RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 CCT4P50991 539 aaKnown RBP12.25□□□□□ -0.45
RIF1-202ENST00000414861 BEND3Q5T5X7 828 aa12.25□□□□□ -0.45
RIF1-202ENST00000414861 B4GALNT3Q6L9W6 998 aa12.25□□□□□ -0.45
RIF1-202ENST00000414861 RIC3Q7Z5B4 369 aa12.25□□□□□ -0.45
RIF1-202ENST00000414861 ZBTB3Q9H5J0 574 aa12.25□□□□□ -0.45
RIF1-202ENST00000414861 NUP98P52948 1817 aa12.25□□□□□ -0.45
RIF1-202ENST00000414861 EIF5P55010 431 aaKnown RBP12.25□□□□□ -0.45
RIF1-202ENST00000414861 SMIM5Q71RC9 77 aa12.25□□□□□ -0.45
RIF1-202ENST00000414861 AMIGO3Q86WK7 504 aa12.25□□□□□ -0.45
RIF1-202ENST00000414861 PROM2Q8N271 834 aa12.25□□□□□ -0.45
RIF1-202ENST00000414861 PLBD2Q8NHP8 589 aa12.25□□□□□ -0.45
RIF1-202ENST00000414861 MEIS3Q99687 375 aa12.25□□□□□ -0.45
RIF1-202ENST00000414861 ZBTB40Q9NUA8 1239 aa12.25□□□□□ -0.45
RIF1-202ENST00000414861 UBR3Q6ZT12 1888 aa12.24□□□□□ -0.45
RIF1-202ENST00000414861 BCORQ6W2J9 1755 aa12.24□□□□□ -0.45
RIF1-202ENST00000414861 CWF19L2Q2TBE0 894 aaKnown RBP12.24□□□□□ -0.45
RIF1-202ENST00000414861 C1orf115Q9H7X2 142 aa12.24□□□□□ -0.45
RIF1-202ENST00000414861 COL15A1P39059 1388 aa12.23□□□□□ -0.45
RIF1-202ENST00000414861 C4AP0C0L4 1744 aa12.23□□□□□ -0.45
RIF1-202ENST00000414861 ANKRD36CQ5JPF3 1778 aa12.23□□□□□ -0.45
RIF1-202ENST00000414861 IGKV5-2P06315 115 aa12.23□□□□□ -0.45
RIF1-202ENST00000414861 TXNRD1Q16881 649 aa12.23□□□□□ -0.45
RIF1-202ENST00000414861 METTL22Q9BUU2 404 aaPredicted RBP12.23□□□□□ -0.45
RIF1-202ENST00000414861 SRCIN1Q9C0H9 1055 aa12.23□□□□□ -0.45
RIF1-202ENST00000414861 PLSCR1O15162 318 aa12.22□□□□□ -0.45
RIF1-202ENST00000414861 SLC27A3Q5K4L6 730 aa12.22□□□□□ -0.45
RIF1-202ENST00000414861 ARXQ96QS3 562 aa12.22□□□□□ -0.45
RIF1-202ENST00000414861 MYD88Q99836 296 aa12.22□□□□□ -0.45
RIF1-202ENST00000414861 TBC1D2BQ9UPU7 963 aa12.22□□□□□ -0.45
RIF1-202ENST00000414861 PCDHB15Q9Y5E8 787 aa12.22□□□□□ -0.45
RIF1-202ENST00000414861 MAP3K15Q6ZN16 1313 aa12.22□□□□□ -0.45
RIF1-202ENST00000414861 KIF6Q6ZMV9 814 aa12.22□□□□□ -0.45
RIF1-202ENST00000414861 SCN7AQ01118 1682 aa12.22□□□□□ -0.45
RIF1-202ENST00000414861 TUBGCP6Q96RT7 1819 aa12.22□□□□□ -0.45
RIF1-202ENST00000414861 GNPATO15228 680 aa12.21□□□□□ -0.45
RIF1-202ENST00000414861 RC3H1Q5TC82 1133 aaKnown RBP12.21□□□□□ -0.45
RIF1-202ENST00000414861 DZIP3Q86Y13 1208 aaKnown RBP12.21□□□□□ -0.45
RIF1-202ENST00000414861 LINS1Q8NG48 757 aa12.21□□□□□ -0.45
RIF1-202ENST00000414861 USP44Q9H0E7 712 aa12.21□□□□□ -0.45
RIF1-202ENST00000414861 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.45
RIF1-202ENST00000414861 HLFQ16534 295 aa12.21□□□□□ -0.45
RIF1-202ENST00000414861 CCDC136Q96JN2 1154 aa12.21□□□□□ -0.45
RIF1-202ENST00000414861 NEURL1BA8MQ27 555 aa12.2□□□□□ -0.46
RIF1-202ENST00000414861 ALDH1L1O75891 902 aa12.2□□□□□ -0.46
RIF1-202ENST00000414861 RPS6KA4O75676 772 aa12.19□□□□□ -0.46
RIF1-202ENST00000414861 NBPF7P0C2Y1 421 aaPredicted RBP12.19□□□□□ -0.46
RIF1-202ENST00000414861 NEXNQ0ZGT2 675 aa12.19□□□□□ -0.46
RIF1-202ENST00000414861 AAMPQ13685 434 aa12.19□□□□□ -0.46
RIF1-202ENST00000414861 CAMTA2O94983 1202 aa12.19□□□□□ -0.46
RIF1-202ENST00000414861 GIGYF2Q6Y7W6 1299 aaKnown RBP12.19□□□□□ -0.46
RIF1-202ENST00000414861 NPM2Q86SE8 214 aaKnown RBP12.19□□□□□ -0.46
RIF1-202ENST00000414861 AK7Q96M32 723 aa12.19□□□□□ -0.46
RIF1-202ENST00000414861 EN1Q05925 392 aaPredicted RBP12.18□□□□□ -0.46
RIF1-202ENST00000414861 GCKRQ14397 625 aa12.18□□□□□ -0.46
RIF1-202ENST00000414861 PHF14O94880 888 aa12.18□□□□□ -0.46
RIF1-202ENST00000414861 TCIRG1Q13488 830 aa12.18□□□□□ -0.46
RIF1-202ENST00000414861 EZH2Q15910 746 aaKnown RBP12.18□□□□□ -0.46
RIF1-202ENST00000414861 ZNF827Q17R98 1081 aa12.18□□□□□ -0.46
RIF1-202ENST00000414861 RTCBQ9Y3I0 505 aaKnown RBP12.18□□□□□ -0.46
RIF1-202ENST00000414861 ERVV-1B6SEH8 477 aa12.17□□□□□ -0.46
RIF1-202ENST00000414861 IGHDP01880 384 aa12.17□□□□□ -0.46
RIF1-202ENST00000414861 CAMKK2Q96RR4 588 aa12.17□□□□□ -0.46
RIF1-202ENST00000414861 ISCA1Q9BUE6 129 aa12.17□□□□□ -0.46
RIF1-202ENST00000414861 CHMP4BQ9H444 224 aaKnown RBP12.17□□□□□ -0.46
RIF1-202ENST00000414861 GRM8O00222 908 aa12.17□□□□□ -0.46
RIF1-202ENST00000414861 GNAI3P08754 354 aa12.17□□□□□ -0.46
RIF1-202ENST00000414861 UBTFL1P0CB47 393 aaPredicted RBP12.17□□□□□ -0.46
RIF1-202ENST00000414861 GPTP24298 496 aa12.17□□□□□ -0.46
RIF1-202ENST00000414861 DEFB132Q7Z7B7 95 aa12.17□□□□□ -0.46
RIF1-202ENST00000414861 SIRT2Q8IXJ6 389 aa12.17□□□□□ -0.46
RIF1-202ENST00000414861 JARID2Q92833 1246 aaPredicted RBP12.17□□□□□ -0.46
RIF1-202ENST00000414861 SRP68Q9UHB9 627 aaKnown RBP12.17□□□□□ -0.46
RIF1-202ENST00000414861 LRRFIP2Q9Y608 721 aaKnown RBP12.17□□□□□ -0.46
RIF1-202ENST00000414861 IBTKQ9P2D0 1353 aaPredicted RBP12.17□□□□□ -0.46
RIF1-202ENST00000414861 KDM2BQ8NHM5 1336 aa12.17□□□□□ -0.46
RIF1-202ENST00000414861 ARHGEF1Q92888 912 aaKnown RBP12.16□□□□□ -0.46
RIF1-202ENST00000414861 C9orf78Q9NZ63 289 aaPredicted RBP12.16□□□□□ -0.46
RIF1-202ENST00000414861 UTYO14607 1347 aa12.16□□□□□ -0.46
RIF1-202ENST00000414861 UBN2Q6ZU65 1347 aa12.16□□□□□ -0.46
RIF1-202ENST00000414861 GNAI2P04899 355 aa12.16□□□□□ -0.46
RIF1-202ENST00000414861 CEP85Q6P2H3 762 aa12.16□□□□□ -0.46
RIF1-202ENST00000414861 BCL2L12Q9HB09 334 aa12.16□□□□□ -0.46
RIF1-202ENST00000414861 A0A087WZG4 1122 aa12.15□□□□□ -0.46
RIF1-202ENST00000414861 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.15□□□□□ -0.46
RIF1-202ENST00000414861 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
RIF1-202ENST00000414861 CWC25Q9NXE8 425 aaPredicted RBP12.15□□□□□ -0.46
RIF1-202ENST00000414861 RTL5Q5HYW3 569 aaPredicted RBP12.15□□□□□ -0.46
RIF1-202ENST00000414861 USPL1Q5W0Q7 1092 aa12.15□□□□□ -0.46
RIF1-202ENST00000414861 UBE3BQ7Z3V4 1068 aa12.15□□□□□ -0.46
RIF1-202ENST00000414861 CCDC191Q8NCU4 936 aa12.15□□□□□ -0.46
RIF1-202ENST00000414861 KAZALD1Q96I82 304 aa12.15□□□□□ -0.46
RIF1-202ENST00000414861 ANO8Q9HCE9 1232 aaPredicted RBP12.15□□□□□ -0.46
RIF1-202ENST00000414861 NARFQ9UHQ1 456 aa12.15□□□□□ -0.46
RIF1-202ENST00000414861 CASP7P55210 303 aa12.14□□□□□ -0.47
RIF1-202ENST00000414861 TRIM28Q13263 835 aaKnown RBP12.14□□□□□ -0.47
RIF1-202ENST00000414861 HSP90AB3PQ58FF7 597 aa12.14□□□□□ -0.47
RIF1-202ENST00000414861 NLRP10Q86W26 655 aa12.14□□□□□ -0.47
RIF1-202ENST00000414861 ZNF34Q8IZ26 560 aa12.14□□□□□ -0.47
RIF1-202ENST00000414861 SUCLG2Q96I99 432 aa12.14□□□□□ -0.47
RIF1-202ENST00000414861 USP42Q9H9J4 1324 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms