RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 IRX2Q9BZI1 471 aaPredicted RBP12.21□□□□□ -0.45
TRA2B-204ENST00000414862 ZFAND3Q9H8U3 227 aa12.21□□□□□ -0.45
TRA2B-204ENST00000414862 MKRN1Q9UHC7 482 aaKnown RBP12.21□□□□□ -0.45
TRA2B-204ENST00000414862 EID1Q9Y6B2 187 aa12.21□□□□□ -0.45
TRA2B-204ENST00000414862 DGAT1O75907 488 aa12.2□□□□□ -0.46
TRA2B-204ENST00000414862 PKDCCQ504Y2 493 aa12.2□□□□□ -0.46
TRA2B-204ENST00000414862 POTEAQ6S8J7 498 aa12.2□□□□□ -0.46
TRA2B-204ENST00000414862 VRTNQ9H8Y1 702 aa12.2□□□□□ -0.46
TRA2B-204ENST00000414862 NOD1Q9Y239 953 aa12.2□□□□□ -0.46
TRA2B-204ENST00000414862 SLIT1O75093 1534 aa12.2□□□□□ -0.46
TRA2B-204ENST00000414862 LRRC9Q6ZRR7 1453 aa12.2□□□□□ -0.46
TRA2B-204ENST00000414862 ARHGAP23Q9P227 1491 aa12.2□□□□□ -0.46
TRA2B-204ENST00000414862 EIF2AK4Q9P2K8 1649 aaKnown RBP12.19□□□□□ -0.46
TRA2B-204ENST00000414862 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.19□□□□□ -0.46
TRA2B-204ENST00000414862 TXNDC2Q86VQ3 553 aa12.19□□□□□ -0.46
TRA2B-204ENST00000414862 UBR1Q8IWV7 1749 aa12.19□□□□□ -0.46
TRA2B-204ENST00000414862 AVPP01185 164 aa12.18□□□□□ -0.46
TRA2B-204ENST00000414862 ADD1P35611 737 aaKnown RBP12.18□□□□□ -0.46
TRA2B-204ENST00000414862 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
TRA2B-204ENST00000414862 KANK4Q5T7N3 995 aaPredicted RBP12.18□□□□□ -0.46
TRA2B-204ENST00000414862 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
TRA2B-204ENST00000414862 CAPN5O15484 640 aaPredicted RBP12.17□□□□□ -0.46
TRA2B-204ENST00000414862 LTKP29376 864 aa12.17□□□□□ -0.46
TRA2B-204ENST00000414862 CBLBQ13191 982 aa12.17□□□□□ -0.46
TRA2B-204ENST00000414862 PBXIP1Q96AQ6 731 aa12.17□□□□□ -0.46
TRA2B-204ENST00000414862 MROH1Q8NDA8 1641 aa12.16□□□□□ -0.46
TRA2B-204ENST00000414862 ATP5J2-PTCD1G3V325 749 aa12.16□□□□□ -0.46
TRA2B-204ENST00000414862 SRPK2P78362 688 aaKnown RBP12.16□□□□□ -0.46
TRA2B-204ENST00000414862 TRIM50Q86XT4 487 aa12.16□□□□□ -0.46
TRA2B-204ENST00000414862 OSBPL3Q9H4L5 887 aa12.16□□□□□ -0.46
TRA2B-204ENST00000414862 MAST1Q9Y2H9 1570 aa12.16□□□□□ -0.46
TRA2B-204ENST00000414862 Q6ZVU0 165 aa12.15□□□□□ -0.46
TRA2B-204ENST00000414862 ROBO1Q9Y6N7 1651 aa12.15□□□□□ -0.46
TRA2B-204ENST00000414862 TMEM2Q9UHN6 1383 aa12.15□□□□□ -0.46
TRA2B-204ENST00000414862 ARHGAP31Q2M1Z3 1444 aa12.14□□□□□ -0.47
TRA2B-204ENST00000414862 SRCAPQ6ZRS2 3230 aa12.14□□□□□ -0.47
TRA2B-204ENST00000414862 RASA1P20936 1047 aa12.14□□□□□ -0.47
TRA2B-204ENST00000414862 GTF2IP78347 998 aa12.14□□□□□ -0.47
TRA2B-204ENST00000414862 NKTRP30414 1462 aaKnown RBP12.14□□□□□ -0.47
TRA2B-204ENST00000414862 PRDM15P57071 1507 aaPredicted RBP12.13□□□□□ -0.47
TRA2B-204ENST00000414862 MAP3K1Q13233 1512 aa12.13□□□□□ -0.47
TRA2B-204ENST00000414862 DUOX2Q9NRD8 1548 aa12.13□□□□□ -0.47
TRA2B-204ENST00000414862 PPP1R15AO75807 674 aaPredicted RBP12.13□□□□□ -0.47
TRA2B-204ENST00000414862 ATP1A2P50993 1020 aa12.13□□□□□ -0.47
TRA2B-204ENST00000414862 OGFOD1Q8N543 542 aa12.13□□□□□ -0.47
TRA2B-204ENST00000414862 PCDHGA11Q9Y5H2 935 aa12.13□□□□□ -0.47
TRA2B-204ENST00000414862 SETD1AO15047 1707 aaKnown RBP12.13□□□□□ -0.47
TRA2B-204ENST00000414862 CEP152O94986 1710 aa12.13□□□□□ -0.47
TRA2B-204ENST00000414862 MSH6P52701 1360 aa12.13□□□□□ -0.47
TRA2B-204ENST00000414862 JCADQ9P266 1359 aa12.13□□□□□ -0.47
TRA2B-204ENST00000414862 XIRP1Q702N8 1843 aaKnown RBP12.12□□□□□ -0.47
TRA2B-204ENST00000414862 ADH1AP07327 375 aa12.12□□□□□ -0.47
TRA2B-204ENST00000414862 KCNA6P17658 529 aa12.12□□□□□ -0.47
TRA2B-204ENST00000414862 CLDN10P78369 228 aa12.12□□□□□ -0.47
TRA2B-204ENST00000414862 CTC1Q2NKJ3 1217 aa12.12□□□□□ -0.47
TRA2B-204ENST00000414862 LARP1Q6PKG0 1096 aaKnown RBP12.12□□□□□ -0.47
TRA2B-204ENST00000414862 CYP2U1Q7Z449 544 aa12.12□□□□□ -0.47
TRA2B-204ENST00000414862 DNAAF2Q9NVR5 837 aaKnown RBP12.12□□□□□ -0.47
TRA2B-204ENST00000414862 EFCAB6Q5THR3 1501 aa12.11□□□□□ -0.47
TRA2B-204ENST00000414862 SMCPP49901 116 aaPredicted RBP12.11□□□□□ -0.47
TRA2B-204ENST00000414862 PSME1Q06323 249 aa12.11□□□□□ -0.47
TRA2B-204ENST00000414862 MEIOBQ8N635 442 aa12.11□□□□□ -0.47
TRA2B-204ENST00000414862 ERBINQ96RT1 1412 aa12.11□□□□□ -0.47
TRA2B-204ENST00000414862 KANK1Q14678 1352 aa12.1□□□□□ -0.47
TRA2B-204ENST00000414862 KIF15Q9NS87 1388 aa12.1□□□□□ -0.47
TRA2B-204ENST00000414862 AXIN1O15169 862 aa12.1□□□□□ -0.47
TRA2B-204ENST00000414862 CRTC2Q53ET0 693 aaPredicted RBP12.1□□□□□ -0.47
TRA2B-204ENST00000414862 AGBL1Q96MI9 1066 aa12.1□□□□□ -0.47
TRA2B-204ENST00000414862 PIK3C2BO00750 1634 aa12.1□□□□□ -0.47
TRA2B-204ENST00000414862 FAM196BA6NMK8 535 aa12.09□□□□□ -0.47
TRA2B-204ENST00000414862 ZBTB7BO15156 539 aaPredicted RBP12.09□□□□□ -0.47
TRA2B-204ENST00000414862 MEX3CQ5U5Q3 659 aaKnown RBP12.09□□□□□ -0.47
TRA2B-204ENST00000414862 LARGE2Q8N3Y3 721 aa12.09□□□□□ -0.47
TRA2B-204ENST00000414862 ZNF594Q96JF6 807 aaPredicted RBP12.09□□□□□ -0.47
TRA2B-204ENST00000414862 MYOM3Q5VTT5 1437 aa12.09□□□□□ -0.47
TRA2B-204ENST00000414862 NWD1Q149M9 1564 aa12.09□□□□□ -0.47
TRA2B-204ENST00000414862 ACIN1Q9UKV3 1341 aaKnown RBP12.09□□□□□ -0.47
TRA2B-204ENST00000414862 USP17L15C9J2P7 530 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 USP17L10C9JJH3 530 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 USP17L13C9JLJ4 530 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 USP17L12C9JPN9 530 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 USP17L11C9JVI0 530 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 USP17L21D6R901 530 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 USP17L18D6R9N7 530 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 USP17L22D6RA61 530 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 USP17L17D6RBQ6 530 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 USP17L19D6RCP7 530 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 USP17L20D6RJB6 530 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 RELBQ01201 579 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 USP17L24Q0WX57 530 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 PTK7Q13308 1070 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 CRIPAKQ8N1N5 446 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 KDF1Q8NAX2 398 aaPredicted RBP12.08□□□□□ -0.48
TRA2B-204ENST00000414862 SLC26A8Q96RN1 970 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 KIAA1024Q9UPX6 916 aa12.08□□□□□ -0.48
TRA2B-204ENST00000414862 KDM5AP29375 1690 aaKnown RBP12.07□□□□□ -0.48
TRA2B-204ENST00000414862 PHLPP1O60346 1717 aa12.07□□□□□ -0.48
TRA2B-204ENST00000414862 ATG7O95352 703 aa12.07□□□□□ -0.48
TRA2B-204ENST00000414862 GNRH1P01148 92 aa12.07□□□□□ -0.48
TRA2B-204ENST00000414862 PTGIRP43119 386 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms