RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 TRIM27P14373 513 aa14.8□□□□□ -0.04
HDAC9-206ENST00000413380 KCNQ4P56696 695 aa14.8□□□□□ -0.04
HDAC9-206ENST00000413380 PDE3AQ14432 1141 aa14.8□□□□□ -0.04
HDAC9-206ENST00000413380 UPF1Q92900 1129 aaKnown RBP eCLIP14.8□□□□□ -0.04
HDAC9-206ENST00000413380 API5Q9BZZ5 524 aaKnown RBP14.8□□□□□ -0.04
HDAC9-206ENST00000413380 ABCC4O15439 1325 aa14.8□□□□□ -0.04
HDAC9-206ENST00000413380 ADCY9O60503 1353 aa14.79□□□□□ -0.04
HDAC9-206ENST00000413380 COL15A1P39059 1388 aa14.79□□□□□ -0.04
HDAC9-206ENST00000413380 EN1Q05925 392 aaPredicted RBP14.79□□□□□ -0.04
HDAC9-206ENST00000413380 AKT1S1Q96B36 256 aa14.79□□□□□ -0.04
HDAC9-206ENST00000413380 ATP10DQ9P241 1426 aa14.79□□□□□ -0.04
HDAC9-206ENST00000413380 AFDNP55196 1824 aaKnown RBP14.78□□□□□ -0.04
HDAC9-206ENST00000413380 MS4A1P11836 297 aa14.78□□□□□ -0.04
HDAC9-206ENST00000413380 MYL6BP14649 208 aa14.78□□□□□ -0.04
HDAC9-206ENST00000413380 PIP4K2AP48426 406 aaPredicted RBP14.78□□□□□ -0.04
HDAC9-206ENST00000413380 EZH2Q15910 746 aaKnown RBP14.78□□□□□ -0.04
HDAC9-206ENST00000413380 COPS6Q7L5N1 327 aa14.78□□□□□ -0.04
HDAC9-206ENST00000413380 XAGE3Q8WTP9 111 aa14.78□□□□□ -0.04
HDAC9-206ENST00000413380 DDX58O95786 925 aaKnown RBP14.77□□□□□ -0.05
HDAC9-206ENST00000413380 CANXP27824 592 aaKnown RBP14.77□□□□□ -0.05
HDAC9-206ENST00000413380 SSFA2P28290 1259 aa14.77□□□□□ -0.05
HDAC9-206ENST00000413380 FKBP5Q13451 457 aaPredicted RBP14.77□□□□□ -0.05
HDAC9-206ENST00000413380 KSR2Q6VAB6 950 aa14.77□□□□□ -0.05
HDAC9-206ENST00000413380 ILDR2Q71H61 639 aa14.77□□□□□ -0.05
HDAC9-206ENST00000413380 PLBD2Q8NHP8 589 aa14.77□□□□□ -0.05
HDAC9-206ENST00000413380 A0A087WZG4 1122 aa14.76□□□□□ -0.05
HDAC9-206ENST00000413380 ERVV-1B6SEH8 477 aa14.76□□□□□ -0.05
HDAC9-206ENST00000413380 GNPATO15228 680 aa14.76□□□□□ -0.05
HDAC9-206ENST00000413380 TTLL7Q6ZT98 887 aa14.76□□□□□ -0.05
HDAC9-206ENST00000413380 DEFB132Q7Z7B7 95 aa14.76□□□□□ -0.05
HDAC9-206ENST00000413380 FRAT1Q92837 279 aaPredicted RBP14.76□□□□□ -0.05
HDAC9-206ENST00000413380 AK7Q96M32 723 aa14.76□□□□□ -0.05
HDAC9-206ENST00000413380 RTCBQ9Y3I0 505 aaKnown RBP14.76□□□□□ -0.05
HDAC9-206ENST00000413380 COL24A1Q17RW2 1714 aa14.75□□□□□ -0.05
HDAC9-206ENST00000413380 MAP3K15Q6ZN16 1313 aa14.75□□□□□ -0.05
HDAC9-206ENST00000413380 PI4KAP2A4QPH2 592 aa14.75□□□□□ -0.05
HDAC9-206ENST00000413380 PLIN1O60240 522 aa14.75□□□□□ -0.05
HDAC9-206ENST00000413380 INTS3Q68E01 1043 aaKnown RBP14.75□□□□□ -0.05
HDAC9-206ENST00000413380 ANKRD13DQ6ZTN6 518 aa14.75□□□□□ -0.05
HDAC9-206ENST00000413380 AMIGO3Q86WK7 504 aa14.75□□□□□ -0.05
HDAC9-206ENST00000413380 DZIP1LQ8IYY4 767 aaKnown RBP14.75□□□□□ -0.05
HDAC9-206ENST00000413380 PI4KAP1Q8N8J0 262 aa14.75□□□□□ -0.05
HDAC9-206ENST00000413380 DNAAF4Q8WXU2 420 aa14.75□□□□□ -0.05
HDAC9-206ENST00000413380 RLBP1P12271 317 aa14.74□□□□□ -0.05
HDAC9-206ENST00000413380 ZNF827Q17R98 1081 aa14.74□□□□□ -0.05
HDAC9-206ENST00000413380 TNNQ9UQP3 1299 aa14.74□□□□□ -0.05
HDAC9-206ENST00000413380 CAMTA2O94983 1202 aa14.73□□□□□ -0.05
HDAC9-206ENST00000413380 C20orf194Q5TEA3 1177 aa14.73□□□□□ -0.05
HDAC9-206ENST00000413380 GIGYF2Q6Y7W6 1299 aaKnown RBP14.73□□□□□ -0.05
HDAC9-206ENST00000413380 KIF6Q6ZMV9 814 aa14.73□□□□□ -0.05
HDAC9-206ENST00000413380 DZIP3Q86Y13 1208 aaKnown RBP14.73□□□□□ -0.05
HDAC9-206ENST00000413380 FLAD1Q8NFF5 587 aa14.73□□□□□ -0.05
HDAC9-206ENST00000413380 METTL22Q9BUU2 404 aaPredicted RBP14.73□□□□□ -0.05
HDAC9-206ENST00000413380 ANO8Q9HCE9 1232 aaPredicted RBP14.73□□□□□ -0.05
HDAC9-206ENST00000413380 NARFQ9UHQ1 456 aa14.73□□□□□ -0.05
HDAC9-206ENST00000413380 MAP3K2Q9Y2U5 619 aa14.73□□□□□ -0.05
HDAC9-206ENST00000413380 F6X3S4 739 aa14.72□□□□□ -0.05
HDAC9-206ENST00000413380 CCT4P50991 539 aaKnown RBP14.72□□□□□ -0.05
HDAC9-206ENST00000413380 AIMP1Q12904 312 aaKnown RBP14.72□□□□□ -0.05
HDAC9-206ENST00000413380 TRIM28Q13263 835 aaKnown RBP14.72□□□□□ -0.05
HDAC9-206ENST00000413380 BEND3Q5T5X7 828 aa14.72□□□□□ -0.05
HDAC9-206ENST00000413380 CLEC4GQ6UXB4 293 aa14.72□□□□□ -0.05
HDAC9-206ENST00000413380 FTSJ3Q8IY81 847 aaKnown RBP14.72□□□□□ -0.05
HDAC9-206ENST00000413380 ARHGEF1Q92888 912 aaKnown RBP14.72□□□□□ -0.05
HDAC9-206ENST00000413380 USP42Q9H9J4 1324 aaKnown RBP14.71□□□□□ -0.05
HDAC9-206ENST00000413380 CASZ1Q86V15 1759 aa14.71□□□□□ -0.05
HDAC9-206ENST00000413380 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.71□□□□□ -0.05
HDAC9-206ENST00000413380 SLC15A2Q16348 729 aa14.71□□□□□ -0.05
HDAC9-206ENST00000413380 TRAPPC3LQ5T215 181 aa14.71□□□□□ -0.05
HDAC9-206ENST00000413380 RIC3Q7Z5B4 369 aa14.71□□□□□ -0.05
HDAC9-206ENST00000413380 NPM2Q86SE8 214 aaKnown RBP14.71□□□□□ -0.05
HDAC9-206ENST00000413380 LINS1Q8NG48 757 aa14.71□□□□□ -0.05
HDAC9-206ENST00000413380 PANK1Q8TE04 598 aa14.71□□□□□ -0.05
HDAC9-206ENST00000413380 LAMB2P55268 1798 aa14.7□□□□□ -0.06
HDAC9-206ENST00000413380 PNPLA7Q6ZV29 1317 aa14.7□□□□□ -0.06
HDAC9-206ENST00000413380 ALDH1L1O75891 902 aa14.7□□□□□ -0.06
HDAC9-206ENST00000413380 MVPQ14764 893 aaKnown RBP14.7□□□□□ -0.06
HDAC9-206ENST00000413380 HSP90AB3PQ58FF7 597 aa14.7□□□□□ -0.06
HDAC9-206ENST00000413380 TMEM57Q8N5G2 664 aa14.7□□□□□ -0.06
HDAC9-206ENST00000413380 CLUAP1Q96AJ1 413 aa14.7□□□□□ -0.06
HDAC9-206ENST00000413380 ISCA1Q9BUE6 129 aa14.7□□□□□ -0.06
HDAC9-206ENST00000413380 ZBTB3Q9H5J0 574 aa14.7□□□□□ -0.06
HDAC9-206ENST00000413380 TBC1D2BQ9UPU7 963 aa14.7□□□□□ -0.06
HDAC9-206ENST00000413380 IGKV5-2P06315 115 aa14.69□□□□□ -0.06
HDAC9-206ENST00000413380 TCIRG1Q13488 830 aa14.69□□□□□ -0.06
HDAC9-206ENST00000413380 HLFQ16534 295 aa14.69□□□□□ -0.06
HDAC9-206ENST00000413380 BCL2L12Q9HB09 334 aa14.69□□□□□ -0.06
HDAC9-206ENST00000413380 STK32BQ9NY57 414 aa14.69□□□□□ -0.06
HDAC9-206ENST00000413380 ZNF652Q9Y2D9 606 aa14.69□□□□□ -0.06
HDAC9-206ENST00000413380 ZNF330Q9Y3S2 320 aaPredicted RBP14.69□□□□□ -0.06
HDAC9-206ENST00000413380 NRXN2Q9P2S2 1712 aa14.69□□□□□ -0.06
HDAC9-206ENST00000413380 SPDYE2BA6NHP3 402 aa14.68□□□□□ -0.06
HDAC9-206ENST00000413380 NEURL1BA8MQ27 555 aa14.68□□□□□ -0.06
HDAC9-206ENST00000413380 SPDYE6P0CI01 402 aa14.68□□□□□ -0.06
HDAC9-206ENST00000413380 NEXNQ0ZGT2 675 aa14.68□□□□□ -0.06
HDAC9-206ENST00000413380 AAMPQ13685 434 aa14.68□□□□□ -0.06
HDAC9-206ENST00000413380 SPDYE2Q495Y8 402 aa14.68□□□□□ -0.06
HDAC9-206ENST00000413380 ZNF34Q8IZ26 560 aa14.68□□□□□ -0.06
HDAC9-206ENST00000413380 SRCIN1Q9C0H9 1055 aa14.68□□□□□ -0.06
HDAC9-206ENST00000413380 TFCP2L1Q9NZI6 479 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms