RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 COG6Q9Y2V7 657 aa18.06■□□□□ 0.48
SF3B1-204ENST00000414963 MYH14Q7Z406 1995 aaKnown RBP18.06■□□□□ 0.48
SF3B1-204ENST00000414963 ATP10DQ9P241 1426 aa18.06■□□□□ 0.48
SF3B1-204ENST00000414963 ERVV-1B6SEH8 477 aa18.05■□□□□ 0.48
SF3B1-204ENST00000414963 RGL2O15211 777 aa18.05■□□□□ 0.48
SF3B1-204ENST00000414963 BEND3Q5T5X7 828 aa18.05■□□□□ 0.48
SF3B1-204ENST00000414963 KIF6Q6ZMV9 814 aa18.05■□□□□ 0.48
SF3B1-204ENST00000414963 METTL22Q9BUU2 404 aaPredicted RBP18.05■□□□□ 0.48
SF3B1-204ENST00000414963 DDX19BQ9UMR2 479 aa18.05■□□□□ 0.48
SF3B1-204ENST00000414963 TAF1LQ8IZX4 1826 aa18.05■□□□□ 0.48
SF3B1-204ENST00000414963 MAP3K15Q6ZN16 1313 aa18.04■□□□□ 0.48
SF3B1-204ENST00000414963 C4BP0C0L5 1744 aa18.04■□□□□ 0.48
SF3B1-204ENST00000414963 BAG6P46379 1132 aa18.04■□□□□ 0.48
SF3B1-204ENST00000414963 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
SF3B1-204ENST00000414963 EXOC6Q8TAG9 804 aa18.04■□□□□ 0.48
SF3B1-204ENST00000414963 CHMP4BQ9H444 224 aaKnown RBP18.04■□□□□ 0.48
SF3B1-204ENST00000414963 RTCBQ9Y3I0 505 aaKnown RBP18.04■□□□□ 0.48
SF3B1-204ENST00000414963 ZBTB7BO15156 539 aaPredicted RBP18.03■□□□□ 0.48
SF3B1-204ENST00000414963 GNPATO15228 680 aa18.03■□□□□ 0.48
SF3B1-204ENST00000414963 ALDH1L1O75891 902 aa18.03■□□□□ 0.48
SF3B1-204ENST00000414963 ADRA2BP18089 450 aa18.03■□□□□ 0.48
SF3B1-204ENST00000414963 SLC4A10Q6U841 1118 aa18.03■□□□□ 0.48
SF3B1-204ENST00000414963 DZIP3Q86Y13 1208 aaKnown RBP18.03■□□□□ 0.48
SF3B1-204ENST00000414963 ITPRIPQ8IWB1 547 aa18.03■□□□□ 0.48
SF3B1-204ENST00000414963 LINS1Q8NG48 757 aa18.03■□□□□ 0.48
SF3B1-204ENST00000414963 COL15A1P39059 1388 aa18.03■□□□□ 0.48
SF3B1-204ENST00000414963 EN1Q05925 392 aaPredicted RBP18.02■□□□□ 0.48
SF3B1-204ENST00000414963 AKT1S1Q96B36 256 aa18.02■□□□□ 0.48
SF3B1-204ENST00000414963 AK7Q96M32 723 aa18.02■□□□□ 0.48
SF3B1-204ENST00000414963 SRCIN1Q9C0H9 1055 aa18.02■□□□□ 0.48
SF3B1-204ENST00000414963 ZNF330Q9Y3S2 320 aaPredicted RBP18.02■□□□□ 0.48
SF3B1-204ENST00000414963 GTF3C3Q9Y5Q9 886 aa18.02■□□□□ 0.48
SF3B1-204ENST00000414963 NEXNQ0ZGT2 675 aa18.01■□□□□ 0.47
SF3B1-204ENST00000414963 TRIM28Q13263 835 aaKnown RBP18.01■□□□□ 0.47
SF3B1-204ENST00000414963 EZH2Q15910 746 aaKnown RBP18.01■□□□□ 0.47
SF3B1-204ENST00000414963 GIGYF2Q6Y7W6 1299 aaKnown RBP18.01■□□□□ 0.47
SF3B1-204ENST00000414963 TBC1D2BQ9UPU7 963 aa18.01■□□□□ 0.47
SF3B1-204ENST00000414963 CAMTA2O94983 1202 aa18■□□□□ 0.47
SF3B1-204ENST00000414963 IGKV5-2P06315 115 aa18■□□□□ 0.47
SF3B1-204ENST00000414963 SSFA2P28290 1259 aa18■□□□□ 0.47
SF3B1-204ENST00000414963 TCIRG1Q13488 830 aa18■□□□□ 0.47
SF3B1-204ENST00000414963 HSP90AB3PQ58FF7 597 aa18■□□□□ 0.47
SF3B1-204ENST00000414963 ZBTB3Q9H5J0 574 aa18■□□□□ 0.47
SF3B1-204ENST00000414963 ZBTB40Q9NUA8 1239 aa18■□□□□ 0.47
SF3B1-204ENST00000414963 TRAPPC3LQ5T215 181 aa17.99■□□□□ 0.47
SF3B1-204ENST00000414963 CLEC4GQ6UXB4 293 aa17.99■□□□□ 0.47
SF3B1-204ENST00000414963 AMIGO3Q86WK7 504 aa17.99■□□□□ 0.47
SF3B1-204ENST00000414963 ISCA1Q9BUE6 129 aa17.99■□□□□ 0.47
SF3B1-204ENST00000414963 NARFQ9UHQ1 456 aa17.99■□□□□ 0.47
SF3B1-204ENST00000414963 NEURL1BA8MQ27 555 aa17.98■□□□□ 0.47
SF3B1-204ENST00000414963 HLFQ16534 295 aa17.98■□□□□ 0.47
SF3B1-204ENST00000414963 DEFB132Q7Z7B7 95 aa17.98■□□□□ 0.47
SF3B1-204ENST00000414963 ARHGEF1Q92888 912 aaKnown RBP17.98■□□□□ 0.47
SF3B1-204ENST00000414963 MYD88Q99836 296 aa17.98■□□□□ 0.47
SF3B1-204ENST00000414963 USP44Q9H0E7 712 aa17.98■□□□□ 0.47
SF3B1-204ENST00000414963 N4BP2Q86UW6 1770 aaPredicted RBP17.98■□□□□ 0.47
SF3B1-204ENST00000414963 NUP188Q5SRE5 1749 aa17.98■□□□□ 0.47
SF3B1-204ENST00000414963 CCDC191Q8NCU4 936 aa17.97■□□□□ 0.47
SF3B1-204ENST00000414963 UPF1Q92900 1129 aaKnown RBP eCLIP17.97■□□□□ 0.47
SF3B1-204ENST00000414963 ARXQ96QS3 562 aa17.97■□□□□ 0.47
SF3B1-204ENST00000414963 UTYO14607 1347 aa17.97■□□□□ 0.47
SF3B1-204ENST00000414963 ARFGEF2Q9Y6D5 1785 aa17.96■□□□□ 0.47
SF3B1-204ENST00000414963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.96■□□□□ 0.47
SF3B1-204ENST00000414963 GNAI3P08754 354 aa17.96■□□□□ 0.47
SF3B1-204ENST00000414963 GCKRQ14397 625 aa17.96■□□□□ 0.47
SF3B1-204ENST00000414963 ZNF827Q17R98 1081 aa17.96■□□□□ 0.47
SF3B1-204ENST00000414963 CWF19L2Q2TBE0 894 aaKnown RBP17.96■□□□□ 0.47
SF3B1-204ENST00000414963 ZNF34Q8IZ26 560 aa17.96■□□□□ 0.47
SF3B1-204ENST00000414963 FLAD1Q8NFF5 587 aa17.96■□□□□ 0.47
SF3B1-204ENST00000414963 ZNF652Q9Y2D9 606 aa17.96■□□□□ 0.47
SF3B1-204ENST00000414963 RFC4P35249 363 aa17.95■□□□□ 0.46
SF3B1-204ENST00000414963 SMIM5Q71RC9 77 aa17.95■□□□□ 0.46
SF3B1-204ENST00000414963 MEIS3Q99687 375 aa17.95■□□□□ 0.46
SF3B1-204ENST00000414963 PPP4R2Q9NY27 417 aa17.95■□□□□ 0.46
SF3B1-204ENST00000414963 USP42Q9H9J4 1324 aaKnown RBP17.95■□□□□ 0.46
SF3B1-204ENST00000414963 ATP5J2-PTCD1G3V325 749 aa17.94■□□□□ 0.46
SF3B1-204ENST00000414963 ZPR1O75312 459 aa17.94■□□□□ 0.46
SF3B1-204ENST00000414963 BCL2L12Q9HB09 334 aa17.94■□□□□ 0.46
SF3B1-204ENST00000414963 CWC25Q9NXE8 425 aaPredicted RBP17.94■□□□□ 0.46
SF3B1-204ENST00000414963 TFCP2L1Q9NZI6 479 aa17.94■□□□□ 0.46
SF3B1-204ENST00000414963 UBR3Q6ZT12 1888 aa17.94■□□□□ 0.46
SF3B1-204ENST00000414963 GRM8O00222 908 aa17.93■□□□□ 0.46
SF3B1-204ENST00000414963 HDAC5Q9UQL6 1122 aa17.93■□□□□ 0.46
SF3B1-204ENST00000414963 H7C1W4 665 aa17.92■□□□□ 0.46
SF3B1-204ENST00000414963 PHF14O94880 888 aa17.92■□□□□ 0.46
SF3B1-204ENST00000414963 SLC15A2Q16348 729 aa17.92■□□□□ 0.46
SF3B1-204ENST00000414963 PARP10Q53GL7 1025 aa17.92■□□□□ 0.46
SF3B1-204ENST00000414963 USPL1Q5W0Q7 1092 aa17.92■□□□□ 0.46
SF3B1-204ENST00000414963 NLRP10Q86W26 655 aa17.92■□□□□ 0.46
SF3B1-204ENST00000414963 STK32BQ9NY57 414 aa17.92■□□□□ 0.46
SF3B1-204ENST00000414963 C9orf78Q9NZ63 289 aaPredicted RBP17.92■□□□□ 0.46
SF3B1-204ENST00000414963 SRP68Q9UHB9 627 aaKnown RBP17.92■□□□□ 0.46
SF3B1-204ENST00000414963 GNAI2P04899 355 aa17.91■□□□□ 0.46
SF3B1-204ENST00000414963 NBPF7P0C2Y1 421 aaPredicted RBP17.91■□□□□ 0.46
SF3B1-204ENST00000414963 UBTFL1P0CB47 393 aaPredicted RBP17.91■□□□□ 0.46
SF3B1-204ENST00000414963 ANO8Q9HCE9 1232 aaPredicted RBP17.91■□□□□ 0.46
SF3B1-204ENST00000414963 BCORQ6W2J9 1755 aa17.91■□□□□ 0.46
SF3B1-204ENST00000414963 SCN7AQ01118 1682 aa17.9■□□□□ 0.46
SF3B1-204ENST00000414963 CASP7P55210 303 aa17.9■□□□□ 0.46
SF3B1-204ENST00000414963 COL23A1Q86Y22 540 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms