□□□□ 0.54
SGCE-202ENST00000415788 ANKRD13DQ6ZTN6 518 aa18.42■□□□□ 0.54
SGCE-202ENST00000415788 G2E3Q7L622 706 aa18.42■□□□□ 0.54
SGCE-202ENST00000415788 PLBD2Q8NHP8 589 aa18.42■□□□□ 0.54
SGCE-202ENST00000415788 IPO8O15397 1037 aaKnown RBP18.41■□□□□ 0.54
SGCE-202ENST00000415788 BCAR3O75815 825 aa18.41■□□□□ 0.54
SGCE-202ENST00000415788 CAMTA2O94983 1202 aa18.41■□□□□ 0.54
SGCE-202ENST00000415788 SMIM5Q71RC9 77 aa18.41■□□□□ 0.54
SGCE-202ENST00000415788 ARHGAP45Q92619 1136 aa18.41■□□□□ 0.54
SGCE-202ENST00000415788 ZNF652Q9Y2D9 606 aa18.41■□□□□ 0.54
SGCE-202ENST00000415788 R3HDM1Q15032 1099 aaKnown RBP18.41■□□□□ 0.54
SGCE-202ENST00000415788 CLEC4GQ6UXB4 293 aa18.41■□□□□ 0.54
SGCE-202ENST00000415788 KSR2Q6VAB6 950 aa18.41■□□□□ 0.54
SGCE-202ENST00000415788 ANP32AP39687 249 aaKnown RBP18.4■□□□□ 0.54
SGCE-202ENST00000415788 SLC16A10Q8TF71 515 aa18.4■□□□□ 0.54
SGCE-202ENST00000415788 RIC3Q7Z5B4 369 aa18.39■□□□□ 0.54
SGCE-202ENST00000415788 ZBTB3Q9H5J0 574 aa18.39■□□□□ 0.54
SGCE-202ENST00000415788 NOB1Q9ULX3 412 aaKnown RBP18.39■□□□□ 0.54
SGCE-202ENST00000415788 TUBGCP6Q96RT7 1819 aa18.39■□□□□ 0.53
SGCE-202ENST00000415788 HSP90AB3PQ58FF7 597 aa18.39■□□□□ 0.53
SGCE-202ENST00000415788 USPL1Q5W0Q7 1092 aa18.39■□□□□ 0.53
SGCE-202ENST00000415788 GIGYF2Q6Y7W6 1299 aaKnown RBP18.39■□□□□ 0.53
SGCE-202ENST00000415788 API5Q9BZZ5 524 aaKnown RBP18.39■□□□□ 0.53
SGCE-202ENST00000415788 PI4KAP2A4QPH2 592 aa18.38■□□□□ 0.53
SGCE-202ENST00000415788 C4AP0C0L4 1744 aa18.38■□□□□ 0.53
SGCE-202ENST00000415788 PI4KAP1Q8N8J0 262 aa18.38■□□□□ 0.53
SGCE-202ENST00000415788 IPO9Q96P70 1041 aaKnown RBP18.38■□□□□ 0.53
SGCE-202ENST00000415788 SRP68Q9UHB9 627 aaKnown RBP18.38■□□□□ 0.53
SGCE-202ENST00000415788 GYS1P13807 737 aa18.37■□□□□ 0.53
SGCE-202ENST00000415788 ZKSCAN2Q63HK3 967 aa18.37■□□□□ 0.53
SGCE-202ENST00000415788 NLGN1Q8N2Q7 840 aa18.37■□□□□ 0.53
SGCE-202ENST00000415788 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.37■□□□□ 0.53
SGCE-202ENST00000415788 ADCY9O60503 1353 aa18.37■□□□□ 0.53
SGCE-202ENST00000415788 DNAAF4Q8WXU2 420 aa18.37■□□□□ 0.53
SGCE-202ENST00000415788 FRAT1Q92837 279 aaPredicted RBP18.37■□□□□ 0.53
SGCE-202ENST00000415788 CCDC136Q96JN2 1154 aa18.37■□□□□ 0.53
SGCE-202ENST00000415788 MAP3K2Q9Y2U5 619 aa18.37■□□□□ 0.53
SGCE-202ENST00000415788 SCN7AQ01118 1682 aa18.36■□□□□ 0.53
SGCE-202ENST00000415788 ATF7IPQ6VMQ6 1270 aa18.36■□□□□ 0.53
SGCE-202ENST00000415788 BCL2L12Q9HB09 334 aa18.36■□□□□ 0.53
SGCE-202ENST00000415788 HLFQ16534 295 aa18.35■□□□□ 0.53
SGCE-202ENST00000415788 METTL22Q9BUU2 404 aaPredicted RBP18.35■□□□□ 0.53
SGCE-202ENST00000415788 ATP10DQ9P241 1426 aa18.35■□□□□ 0.53
SGCE-202ENST00000415788 PSDA5PKW4 1024 aaPredicted RBP18.35■□□□□ 0.53
SGCE-202ENST00000415788 NEXNQ0ZGT2 675 aa18.35■□□□□ 0.53
SGCE-202ENST00000415788 TCIRG1Q13488 830 aa18.35■□□□□ 0.53
SGCE-202ENST00000415788 BCORQ6W2J9 1755 aa18.35■□□□□ 0.53
SGCE-202ENST00000415788 MS4A1P11836 297 aa18.33■□□□□ 0.53
SGCE-202ENST00000415788 TRIM27P14373 513 aa18.33■□□□□ 0.53
SGCE-202ENST00000415788 PDGFDQ9GZP0 370 aaPredicted RBP18.33■□□□□ 0.53
SGCE-202ENST00000415788 MTFR1LQ9H019 292 aa18.33■□□□□ 0.53
SGCE-202ENST00000415788 PXDNLA1KZ92 1463 aa18.33■□□□□ 0.52
SGCE-202ENST00000415788 F6X3S4 739 aa18.33■□□□□ 0.52
SGCE-202ENST00000415788 CASZ1Q86V15 1759 aa18.32■□□□□ 0.52
SGCE-202ENST00000415788 TRIM28Q13263 835 aaKnown RBP18.32■□□□□ 0.52
SGCE-202ENST00000415788 ZNF34Q8IZ26 560 aa18.32■□□□□ 0.52
SGCE-202ENST00000415788 LINS1Q8NG48 757 aa18.32■□□□□ 0.52
SGCE-202ENST00000415788 SETDB2Q96T68 719 aa18.32■□□□□ 0.52
SGCE-202ENST00000415788 NIP7Q9Y221 180 aaKnown RBP eCLIP18.32■□□□□ 0.52
SGCE-202ENST00000415788 PARP10Q53GL7 1025 aa18.31■□□□□ 0.52
SGCE-202ENST00000415788 TBC1D9BQ66K14 1250 aa18.31■□□□□ 0.52
SGCE-202ENST00000415788 MYD88Q99836 296 aa18.31■□□□□ 0.52
SGCE-202ENST00000415788 ISCA1Q9BUE6 129 aa18.31■□□□□ 0.52
SGCE-202ENST00000415788 ZBTB47Q9UFB7 747 aaPredicted RBP18.31■□□□□ 0.52
SGCE-202ENST00000415788 ABCC4O15439 1325 aa18.31■□□□□ 0.52
SGCE-202ENST00000415788 ARFGEF2Q9Y6D5 1785 aa18.31■□□□□ 0.52
SGCE-202ENST00000415788 SLC4A10Q6U841 1118 aa18.31■□□□□ 0.52
SGCE-202ENST00000415788 FTSJ3Q8IY81 847 aaKnown RBP18.31■□□□□ 0.52
SGCE-202ENST00000415788 TM4SF1P30408 202 aa18.3■□□□□ 0.52
SGCE-202ENST00000415788 CCT4P50991 539 aaKnown RBP18.3■□□□□ 0.52
SGCE-202ENST00000415788 RRP1P56182 461 aaKnown RBP18.3■□□□□ 0.52
SGCE-202ENST00000415788 NFIXQ14938 502 aa18.3■□□□□ 0.52
SGCE-202ENST00000415788 RTL5Q5HYW3 569 aaPredicted RBP18.3■□□□□ 0.52
SGCE-202ENST00000415788 BEND3Q5T5X7 828 aa18.3■□□□□ 0.52
SGCE-202ENST00000415788 CCDC191Q8NCU4 936 aa18.3■□□□□ 0.52
SGCE-202ENST00000415788 CARMIL3Q8ND23 1372 aa18.3■□□□□ 0.52
SGCE-202ENST00000415788 IBTKQ9P2D0 1353 aaPredicted RBP18.3■□□□□ 0.52
SGCE-202ENST00000415788 DZIP1LQ8IYY4 767 aaKnown RBP18.29■□□□□ 0.52
SGCE-202ENST00000415788 SRCIN1Q9C0H9 1055 aa18.29■□□□□ 0.52
SGCE-202ENST00000415788 ALDH1L1O75891 902 aa18.29■□□□□ 0.52
SGCE-202ENST00000415788 ZBTB7AO95365 584 aa18.29■□□□□ 0.52
SGCE-202ENST00000415788 GPTP24298 496 aa18.29■□□□□ 0.52
SGCE-202ENST00000415788 MSL1Q68DK7 614 aa18.29■□□□□ 0.52
SGCE-202ENST00000415788 BICDL1Q6ZP65 573 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms