RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 LYPD8Q6UX82 237 aa6.84□□□□□ -1.31
VPS41-205ENST00000414632 CABP1Q9NZU7 370 aa6.84□□□□□ -1.31
VPS41-205ENST00000414632 MYOM1P52179 1685 aa6.84□□□□□ -1.32
VPS41-205ENST00000414632 SBNO1A3KN83 1393 aa6.83□□□□□ -1.32
VPS41-205ENST00000414632 AFF2P51816 1311 aa6.83□□□□□ -1.32
VPS41-205ENST00000414632 CARNS1A5YM72 827 aa6.83□□□□□ -1.32
VPS41-205ENST00000414632 PATL2C9JE40 543 aaKnown RBP6.83□□□□□ -1.32
VPS41-205ENST00000414632 BRD1O95696 1058 aa6.83□□□□□ -1.32
VPS41-205ENST00000414632 EIF4G2P78344 907 aaKnown RBP eCLIP6.83□□□□□ -1.32
VPS41-205ENST00000414632 MMRN1Q13201 1228 aa6.83□□□□□ -1.32
VPS41-205ENST00000414632 ZNF687Q8N1G0 1237 aa6.83□□□□□ -1.32
VPS41-205ENST00000414632 NRAPQ86VF7 1730 aa6.83□□□□□ -1.32
VPS41-205ENST00000414632 POLR3AO14802 1390 aaPredicted RBP6.82□□□□□ -1.32
VPS41-205ENST00000414632 RGPD5Q99666 1765 aa6.82□□□□□ -1.32
VPS41-205ENST00000414632 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.82□□□□□ -1.32
VPS41-205ENST00000414632 POTEB3A0JP26 581 aa6.82□□□□□ -1.32
VPS41-205ENST00000414632 POTEBQ6S5H4 581 aa6.82□□□□□ -1.32
VPS41-205ENST00000414632 TBC1D9Q6ZT07 1266 aa6.82□□□□□ -1.32
VPS41-205ENST00000414632 MRPL50Q8N5N7 158 aaKnown RBP6.82□□□□□ -1.32
VPS41-205ENST00000414632 TMC1Q8TDI8 760 aa6.82□□□□□ -1.32
VPS41-205ENST00000414632 LRCH3Q96II8 777 aa6.82□□□□□ -1.32
VPS41-205ENST00000414632 NGLY1Q96IV0 654 aa6.82□□□□□ -1.32
VPS41-205ENST00000414632 MAFBQ9Y5Q3 323 aaPredicted RBP6.82□□□□□ -1.32
VPS41-205ENST00000414632 ARHGEF10O15013 1369 aa6.82□□□□□ -1.32
VPS41-205ENST00000414632 SBNO2Q9Y2G9 1366 aa6.82□□□□□ -1.32
VPS41-205ENST00000414632 NWD2Q9ULI1 1742 aa6.81□□□□□ -1.32
VPS41-205ENST00000414632 KIF20BQ96Q89 1820 aa6.81□□□□□ -1.32
VPS41-205ENST00000414632 ATG7O95352 703 aa6.81□□□□□ -1.32
VPS41-205ENST00000414632 MFAP1P55081 439 aaKnown RBP6.81□□□□□ -1.32
VPS41-205ENST00000414632 KCNA1Q09470 495 aa6.81□□□□□ -1.32
VPS41-205ENST00000414632 NR1H3Q13133 447 aa6.81□□□□□ -1.32
VPS41-205ENST00000414632 RGS22Q8NE09 1264 aa6.81□□□□□ -1.32
VPS41-205ENST00000414632 TESK2Q96S53 571 aa6.81□□□□□ -1.32
VPS41-205ENST00000414632 USB1Q9BQ65 265 aaKnown RBP6.81□□□□□ -1.32
VPS41-205ENST00000414632 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.81□□□□□ -1.32
VPS41-205ENST00000414632 LTN1O94822 1766 aa6.81□□□□□ -1.32
VPS41-205ENST00000414632 COL14A1Q05707 1796 aaKnown RBP6.81□□□□□ -1.32
VPS41-205ENST00000414632 USP6P35125 1406 aa6.81□□□□□ -1.32
VPS41-205ENST00000414632 ATAD2Q6PL18 1390 aa6.81□□□□□ -1.32
VPS41-205ENST00000414632 CD163L1Q9NR16 1453 aa6.8□□□□□ -1.32
VPS41-205ENST00000414632 TK2O00142 265 aa6.8□□□□□ -1.32
VPS41-205ENST00000414632 ATP9BO43861 1147 aa6.8□□□□□ -1.32
VPS41-205ENST00000414632 FBXO45P0C2W1 286 aa6.8□□□□□ -1.32
VPS41-205ENST00000414632 BRICD5Q6PL45 260 aa6.8□□□□□ -1.32
VPS41-205ENST00000414632 BLOC1S3Q6QNY0 202 aa6.8□□□□□ -1.32
VPS41-205ENST00000414632 RNF19BQ6ZMZ0 732 aa6.8□□□□□ -1.32
VPS41-205ENST00000414632 ABTB2Q8N961 1025 aa6.8□□□□□ -1.32
VPS41-205ENST00000414632 POLR3GLQ9BT43 218 aa6.8□□□□□ -1.32
VPS41-205ENST00000414632 PRR14Q9BWN1 585 aa6.8□□□□□ -1.32
VPS41-205ENST00000414632 VRTNQ9H8Y1 702 aa6.8□□□□□ -1.32
VPS41-205ENST00000414632 USP21Q9UK80 565 aa6.8□□□□□ -1.32
VPS41-205ENST00000414632 MTMR7Q9Y216 660 aa6.8□□□□□ -1.32
VPS41-205ENST00000414632 BRWD3Q6RI45 1802 aa6.8□□□□□ -1.32
VPS41-205ENST00000414632 KTN1Q86UP2 1357 aaKnown RBP6.8□□□□□ -1.32
VPS41-205ENST00000414632 ZBBXA8MT70 800 aa6.79□□□□□ -1.32
VPS41-205ENST00000414632 ZNF772Q68DY9 489 aaPredicted RBP6.79□□□□□ -1.32
VPS41-205ENST00000414632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.79□□□□□ -1.32
VPS41-205ENST00000414632 SLC12A5Q9H2X9 1139 aa6.79□□□□□ -1.32
VPS41-205ENST00000414632 FKBPLQ9UIM3 349 aa6.79□□□□□ -1.32
VPS41-205ENST00000414632 SALL2Q9Y467 1007 aaPredicted RBP6.79□□□□□ -1.32
VPS41-205ENST00000414632 A0A1W2PP64 1363 aa6.79□□□□□ -1.32
VPS41-205ENST00000414632 BCL9LQ86UU0 1499 aa6.79□□□□□ -1.32
VPS41-205ENST00000414632 GLI3P10071 1580 aa6.78□□□□□ -1.32
VPS41-205ENST00000414632 USP54Q70EL1 1684 aa6.78□□□□□ -1.32
VPS41-205ENST00000414632 CPSF1Q10570 1443 aaKnown RBP6.78□□□□□ -1.32
VPS41-205ENST00000414632 HSPA5P11021 654 aaKnown RBP6.78□□□□□ -1.32
VPS41-205ENST00000414632 ZC3H6P61129 1189 aaKnown RBP6.78□□□□□ -1.32
VPS41-205ENST00000414632 TMF1P82094 1093 aa6.78□□□□□ -1.32
VPS41-205ENST00000414632 CHRNA2Q15822 529 aa6.78□□□□□ -1.32
VPS41-205ENST00000414632 SCUBE3Q8IX30 993 aa6.78□□□□□ -1.32
VPS41-205ENST00000414632 QTRT2Q9H974 415 aaKnown RBP6.78□□□□□ -1.32
VPS41-205ENST00000414632 KIAA0232Q92628 1395 aa6.78□□□□□ -1.32
VPS41-205ENST00000414632 LMO7Q8WWI1 1683 aa6.77□□□□□ -1.32
VPS41-205ENST00000414632 TTC21BQ7Z4L5 1316 aa6.77□□□□□ -1.32
VPS41-205ENST00000414632 RGS12O14924 1447 aa6.77□□□□□ -1.33
VPS41-205ENST00000414632 ATRNO75882 1429 aa6.77□□□□□ -1.33
VPS41-205ENST00000414632 SSH2Q76I76 1423 aa6.77□□□□□ -1.33
VPS41-205ENST00000414632 SLIT3O75094 1523 aa6.77□□□□□ -1.33
VPS41-205ENST00000414632 SLIT2O94813 1529 aa6.77□□□□□ -1.33
VPS41-205ENST00000414632 FAM83GA6ND36 823 aa6.77□□□□□ -1.33
VPS41-205ENST00000414632 TMEM88BA6NKF7 163 aa6.77□□□□□ -1.33
VPS41-205ENST00000414632 PPP4CP60510 307 aa6.77□□□□□ -1.33
VPS41-205ENST00000414632 NME9Q86XW9 330 aa6.77□□□□□ -1.33
VPS41-205ENST00000414632 COL18A1P39060 1754 aa6.77□□□□□ -1.33
VPS41-205ENST00000414632 PIK3CDO00329 1044 aa6.76□□□□□ -1.33
VPS41-205ENST00000414632 FMNL1O95466 1100 aaPredicted RBP6.76□□□□□ -1.33
VPS41-205ENST00000414632 F12P00748 615 aaPredicted RBP6.76□□□□□ -1.33
VPS41-205ENST00000414632 RXRBP28702 533 aa6.76□□□□□ -1.33
VPS41-205ENST00000414632 HDGFL2Q7Z4V5 671 aaPredicted RBP6.76□□□□□ -1.33
VPS41-205ENST00000414632 ANKK1Q8NFD2 765 aa6.76□□□□□ -1.33
VPS41-205ENST00000414632 THAP11Q96EK4 314 aa6.76□□□□□ -1.33
VPS41-205ENST00000414632 PRDM11Q9NQV5 511 aa6.76□□□□□ -1.33
VPS41-205ENST00000414632 BTG4Q9NY30 223 aa6.76□□□□□ -1.33
VPS41-205ENST00000414632 MAP10Q9P2G4 905 aa6.76□□□□□ -1.33
VPS41-205ENST00000414632 WNK3Q9BYP7 1800 aa6.76□□□□□ -1.33
VPS41-205ENST00000414632 NFAT5O94916 1531 aa6.76□□□□□ -1.33
VPS41-205ENST00000414632 USP19O94966 1318 aa6.76□□□□□ -1.33
VPS41-205ENST00000414632 RGPD2P0DJD1 1756 aa6.75□□□□□ -1.33
VPS41-205ENST00000414632 CAMTA1Q9Y6Y1 1673 aa6.75□□□□□ -1.33
VPS41-205ENST00000414632 NR1I2O75469 434 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms