RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 CNKSR1Q969H4 720 aa25.78■■□□□ 1.72
UBXN4-202ENST00000415164 TAOK3Q9H2K8 898 aa25.78■■□□□ 1.72
UBXN4-202ENST00000415164 FAM177BA6PVY3 158 aa25.77■■□□□ 1.72
UBXN4-202ENST00000415164 PPP2R1AP30153 589 aa25.77■■□□□ 1.72
UBXN4-202ENST00000415164 COL11A2P13942 1736 aaPredicted RBP25.77■■□□□ 1.72
UBXN4-202ENST00000415164 SNRPA1P09661 255 aaKnown RBP25.76■■□□□ 1.71
UBXN4-202ENST00000415164 PRPF40BQ6NWY9 871 aaKnown RBP25.76■■□□□ 1.71
UBXN4-202ENST00000415164 ZNF652Q9Y2D9 606 aa25.76■■□□□ 1.71
UBXN4-202ENST00000415164 STYK1Q6J9G0 422 aa25.75■■□□□ 1.71
UBXN4-202ENST00000415164 MASTLQ96GX5 879 aa25.75■■□□□ 1.71
UBXN4-202ENST00000415164 JMYQ8N9B5 988 aa25.74■■□□□ 1.71
UBXN4-202ENST00000415164 CCDC88AQ3V6T2 1871 aa25.74■■□□□ 1.71
UBXN4-202ENST00000415164 SRGNP10124 158 aa25.73■■□□□ 1.71
UBXN4-202ENST00000415164 POTECB2RU33 542 aa25.72■■□□□ 1.71
UBXN4-202ENST00000415164 NIP7Q9Y221 180 aaKnown RBP eCLIP25.72■■□□□ 1.71
UBXN4-202ENST00000415164 SOGA3Q5TF21 947 aa25.71■■□□□ 1.71
UBXN4-202ENST00000415164 MIS18AQ9NYP9 233 aa25.71■■□□□ 1.71
UBXN4-202ENST00000415164 BCORQ6W2J9 1755 aa25.7■■□□□ 1.7
UBXN4-202ENST00000415164 DDNO94850 711 aaPredicted RBP25.7■■□□□ 1.7
UBXN4-202ENST00000415164 COL13A1Q5TAT6 717 aaPredicted RBP25.7■■□□□ 1.7
UBXN4-202ENST00000415164 NGEFQ8N5V2 710 aa25.7■■□□□ 1.7
UBXN4-202ENST00000415164 LTBP3Q9NS15 1303 aa25.69■■□□□ 1.7
UBXN4-202ENST00000415164 NEFMP07197 916 aa25.69■■□□□ 1.7
UBXN4-202ENST00000415164 GTF2E1P29083 439 aaPredicted RBP25.69■■□□□ 1.7
UBXN4-202ENST00000415164 CLEC4GQ6UXB4 293 aa25.69■■□□□ 1.7
UBXN4-202ENST00000415164 CACNA1SQ13698 1873 aa25.68■■□□□ 1.7
UBXN4-202ENST00000415164 TPTE2Q6XPS3 522 aa25.68■■□□□ 1.7
UBXN4-202ENST00000415164 SLX4Q8IY92 1834 aa25.67■■□□□ 1.7
UBXN4-202ENST00000415164 NBPF26B4DH59 902 aa25.67■■□□□ 1.7
UBXN4-202ENST00000415164 CAPN15O75808 1086 aa25.67■■□□□ 1.7
UBXN4-202ENST00000415164 NPR1P16066 1061 aa25.67■■□□□ 1.7
UBXN4-202ENST00000415164 TAF7Q15545 349 aaPredicted RBP25.67■■□□□ 1.7
UBXN4-202ENST00000415164 CCDC93Q567U6 631 aa25.67■■□□□ 1.7
UBXN4-202ENST00000415164 NBPF10Q6P3W6 841 aaKnown RBP25.67■■□□□ 1.7
UBXN4-202ENST00000415164 NBPF15Q8N660 670 aa25.67■■□□□ 1.7
UBXN4-202ENST00000415164 FER1L6Q2WGJ9 1857 aa25.66■■□□□ 1.7
UBXN4-202ENST00000415164 HTATSF1O43719 755 aaKnown RBP25.65■■□□□ 1.7
UBXN4-202ENST00000415164 POTEIP0CG38 1075 aa25.65■■□□□ 1.7
UBXN4-202ENST00000415164 POTEJP0CG39 1038 aa25.65■■□□□ 1.7
UBXN4-202ENST00000415164 CHADLQ6NUI6 762 aa25.65■■□□□ 1.7
UBXN4-202ENST00000415164 HLFQ16534 295 aa25.64■■□□□ 1.7
UBXN4-202ENST00000415164 OLFM4Q6UX06 510 aa25.64■■□□□ 1.7
UBXN4-202ENST00000415164 HSPA1AP0DMV8 641 aaKnown RBP25.63■■□□□ 1.69
UBXN4-202ENST00000415164 HSPA1BP0DMV9 641 aaKnown RBP25.63■■□□□ 1.69
UBXN4-202ENST00000415164 ZNF277Q9NRM2 450 aaPredicted RBP25.63■■□□□ 1.69
UBXN4-202ENST00000415164 TNS4Q8IZW8 715 aa25.62■■□□□ 1.69
UBXN4-202ENST00000415164 FKBP4Q02790 459 aaKnown RBP eCLIP25.61■■□□□ 1.69
UBXN4-202ENST00000415164 MKRN1Q9UHC7 482 aaKnown RBP25.61■■□□□ 1.69
UBXN4-202ENST00000415164 RRP7AQ9Y3A4 280 aaKnown RBP25.61■■□□□ 1.69
UBXN4-202ENST00000415164 PCNTO95613 3336 aa25.61■■□□□ 1.69
UBXN4-202ENST00000415164 DICER1Q9UPY3 1922 aaKnown RBP25.61■■□□□ 1.69
UBXN4-202ENST00000415164 IQCA1LA6NCM1 817 aa25.6■■□□□ 1.69
UBXN4-202ENST00000415164 EAPPQ56P03 285 aaPredicted RBP25.6■■□□□ 1.69
UBXN4-202ENST00000415164 C7orf43Q8WVR3 580 aa25.6■■□□□ 1.69
UBXN4-202ENST00000415164 MYL6BP14649 208 aa25.59■■□□□ 1.69
UBXN4-202ENST00000415164 KIF6Q6ZMV9 814 aa25.58■■□□□ 1.69
UBXN4-202ENST00000415164 NUTM1Q86Y26 1132 aa25.58■■□□□ 1.69
UBXN4-202ENST00000415164 PNISRQ8TF01 805 aaKnown RBP25.58■■□□□ 1.69
UBXN4-202ENST00000415164 THUMPD2Q9BTF0 503 aaKnown RBP25.58■■□□□ 1.69
UBXN4-202ENST00000415164 ZNF541Q9H0D2 1346 aa25.58■■□□□ 1.69
UBXN4-202ENST00000415164 ARFGEF2Q9Y6D5 1785 aa25.57■■□□□ 1.68
UBXN4-202ENST00000415164 ALDH1B1P30837 517 aa25.57■■□□□ 1.68
UBXN4-202ENST00000415164 RTKN2Q8IZC4 609 aa25.57■■□□□ 1.68
UBXN4-202ENST00000415164 CLEC11AQ9Y240 323 aa25.57■■□□□ 1.68
UBXN4-202ENST00000415164 KLRG2A4D1S0 409 aaPredicted RBP25.56■■□□□ 1.68
UBXN4-202ENST00000415164 GPTP24298 496 aa25.56■■□□□ 1.68
UBXN4-202ENST00000415164 NYXQ9GZU5 481 aa25.56■■□□□ 1.68
UBXN4-202ENST00000415164 CREBZFQ9NS37 354 aa25.56■■□□□ 1.68
UBXN4-202ENST00000415164 LDHDQ86WU2 507 aa25.55■■□□□ 1.68
UBXN4-202ENST00000415164 SYNE4Q8N205 404 aa25.55■■□□□ 1.68
UBXN4-202ENST00000415164 ZBTB3Q9H5J0 574 aa25.55■■□□□ 1.68
UBXN4-202ENST00000415164 TAF1DQ9H5J8 278 aaPredicted RBP25.55■■□□□ 1.68
UBXN4-202ENST00000415164 MAPK8IP3Q9UPT6 1336 aa25.55■■□□□ 1.68
UBXN4-202ENST00000415164 RGL2O15211 777 aa25.54■■□□□ 1.68
UBXN4-202ENST00000415164 IARSP41252 1262 aaKnown RBP25.54■■□□□ 1.68
UBXN4-202ENST00000415164 TTLL7Q6ZT98 887 aa25.54■■□□□ 1.68
UBXN4-202ENST00000415164 RPGRQ92834 1020 aaKnown RBP25.54■■□□□ 1.68
UBXN4-202ENST00000415164 ABCC12Q96J65 1359 aa25.54■■□□□ 1.68
UBXN4-202ENST00000415164 EIF4A1P60842 406 aaKnown RBP25.53■■□□□ 1.68
UBXN4-202ENST00000415164 NFE2L2Q16236 605 aa25.53■■□□□ 1.68
UBXN4-202ENST00000415164 L3MBTL3Q96JM7 780 aaPredicted RBP25.53■■□□□ 1.68
UBXN4-202ENST00000415164 HACL1Q9UJ83 578 aa25.53■■□□□ 1.68
UBXN4-202ENST00000415164 MAP3K15Q6ZN16 1313 aa25.53■■□□□ 1.68
UBXN4-202ENST00000415164 TCERG1O14776 1098 aaKnown RBP25.52■■□□□ 1.68
UBXN4-202ENST00000415164 LAMB4A4D0S4 1761 aa25.51■■□□□ 1.67
UBXN4-202ENST00000415164 ERVV-1B6SEH8 477 aa25.51■■□□□ 1.67
UBXN4-202ENST00000415164 RNF123Q5XPI4 1314 aa25.51■■□□□ 1.67
UBXN4-202ENST00000415164 JDP2Q8WYK2 163 aa25.5■■□□□ 1.67
UBXN4-202ENST00000415164 EPHX2P34913 555 aa25.49■■□□□ 1.67
UBXN4-202ENST00000415164 PLEKHF1Q96S99 279 aa25.49■■□□□ 1.67
UBXN4-202ENST00000415164 GJA3Q9Y6H8 435 aa25.49■■□□□ 1.67
UBXN4-202ENST00000415164 PNNQ9H307 717 aaKnown RBP25.48■■□□□ 1.67
UBXN4-202ENST00000415164 TSPYL4Q9UJ04 414 aa25.48■■□□□ 1.67
UBXN4-202ENST00000415164 UBN2Q6ZU65 1347 aa25.47■■□□□ 1.67
UBXN4-202ENST00000415164 SUSD4Q5VX71 490 aa25.47■■□□□ 1.67
UBXN4-202ENST00000415164 PASKQ96RG2 1323 aa25.46■■□□□ 1.67
UBXN4-202ENST00000415164 EIF2S2P20042 333 aaKnown RBP25.46■■□□□ 1.67
UBXN4-202ENST00000415164 CRY2Q49AN0 593 aa25.46■■□□□ 1.67
UBXN4-202ENST00000415164 KDM3BQ7LBC6 1761 aa25.46■■□□□ 1.67
UBXN4-202ENST00000415164 CNTNAP1P78357 1384 aa25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms