RNA–Protein interactions for RNA: ENST00000415191.6

C2CD3-205, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 2,587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-205ENST00000415191 GDPD2Q9HCC8 539 aa23.47■■□□□ 1.35
C2CD3-205ENST00000415191 ECHDC1Q9NTX5 307 aa23.47■■□□□ 1.35
C2CD3-205ENST00000415191 OVOS2A0A0G2JMS6 1433 aa23.46■■□□□ 1.35
C2CD3-205ENST00000415191 HEG1Q9ULI3 1381 aa23.46■■□□□ 1.35
C2CD3-205ENST00000415191 IFIT2P09913 472 aaKnown RBP23.46■■□□□ 1.35
C2CD3-205ENST00000415191 GPATCH3Q96I76 525 aa23.45■■□□□ 1.34
C2CD3-205ENST00000415191 AXIN2Q9Y2T1 843 aa23.45■■□□□ 1.34
C2CD3-205ENST00000415191 RUFY3Q7L099 469 aa23.45■■□□□ 1.34
C2CD3-205ENST00000415191 ERC1Q8IUD2 1116 aa23.45■■□□□ 1.34
C2CD3-205ENST00000415191 RUFY2Q8WXA3 655 aa23.45■■□□□ 1.34
C2CD3-205ENST00000415191 HYPKQ9NX55 129 aa23.45■■□□□ 1.34
C2CD3-205ENST00000415191 HDAC5Q9UQL6 1122 aa23.45■■□□□ 1.34
C2CD3-205ENST00000415191 RPAP1Q9BWH6 1393 aaPredicted RBP23.44■■□□□ 1.34
C2CD3-205ENST00000415191 PDLIM2Q96JY6 352 aa23.44■■□□□ 1.34
C2CD3-205ENST00000415191 LIMCH1Q9UPQ0 1083 aa23.44■■□□□ 1.34
C2CD3-205ENST00000415191 SLIT3O75094 1523 aa23.44■■□□□ 1.34
C2CD3-205ENST00000415191 CPA1P15085 419 aa23.44■■□□□ 1.34
C2CD3-205ENST00000415191 CASTP20810 708 aaKnown RBP23.44■■□□□ 1.34
C2CD3-205ENST00000415191 AACSQ86V21 672 aa23.44■■□□□ 1.34
C2CD3-205ENST00000415191 GADD45BO75293 160 aaPredicted RBP23.43■■□□□ 1.34
C2CD3-205ENST00000415191 AIMP1Q12904 312 aaKnown RBP23.43■■□□□ 1.34
C2CD3-205ENST00000415191 USP48Q86UV5 1035 aa23.43■■□□□ 1.34
C2CD3-205ENST00000415191 MSNP26038 577 aaKnown RBP23.43■■□□□ 1.34
C2CD3-205ENST00000415191 PTH1RQ03431 593 aa23.43■■□□□ 1.34
C2CD3-205ENST00000415191 LINS1Q8NG48 757 aa23.43■■□□□ 1.34
C2CD3-205ENST00000415191 GRM8O00222 908 aa23.42■■□□□ 1.34
C2CD3-205ENST00000415191 SYAP1Q96A49 352 aaPredicted RBP23.42■■□□□ 1.34
C2CD3-205ENST00000415191 RNF214Q8ND24 703 aa23.42■■□□□ 1.34
C2CD3-205ENST00000415191 SUCLG2Q96I99 432 aa23.42■■□□□ 1.34
C2CD3-205ENST00000415191 SIPA1L3O60292 1781 aaPredicted RBP23.41■■□□□ 1.34
C2CD3-205ENST00000415191 ZNF142P52746 1687 aaPredicted RBP23.41■■□□□ 1.34
C2CD3-205ENST00000415191 PRPF40BQ6NWY9 871 aaKnown RBP23.41■■□□□ 1.34
C2CD3-205ENST00000415191 DDX58O95786 925 aaKnown RBP23.4■■□□□ 1.34
C2CD3-205ENST00000415191 HS1BP3Q53T59 392 aa23.4■■□□□ 1.34
C2CD3-205ENST00000415191 KAZALD1Q96I82 304 aa23.4■■□□□ 1.34
C2CD3-205ENST00000415191 BICC1Q9H694 974 aaKnown RBP23.4■■□□□ 1.34
C2CD3-205ENST00000415191 DDX21Q9NR30 783 aaKnown RBP eCLIP23.4■■□□□ 1.34
C2CD3-205ENST00000415191 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.4■■□□□ 1.34
C2CD3-205ENST00000415191 EVI5LQ96CN4 794 aa23.4■■□□□ 1.34
C2CD3-205ENST00000415191 RGPD5Q99666 1765 aa23.39■■□□□ 1.34
C2CD3-205ENST00000415191 ZSCAN22P10073 491 aaPredicted RBP23.39■■□□□ 1.34
C2CD3-205ENST00000415191 JAKMIP1Q96N16 626 aaKnown RBP23.39■■□□□ 1.34
C2CD3-205ENST00000415191 SMC3Q9UQE7 1217 aa23.39■■□□□ 1.34
C2CD3-205ENST00000415191 TRHP20396 242 aaPredicted RBP23.39■■□□□ 1.33
C2CD3-205ENST00000415191 ADCK5Q3MIX3 580 aa23.39■■□□□ 1.33
C2CD3-205ENST00000415191 TSPY26PQ9H489 355 aa23.39■■□□□ 1.33
C2CD3-205ENST00000415191 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.39■■□□□ 1.33
C2CD3-205ENST00000415191 STX6O43752 255 aa23.38■■□□□ 1.33
C2CD3-205ENST00000415191 SASH1O94885 1247 aa23.38■■□□□ 1.33
C2CD3-205ENST00000415191 LARGE1O95461 756 aa23.38■■□□□ 1.33
C2CD3-205ENST00000415191 SYT1P21579 422 aa23.38■■□□□ 1.33
C2CD3-205ENST00000415191 G3BP1Q13283 466 aaKnown RBP eCLIP23.38■■□□□ 1.33
C2CD3-205ENST00000415191 CAMTA1Q9Y6Y1 1673 aa23.38■■□□□ 1.33
C2CD3-205ENST00000415191 SLC39A6Q13433 755 aa23.37■■□□□ 1.33
C2CD3-205ENST00000415191 PDIA6Q15084 440 aa23.37■■□□□ 1.33
C2CD3-205ENST00000415191 KRT28Q7Z3Y7 464 aa23.37■■□□□ 1.33
C2CD3-205ENST00000415191 EAF2Q96CJ1 260 aaPredicted RBP23.37■■□□□ 1.33
C2CD3-205ENST00000415191 PDRG1Q9NUG6 133 aa23.37■■□□□ 1.33
C2CD3-205ENST00000415191 CNPY2Q9Y2B0 182 aa23.37■■□□□ 1.33
C2CD3-205ENST00000415191 CCDC8Q9H0W5 538 aaPredicted RBP23.37■■□□□ 1.33
C2CD3-205ENST00000415191 UTYO14607 1347 aa23.37■■□□□ 1.33
C2CD3-205ENST00000415191 NPHP4O75161 1426 aaPredicted RBP23.36■■□□□ 1.33
C2CD3-205ENST00000415191 CCDC171Q6TFL3 1326 aa23.36■■□□□ 1.33
C2CD3-205ENST00000415191 PHF14O94880 888 aa23.36■■□□□ 1.33
C2CD3-205ENST00000415191 VPS53Q5VIR6 699 aa23.36■■□□□ 1.33
C2CD3-205ENST00000415191 RIC3Q7Z5B4 369 aa23.36■■□□□ 1.33
C2CD3-205ENST00000415191 CCDC83Q8IWF9 413 aa23.36■■□□□ 1.33
C2CD3-205ENST00000415191 TMEM87AQ8NBN3 555 aa23.36■■□□□ 1.33
C2CD3-205ENST00000415191 SIL1Q9H173 461 aa23.36■■□□□ 1.33
C2CD3-205ENST00000415191 NOL7Q9UMY1 257 aaKnown RBP23.36■■□□□ 1.33
C2CD3-205ENST00000415191 CYP46A1Q9Y6A2 500 aa23.36■■□□□ 1.33
C2CD3-205ENST00000415191 ERBB3P21860 1342 aa23.35■■□□□ 1.33
C2CD3-205ENST00000415191 ZC3H6P61129 1189 aaKnown RBP23.35■■□□□ 1.33
C2CD3-205ENST00000415191 IGKV5-2P06315 115 aa23.35■■□□□ 1.33
C2CD3-205ENST00000415191 DDX54Q8TDD1 881 aaKnown RBP23.35■■□□□ 1.33
C2CD3-205ENST00000415191 FAM227BQ96M60 508 aa23.35■■□□□ 1.33
C2CD3-205ENST00000415191 ZSWIM6Q9HCJ5 1215 aa23.35■■□□□ 1.33
C2CD3-205ENST00000415191 TRPM3Q9HCF6 1732 aaPredicted RBP23.35■■□□□ 1.33
C2CD3-205ENST00000415191 MYL6BP14649 208 aa23.34■■□□□ 1.33
C2CD3-205ENST00000415191 NECTIN1Q15223 517 aa23.34■■□□□ 1.33
C2CD3-205ENST00000415191 TPRNQ4KMQ1 711 aa23.34■■□□□ 1.33
C2CD3-205ENST00000415191 ZNF790Q6PG37 636 aa23.34■■□□□ 1.33
C2CD3-205ENST00000415191 DTNBO60941 627 aa23.34■■□□□ 1.33
C2CD3-205ENST00000415191 F13A1P00488 732 aa23.34■■□□□ 1.33
C2CD3-205ENST00000415191 KCNB2Q92953 911 aa23.34■■□□□ 1.33
C2CD3-205ENST00000415191 TM6SF1Q9BZW5 370 aa23.34■■□□□ 1.33
C2CD3-205ENST00000415191 TLR7Q9NYK1 1049 aaKnown RBP23.34■■□□□ 1.33
C2CD3-205ENST00000415191 KCNJ4P48050 445 aa23.33■■□□□ 1.33
C2CD3-205ENST00000415191 RBM8AQ9Y5S9 174 aaKnown RBP23.33■■□□□ 1.33
C2CD3-205ENST00000415191 ADAMTS7Q9UKP4 1686 aa23.33■■□□□ 1.33
C2CD3-205ENST00000415191 ZKSCAN1P17029 563 aaPredicted RBP23.33■■□□□ 1.32
C2CD3-205ENST00000415191 NMIQ13287 307 aaPredicted RBP23.33■■□□□ 1.32
C2CD3-205ENST00000415191 KLHDC4Q8TBB5 520 aa23.33■■□□□ 1.32
C2CD3-205ENST00000415191 RAPGEF4Q8WZA2 1011 aa23.33■■□□□ 1.32
C2CD3-205ENST00000415191 PRKCSHP14314 528 aaPredicted RBP23.32■■□□□ 1.32
C2CD3-205ENST00000415191 GJB2P29033 226 aa23.32■■□□□ 1.32
C2CD3-205ENST00000415191 LARP1Q6PKG0 1096 aaKnown RBP23.32■■□□□ 1.32
C2CD3-205ENST00000415191 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.32■■□□□ 1.32
C2CD3-205ENST00000415191 BOLA2Q9H3K6 86 aa23.32■■□□□ 1.32
C2CD3-205ENST00000415191 HIP1O00291 1037 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms