RNA–Protein interactions for RNA: ENST00000415332.1

SYNGR1-206, Transcript of synaptogyrin 1, humanhuman

TSL 3

Gene SYNGR1, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-206ENST00000415332 KIF7Q2M1P5 1343 aa21.55■■□□□ 1.04
SYNGR1-206ENST00000415332 GNAT3A8MTJ3 354 aa21.54■■□□□ 1.04
SYNGR1-206ENST00000415332 PIP4K2AP48426 406 aaPredicted RBP21.54■■□□□ 1.04
SYNGR1-206ENST00000415332 STYK1Q6J9G0 422 aa21.54■■□□□ 1.04
SYNGR1-206ENST00000415332 PASKQ96RG2 1323 aa21.53■■□□□ 1.04
SYNGR1-206ENST00000415332 U2SURPO15042 1029 aaKnown RBP21.52■■□□□ 1.04
SYNGR1-206ENST00000415332 NPHP1O15259 732 aa21.52■■□□□ 1.04
SYNGR1-206ENST00000415332 FOXN1O15353 648 aa21.52■■□□□ 1.04
SYNGR1-206ENST00000415332 MASTLQ96GX5 879 aa21.52■■□□□ 1.04
SYNGR1-206ENST00000415332 FMNL2Q96PY5 1086 aa21.52■■□□□ 1.04
SYNGR1-206ENST00000415332 CNTNAP1P78357 1384 aa21.51■■□□□ 1.03
SYNGR1-206ENST00000415332 ST5P78524 1137 aa21.51■■□□□ 1.03
SYNGR1-206ENST00000415332 DZIP3Q86Y13 1208 aaKnown RBP21.51■■□□□ 1.03
SYNGR1-206ENST00000415332 GAS2L2Q8NHY3 880 aa21.51■■□□□ 1.03
SYNGR1-206ENST00000415332 C7orf43Q8WVR3 580 aa21.51■■□□□ 1.03
SYNGR1-206ENST00000415332 USP16Q9Y5T5 823 aa21.51■■□□□ 1.03
SYNGR1-206ENST00000415332 PRAMEF22A3QJZ6 481 aa21.5■■□□□ 1.03
SYNGR1-206ENST00000415332 CNGB1Q14028 1251 aaPredicted RBP21.5■■□□□ 1.03
SYNGR1-206ENST00000415332 TAF1DQ9H5J8 278 aaPredicted RBP21.5■■□□□ 1.03
SYNGR1-206ENST00000415332 CEMIPQ8WUJ3 1361 aa21.49■■□□□ 1.03
SYNGR1-206ENST00000415332 OLFM4Q6UX06 510 aa21.49■■□□□ 1.03
SYNGR1-206ENST00000415332 SOGA3Q5TF21 947 aa21.48■■□□□ 1.03
SYNGR1-206ENST00000415332 NPM2Q86SE8 214 aaKnown RBP21.48■■□□□ 1.03
SYNGR1-206ENST00000415332 LDHDQ86WU2 507 aa21.48■■□□□ 1.03
SYNGR1-206ENST00000415332 L3MBTL3Q96JM7 780 aaPredicted RBP21.48■■□□□ 1.03
SYNGR1-206ENST00000415332 PHACTR3Q96KR7 559 aa21.48■■□□□ 1.03
SYNGR1-206ENST00000415332 ZNF541Q9H0D2 1346 aa21.48■■□□□ 1.03
SYNGR1-206ENST00000415332 ADAMTSL1Q8N6G6 1762 aa21.48■■□□□ 1.03
SYNGR1-206ENST00000415332 IQCA1LA6NCM1 817 aa21.47■■□□□ 1.03
SYNGR1-206ENST00000415332 BTBD11A6QL63 1104 aa21.47■■□□□ 1.03
SYNGR1-206ENST00000415332 ITGBL1O95965 494 aaPredicted RBP21.47■■□□□ 1.03
SYNGR1-206ENST00000415332 VEGFBP49765 207 aa21.47■■□□□ 1.03
SYNGR1-206ENST00000415332 CCDC93Q567U6 631 aa21.46■■□□□ 1.03
SYNGR1-206ENST00000415332 NBPF5PQ86XG9 351 aaPredicted RBP21.46■■□□□ 1.03
SYNGR1-206ENST00000415332 ZNF277Q9NRM2 450 aaPredicted RBP21.46■■□□□ 1.03
SYNGR1-206ENST00000415332 EAPPQ56P03 285 aaPredicted RBP21.45■■□□□ 1.02
SYNGR1-206ENST00000415332 FKBP4Q02790 459 aaKnown RBP eCLIP21.44■■□□□ 1.02
SYNGR1-206ENST00000415332 PRDM10Q9NQV6 1147 aa21.44■■□□□ 1.02
SYNGR1-206ENST00000415332 KLRG2A4D1S0 409 aaPredicted RBP21.43■■□□□ 1.02
SYNGR1-206ENST00000415332 TMEM88BA6NKF7 163 aa21.43■■□□□ 1.02
SYNGR1-206ENST00000415332 NPR1P16066 1061 aa21.43■■□□□ 1.02
SYNGR1-206ENST00000415332 FAM177BA6PVY3 158 aa21.42■■□□□ 1.02
SYNGR1-206ENST00000415332 PRKAR2BP31323 418 aa21.42■■□□□ 1.02
SYNGR1-206ENST00000415332 CLEC4GQ6UXB4 293 aa21.42■■□□□ 1.02
SYNGR1-206ENST00000415332 CLEC11AQ9Y240 323 aa21.42■■□□□ 1.02
SYNGR1-206ENST00000415332 RNF123Q5XPI4 1314 aa21.41■■□□□ 1.02
SYNGR1-206ENST00000415332 NBPF26B4DH59 902 aa21.41■■□□□ 1.02
SYNGR1-206ENST00000415332 CTCFP49711 727 aaPredicted RBP21.41■■□□□ 1.02
SYNGR1-206ENST00000415332 NBPF10Q6P3W6 841 aaKnown RBP21.41■■□□□ 1.02
SYNGR1-206ENST00000415332 NBPF15Q8N660 670 aa21.41■■□□□ 1.02
SYNGR1-206ENST00000415332 RSPH6AQ9H0K4 717 aa21.41■■□□□ 1.02
SYNGR1-206ENST00000415332 HACL1Q9UJ83 578 aa21.41■■□□□ 1.02
SYNGR1-206ENST00000415332 NIP7Q9Y221 180 aaKnown RBP eCLIP21.41■■□□□ 1.02
SYNGR1-206ENST00000415332 EPHX2P34913 555 aa21.4■■□□□ 1.02
SYNGR1-206ENST00000415332 MAP1SQ66K74 1059 aaPredicted RBP21.4■■□□□ 1.02
SYNGR1-206ENST00000415332 WBP1LQ9NX94 342 aa21.4■■□□□ 1.02
SYNGR1-206ENST00000415332 LBX1P52954 281 aa21.39■■□□□ 1.01
SYNGR1-206ENST00000415332 TPTE2Q6XPS3 522 aa21.39■■□□□ 1.01
SYNGR1-206ENST00000415332 MCM10Q7L590 875 aa21.39■■□□□ 1.01
SYNGR1-206ENST00000415332 AIDAQ96BJ3 306 aa21.39■■□□□ 1.01
SYNGR1-206ENST00000415332 ZNF652Q9Y2D9 606 aa21.39■■□□□ 1.01
SYNGR1-206ENST00000415332 NPC1L1Q9UHC9 1359 aa21.38■■□□□ 1.01
SYNGR1-206ENST00000415332 FZD9O00144 591 aa21.38■■□□□ 1.01
SYNGR1-206ENST00000415332 SNRPA1P09661 255 aaKnown RBP21.38■■□□□ 1.01
SYNGR1-206ENST00000415332 IARSP41252 1262 aaKnown RBP21.38■■□□□ 1.01
SYNGR1-206ENST00000415332 HLFQ16534 295 aa21.38■■□□□ 1.01
SYNGR1-206ENST00000415332 CNTROBQ8N137 903 aa21.38■■□□□ 1.01
SYNGR1-206ENST00000415332 SYNE4Q8N205 404 aa21.38■■□□□ 1.01
SYNGR1-206ENST00000415332 NUP98P52948 1817 aa21.38■■□□□ 1.01
SYNGR1-206ENST00000415332 LTBP1Q14766 1721 aa21.38■■□□□ 1.01
SYNGR1-206ENST00000415332 SNED1Q8TER0 1413 aa21.38■■□□□ 1.01
SYNGR1-206ENST00000415332 COL4A5P29400 1685 aa21.37■■□□□ 1.01
SYNGR1-206ENST00000415332 DCTN1Q14203 1278 aa21.37■■□□□ 1.01
SYNGR1-206ENST00000415332 RTKN2Q8IZC4 609 aa21.37■■□□□ 1.01
SYNGR1-206ENST00000415332 CCER1Q8TC90 406 aaPredicted RBP21.36■■□□□ 1.01
SYNGR1-206ENST00000415332 RASSF10A6NK89 507 aa21.35■■□□□ 1.01
SYNGR1-206ENST00000415332 DEFB115Q30KQ5 88 aa21.35■■□□□ 1.01
SYNGR1-206ENST00000415332 LAMB4A4D0S4 1761 aa21.34■■□□□ 1.01
SYNGR1-206ENST00000415332 HSPA8P11142 646 aaKnown RBP21.34■■□□□ 1.01
SYNGR1-206ENST00000415332 FMR1Q06787 632 aaKnown RBP eCLIP21.34■■□□□ 1.01
SYNGR1-206ENST00000415332 SLC51AQ86UW1 340 aa21.34■■□□□ 1.01
SYNGR1-206ENST00000415332 PNMA8AQ86V59 439 aaPredicted RBP21.34■■□□□ 1.01
SYNGR1-206ENST00000415332 ABCC12Q96J65 1359 aa21.34■■□□□ 1.01
SYNGR1-206ENST00000415332 ALDH1B1P30837 517 aa21.33■■□□□ 1.01
SYNGR1-206ENST00000415332 GPC2Q8N158 579 aa21.33■■□□□ 1.01
SYNGR1-206ENST00000415332 TRPM7Q96QT4 1865 aa21.32■■□□□ 1
SYNGR1-206ENST00000415332 WDR33Q9C0J8 1336 aaKnown RBP21.32■■□□□ 1
SYNGR1-206ENST00000415332 NUTM1Q86Y26 1132 aa21.32■■□□□ 1
SYNGR1-206ENST00000415332 DLG5Q8TDM6 1919 aa21.31■■□□□ 1
SYNGR1-206ENST00000415332 RGL2O15211 777 aa21.31■■□□□ 1
SYNGR1-206ENST00000415332 RTF1Q92541 710 aaKnown RBP21.31■■□□□ 1
SYNGR1-206ENST00000415332 MIS18AQ9NYP9 233 aa21.31■■□□□ 1
SYNGR1-206ENST00000415332 ABT1Q9ULW3 272 aaKnown RBP21.31■■□□□ 1
SYNGR1-206ENST00000415332 GJA3Q9Y6H8 435 aa21.31■■□□□ 1
SYNGR1-206ENST00000415332 GTF2E1P29083 439 aaPredicted RBP21.3■■□□□ 1
SYNGR1-206ENST00000415332 NGEFQ8N5V2 710 aa21.3■■□□□ 1
SYNGR1-206ENST00000415332 PSMD1Q99460 953 aa21.3■■□□□ 1
SYNGR1-206ENST00000415332 U2AF1L5P0DN76 240 aaPredicted RBP21.29■■□□□ 1
SYNGR1-206ENST00000415332 U2AF1Q01081 240 aaKnown RBP eCLIP21.29■■□□□ 1
SYNGR1-206ENST00000415332 CRY2Q49AN0 593 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms