RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 CHMP4AQ9BY43 222 aa14.22□□□□□ -0.13
LINC00330-201ENST00000414562 ZBTB40Q9NUA8 1239 aa14.22□□□□□ -0.13
LINC00330-201ENST00000414562 DBF4Q9UBU7 674 aaPredicted RBP14.22□□□□□ -0.13
LINC00330-201ENST00000414562 FLIIQ13045 1269 aa14.21□□□□□ -0.13
LINC00330-201ENST00000414562 XAGE3Q8WTP9 111 aa14.21□□□□□ -0.13
LINC00330-201ENST00000414562 SKAP1Q86WV1 359 aa14.2□□□□□ -0.14
LINC00330-201ENST00000414562 RBM19Q9Y4C8 960 aaKnown RBP14.2□□□□□ -0.14
LINC00330-201ENST00000414562 ADCY9O60503 1353 aa14.2□□□□□ -0.14
LINC00330-201ENST00000414562 C4BP0C0L5 1744 aa14.2□□□□□ -0.14
LINC00330-201ENST00000414562 AIMP1Q12904 312 aaKnown RBP14.2□□□□□ -0.14
LINC00330-201ENST00000414562 COPS6Q7L5N1 327 aa14.2□□□□□ -0.14
LINC00330-201ENST00000414562 TEX13AQ9BXU3 409 aaPredicted RBP14.2□□□□□ -0.14
LINC00330-201ENST00000414562 CCDC87Q9NVE4 849 aa14.2□□□□□ -0.14
LINC00330-201ENST00000414562 STARD3NLO95772 234 aa14.19□□□□□ -0.14
LINC00330-201ENST00000414562 ZBTB7BO15156 539 aaPredicted RBP14.19□□□□□ -0.14
LINC00330-201ENST00000414562 PDIA4P13667 645 aaKnown RBP14.19□□□□□ -0.14
LINC00330-201ENST00000414562 EIF5P55010 431 aaKnown RBP14.19□□□□□ -0.14
LINC00330-201ENST00000414562 ZNF827Q17R98 1081 aa14.19□□□□□ -0.14
LINC00330-201ENST00000414562 INTS3Q68E01 1043 aaKnown RBP14.19□□□□□ -0.14
LINC00330-201ENST00000414562 UBR3Q6ZT12 1888 aa14.18□□□□□ -0.14
LINC00330-201ENST00000414562 RGS3P49796 1198 aa14.18□□□□□ -0.14
LINC00330-201ENST00000414562 UPF1Q92900 1129 aaKnown RBP eCLIP14.18□□□□□ -0.14
LINC00330-201ENST00000414562 TUBGCP6Q96RT7 1819 aa14.18□□□□□ -0.14
LINC00330-201ENST00000414562 RGPD3A6NKT7 1758 aaPredicted RBP14.17□□□□□ -0.14
LINC00330-201ENST00000414562 RGPD4Q7Z3J3 1758 aa14.17□□□□□ -0.14
LINC00330-201ENST00000414562 PI4KAP2A4QPH2 592 aa14.17□□□□□ -0.14
LINC00330-201ENST00000414562 FKBP5Q13451 457 aaPredicted RBP14.17□□□□□ -0.14
LINC00330-201ENST00000414562 SLC4A10Q6U841 1118 aa14.17□□□□□ -0.14
LINC00330-201ENST00000414562 PI4KAP1Q8N8J0 262 aa14.17□□□□□ -0.14
LINC00330-201ENST00000414562 HYPKQ9NX55 129 aa14.17□□□□□ -0.14
LINC00330-201ENST00000414562 ERBB4Q15303 1308 aa14.17□□□□□ -0.14
LINC00330-201ENST00000414562 CNTNAP4Q9C0A0 1308 aa14.17□□□□□ -0.14
LINC00330-201ENST00000414562 HDAC1Q13547 482 aaPredicted RBP14.17□□□□□ -0.14
LINC00330-201ENST00000414562 HOMEZQ8IX15 550 aa14.17□□□□□ -0.14
LINC00330-201ENST00000414562 ZNF330Q9Y3S2 320 aaPredicted RBP14.17□□□□□ -0.14
LINC00330-201ENST00000414562 NUP188Q5SRE5 1749 aa14.17□□□□□ -0.14
LINC00330-201ENST00000414562 SLC27A3Q5K4L6 730 aa14.16□□□□□ -0.14
LINC00330-201ENST00000414562 RC3H1Q5TC82 1133 aaKnown RBP14.16□□□□□ -0.14
LINC00330-201ENST00000414562 TBC1D2BQ9UPU7 963 aa14.16□□□□□ -0.14
LINC00330-201ENST00000414562 ARFGEF2Q9Y6D5 1785 aa14.16□□□□□ -0.14
LINC00330-201ENST00000414562 CCT4P50991 539 aaKnown RBP14.15□□□□□ -0.14
LINC00330-201ENST00000414562 HLFQ16534 295 aa14.15□□□□□ -0.14
LINC00330-201ENST00000414562 AKT1S1Q96B36 256 aa14.15□□□□□ -0.14
LINC00330-201ENST00000414562 C1orf115Q9H7X2 142 aa14.15□□□□□ -0.14
LINC00330-201ENST00000414562 GNPATO15228 680 aa14.15□□□□□ -0.14
LINC00330-201ENST00000414562 IL6STP40189 918 aaPredicted RBP14.15□□□□□ -0.14
LINC00330-201ENST00000414562 ZBTB3Q9H5J0 574 aa14.15□□□□□ -0.14
LINC00330-201ENST00000414562 MAP3K2Q9Y2U5 619 aa14.15□□□□□ -0.14
LINC00330-201ENST00000414562 RPS6KA4O75676 772 aa14.14□□□□□ -0.15
LINC00330-201ENST00000414562 C4AP0C0L4 1744 aa14.14□□□□□ -0.15
LINC00330-201ENST00000414562 KSR2Q6VAB6 950 aa14.14□□□□□ -0.15
LINC00330-201ENST00000414562 BCL2L12Q9HB09 334 aa14.14□□□□□ -0.15
LINC00330-201ENST00000414562 SRP68Q9UHB9 627 aaKnown RBP14.14□□□□□ -0.15
LINC00330-201ENST00000414562 PDZRN3Q9UPQ7 1066 aa14.14□□□□□ -0.15
LINC00330-201ENST00000414562 NUP98P52948 1817 aa14.13□□□□□ -0.15
LINC00330-201ENST00000414562 IGKV5-2P06315 115 aa14.13□□□□□ -0.15
LINC00330-201ENST00000414562 ANKRD13DQ6ZTN6 518 aa14.13□□□□□ -0.15
LINC00330-201ENST00000414562 COL15A1P39059 1388 aa14.12□□□□□ -0.15
LINC00330-201ENST00000414562 CAMTA2O94983 1202 aa14.12□□□□□ -0.15
LINC00330-201ENST00000414562 ARHGEF1Q92888 912 aaKnown RBP14.12□□□□□ -0.15
LINC00330-201ENST00000414562 PDGFDQ9GZP0 370 aaPredicted RBP14.12□□□□□ -0.15
LINC00330-201ENST00000414562 PHF14O94880 888 aa14.12□□□□□ -0.15
LINC00330-201ENST00000414562 PDE4AP27815 886 aa14.12□□□□□ -0.15
LINC00330-201ENST00000414562 CWF19L2Q2TBE0 894 aaKnown RBP14.12□□□□□ -0.15
LINC00330-201ENST00000414562 BEND3Q5T5X7 828 aa14.12□□□□□ -0.15
LINC00330-201ENST00000414562 DNAAF4Q8WXU2 420 aa14.12□□□□□ -0.15
LINC00330-201ENST00000414562 N4BP2Q86UW6 1770 aaPredicted RBP14.11□□□□□ -0.15
LINC00330-201ENST00000414562 ATP5J2-PTCD1G3V325 749 aa14.11□□□□□ -0.15
LINC00330-201ENST00000414562 BAG6P46379 1132 aa14.11□□□□□ -0.15
LINC00330-201ENST00000414562 DZIP3Q86Y13 1208 aaKnown RBP14.11□□□□□ -0.15
LINC00330-201ENST00000414562 PLBD2Q8NHP8 589 aa14.11□□□□□ -0.15
LINC00330-201ENST00000414562 MAP3K15Q6ZN16 1313 aa14.1□□□□□ -0.15
LINC00330-201ENST00000414562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.1□□□□□ -0.15
LINC00330-201ENST00000414562 RIC3Q7Z5B4 369 aa14.1□□□□□ -0.15
LINC00330-201ENST00000414562 BCORQ6W2J9 1755 aa14.1□□□□□ -0.15
LINC00330-201ENST00000414562 SMC5Q8IY18 1101 aa14.1□□□□□ -0.15
LINC00330-201ENST00000414562 JARID2Q92833 1246 aaPredicted RBP14.1□□□□□ -0.15
LINC00330-201ENST00000414562 AK7Q96M32 723 aa14.1□□□□□ -0.15
LINC00330-201ENST00000414562 MEIS3Q99687 375 aa14.1□□□□□ -0.15
LINC00330-201ENST00000414562 MYD88Q99836 296 aa14.1□□□□□ -0.15
LINC00330-201ENST00000414562 METTL22Q9BUU2 404 aaPredicted RBP14.1□□□□□ -0.15
LINC00330-201ENST00000414562 COL23A1Q86Y22 540 aaPredicted RBP14.09□□□□□ -0.15
LINC00330-201ENST00000414562 BACH2Q9BYV9 841 aa14.09□□□□□ -0.15
LINC00330-201ENST00000414562 RTCBQ9Y3I0 505 aaKnown RBP14.09□□□□□ -0.15
LINC00330-201ENST00000414562 PNPLA7Q6ZV29 1317 aa14.09□□□□□ -0.15
LINC00330-201ENST00000414562 PDE4CQ08493 712 aa14.08□□□□□ -0.15
LINC00330-201ENST00000414562 SF3B2Q13435 895 aaKnown RBP14.08□□□□□ -0.15
LINC00330-201ENST00000414562 CCDC125Q86Z20 511 aa14.08□□□□□ -0.15
LINC00330-201ENST00000414562 GNAI3P08754 354 aa14.08□□□□□ -0.16
LINC00330-201ENST00000414562 USPL1Q5W0Q7 1092 aa14.08□□□□□ -0.16
LINC00330-201ENST00000414562 GIGYF2Q6Y7W6 1299 aaKnown RBP14.08□□□□□ -0.16
LINC00330-201ENST00000414562 GCC1Q96CN9 775 aa14.08□□□□□ -0.16
LINC00330-201ENST00000414562 AFDNP55196 1824 aaKnown RBP14.08□□□□□ -0.16
LINC00330-201ENST00000414562 PXDNLA1KZ92 1463 aa14.07□□□□□ -0.16
LINC00330-201ENST00000414562 UBN2Q6ZU65 1347 aa14.07□□□□□ -0.16
LINC00330-201ENST00000414562 GPTP24298 496 aa14.07□□□□□ -0.16
LINC00330-201ENST00000414562 RPAP2Q8IXW5 612 aaPredicted RBP14.07□□□□□ -0.16
LINC00330-201ENST00000414562 SYNE4Q8N205 404 aa14.07□□□□□ -0.16
LINC00330-201ENST00000414562 ISCA1Q9BUE6 129 aa14.07□□□□□ -0.16
LINC00330-201ENST00000414562 USP44Q9H0E7 712 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms