RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 TMC1Q8TDI8 760 aa8.42□□□□□ -1.06
NOD1-203ENST00000413433 COL26A1Q96A83 441 aa8.42□□□□□ -1.06
NOD1-203ENST00000413433 ZFP42Q96MM3 310 aa8.42□□□□□ -1.06
NOD1-203ENST00000413433 ESF1Q9H501 851 aaKnown RBP8.42□□□□□ -1.06
NOD1-203ENST00000413433 RAPGEF2Q9Y4G8 1499 aa8.42□□□□□ -1.06
NOD1-203ENST00000413433 IQGAP2Q13576 1575 aa8.42□□□□□ -1.06
NOD1-203ENST00000413433 SCAMP3O14828 347 aaKnown RBP8.41□□□□□ -1.06
NOD1-203ENST00000413433 FOXO3O43524 673 aa8.41□□□□□ -1.06
NOD1-203ENST00000413433 P4HBP07237 508 aaKnown RBP8.41□□□□□ -1.06
NOD1-203ENST00000413433 ECM1Q16610 540 aa8.41□□□□□ -1.06
NOD1-203ENST00000413433 LINC01559Q495D7 138 aa8.41□□□□□ -1.06
NOD1-203ENST00000413433 CAPN12Q6ZSI9 719 aa8.41□□□□□ -1.06
NOD1-203ENST00000413433 BACH2Q9BYV9 841 aa8.41□□□□□ -1.06
NOD1-203ENST00000413433 MRS2Q9HD23 443 aa8.41□□□□□ -1.06
NOD1-203ENST00000413433 CDV3Q9UKY7 258 aaKnown RBP8.41□□□□□ -1.06
NOD1-203ENST00000413433 VSIG8P0DPA2 414 aa8.4□□□□□ -1.06
NOD1-203ENST00000413433 RAB15P59190 212 aa8.4□□□□□ -1.06
NOD1-203ENST00000413433 SH3BP2P78314 561 aa8.4□□□□□ -1.06
NOD1-203ENST00000413433 XPCQ01831 940 aaPredicted RBP8.4□□□□□ -1.06
NOD1-203ENST00000413433 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.4□□□□□ -1.06
NOD1-203ENST00000413433 RBCK1Q9BYM8 510 aa8.4□□□□□ -1.06
NOD1-203ENST00000413433 BRPF3Q9ULD4 1205 aa8.4□□□□□ -1.06
NOD1-203ENST00000413433 EPRSP07814 1512 aaKnown RBP8.39□□□□□ -1.07
NOD1-203ENST00000413433 UHRF1BP1LA0JNW5 1464 aa8.39□□□□□ -1.07
NOD1-203ENST00000413433 IGFBP4P22692 258 aa8.39□□□□□ -1.07
NOD1-203ENST00000413433 TMC7Q7Z402 723 aa8.39□□□□□ -1.07
NOD1-203ENST00000413433 BAP1Q92560 729 aa8.39□□□□□ -1.07
NOD1-203ENST00000413433 FOXJ1Q92949 421 aa8.39□□□□□ -1.07
NOD1-203ENST00000413433 PURBQ96QR8 312 aaKnown RBP8.39□□□□□ -1.07
NOD1-203ENST00000413433 MPSTP25325 297 aa8.38□□□□□ -1.07
NOD1-203ENST00000413433 AAMPQ13685 434 aa8.38□□□□□ -1.07
NOD1-203ENST00000413433 MRPL58Q14197 206 aaKnown RBP8.38□□□□□ -1.07
NOD1-203ENST00000413433 ZNF511Q8NB15 262 aa8.38□□□□□ -1.07
NOD1-203ENST00000413433 ZNF358Q9NW07 568 aa8.38□□□□□ -1.07
NOD1-203ENST00000413433 KDM5BQ9UGL1 1544 aa8.38□□□□□ -1.07
NOD1-203ENST00000413433 ADGRL1O94910 1474 aa8.38□□□□□ -1.07
NOD1-203ENST00000413433 ESPNB1AK53 854 aa8.37□□□□□ -1.07
NOD1-203ENST00000413433 MAPK8P45983 427 aa8.37□□□□□ -1.07
NOD1-203ENST00000413433 SCARF1Q14162 830 aa8.37□□□□□ -1.07
NOD1-203ENST00000413433 SCG3Q8WXD2 468 aaKnown RBP8.37□□□□□ -1.07
NOD1-203ENST00000413433 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.37□□□□□ -1.07
NOD1-203ENST00000413433 GLI2P10070 1586 aa8.36□□□□□ -1.07
NOD1-203ENST00000413433 UGGT2Q9NYU1 1516 aa8.36□□□□□ -1.07
NOD1-203ENST00000413433 BACH1O14867 736 aa8.36□□□□□ -1.07
NOD1-203ENST00000413433 SMARCA5O60264 1052 aaPredicted RBP8.36□□□□□ -1.07
NOD1-203ENST00000413433 HDLBPQ00341 1268 aaKnown RBP8.36□□□□□ -1.07
NOD1-203ENST00000413433 TMEM151AQ8N4L1 468 aa8.36□□□□□ -1.07
NOD1-203ENST00000413433 GAS2L2Q8NHY3 880 aa8.36□□□□□ -1.07
NOD1-203ENST00000413433 PPRC1Q5VV67 1664 aaKnown RBP8.35□□□□□ -1.07
NOD1-203ENST00000413433 TREHO43280 583 aa8.35□□□□□ -1.07
NOD1-203ENST00000413433 LDHBP07195 334 aaKnown RBP8.35□□□□□ -1.07
NOD1-203ENST00000413433 NPR3P17342 541 aa8.35□□□□□ -1.07
NOD1-203ENST00000413433 ATP2B2Q01814 1243 aa8.35□□□□□ -1.07
NOD1-203ENST00000413433 FMR1Q06787 632 aaKnown RBP eCLIP8.35□□□□□ -1.07
NOD1-203ENST00000413433 C9orf131Q5VYM1 1079 aa8.35□□□□□ -1.07
NOD1-203ENST00000413433 ALKBH2Q6NS38 261 aa8.35□□□□□ -1.07
NOD1-203ENST00000413433 MRPL14Q6P1L8 145 aaKnown RBP8.35□□□□□ -1.07
NOD1-203ENST00000413433 TMEM87AQ8NBN3 555 aa8.35□□□□□ -1.07
NOD1-203ENST00000413433 SPATA32Q96LK8 384 aa8.35□□□□□ -1.07
NOD1-203ENST00000413433 DMRTB1Q96MA1 342 aa8.35□□□□□ -1.07
NOD1-203ENST00000413433 CITED4Q96RK1 184 aa8.35□□□□□ -1.07
NOD1-203ENST00000413433 CD109Q6YHK3 1445 aa8.35□□□□□ -1.07
NOD1-203ENST00000413433 WDR7Q9Y4E6 1490 aa8.34□□□□□ -1.07
NOD1-203ENST00000413433 KIAA0556O60303 1618 aa8.34□□□□□ -1.07
NOD1-203ENST00000413433 GSK3AP49840 483 aa8.34□□□□□ -1.07
NOD1-203ENST00000413433 C4orf48Q5BLP8 95 aa8.34□□□□□ -1.07
NOD1-203ENST00000413433 C16orf46Q6P387 395 aa8.34□□□□□ -1.07
NOD1-203ENST00000413433 C1QTNF2Q9BXJ5 285 aa8.34□□□□□ -1.07
NOD1-203ENST00000413433 ZCCHC11Q5TAX3 1644 aaKnown RBP8.33□□□□□ -1.08
NOD1-203ENST00000413433 PRPF40AO75400 957 aaKnown RBP8.33□□□□□ -1.08
NOD1-203ENST00000413433 PLCB3Q01970 1234 aa8.33□□□□□ -1.08
NOD1-203ENST00000413433 TRMT44Q8IYL2 757 aaKnown RBP8.33□□□□□ -1.08
NOD1-203ENST00000413433 TRIM52Q96A61 297 aa8.33□□□□□ -1.08
NOD1-203ENST00000413433 KCTD15Q96SI1 283 aaPredicted RBP8.33□□□□□ -1.08
NOD1-203ENST00000413433 VTI1BQ9UEU0 232 aa8.33□□□□□ -1.08
NOD1-203ENST00000413433 PARP2Q9UGN5 583 aa8.33□□□□□ -1.08
NOD1-203ENST00000413433 TLL2Q9Y6L7 1015 aa8.33□□□□□ -1.08
NOD1-203ENST00000413433 ATAD2Q6PL18 1390 aa8.33□□□□□ -1.08
NOD1-203ENST00000413433 TEX14Q8IWB6 1497 aa8.32□□□□□ -1.08
NOD1-203ENST00000413433 TMEM229AB2RXF0 380 aa8.32□□□□□ -1.08
NOD1-203ENST00000413433 RNF225M0QZC1 329 aaPredicted RBP8.32□□□□□ -1.08
NOD1-203ENST00000413433 PPM1GO15355 546 aaPredicted RBP8.32□□□□□ -1.08
NOD1-203ENST00000413433 SORBS3O60504 671 aa8.32□□□□□ -1.08
NOD1-203ENST00000413433 GDF10P55107 478 aa8.32□□□□□ -1.08
NOD1-203ENST00000413433 PSMD2Q13200 908 aa8.32□□□□□ -1.08
NOD1-203ENST00000413433 PDE3BQ13370 1112 aa8.32□□□□□ -1.08
NOD1-203ENST00000413433 FAM9AQ8IZU1 332 aaPredicted RBP8.32□□□□□ -1.08
NOD1-203ENST00000413433 TNS4Q8IZW8 715 aa8.32□□□□□ -1.08
NOD1-203ENST00000413433 PIK3R5Q8WYR1 880 aa8.32□□□□□ -1.08
NOD1-203ENST00000413433 TANGO6Q9C0B7 1094 aa8.32□□□□□ -1.08
NOD1-203ENST00000413433 GDF11O95390 407 aa8.31□□□□□ -1.08
NOD1-203ENST00000413433 RAPGEF3O95398 923 aa8.31□□□□□ -1.08
NOD1-203ENST00000413433 EIF1AXP47813 144 aaKnown RBP8.31□□□□□ -1.08
NOD1-203ENST00000413433 EHHADHQ08426 723 aa8.31□□□□□ -1.08
NOD1-203ENST00000413433 NT5DC4Q86YG4 428 aa8.31□□□□□ -1.08
NOD1-203ENST00000413433 MPNDQ8N594 471 aa8.31□□□□□ -1.08
NOD1-203ENST00000413433 FAM161BQ96MY7 647 aa8.31□□□□□ -1.08
NOD1-203ENST00000413433 DUSP9Q99956 384 aaKnown RBP8.31□□□□□ -1.08
NOD1-203ENST00000413433 CCSER2Q9H7U1 834 aa8.31□□□□□ -1.08
NOD1-203ENST00000413433 MAP3K4Q9Y6R4 1608 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms