RNA–Protein interactions for RNA: ENST00000413013.6

SMIM29-203, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-203ENST00000413013 CCDC24Q8N4L8 307 aa23.44■■□□□ 1.34
SMIM29-203ENST00000413013 NUDCQ9Y266 331 aa23.44■■□□□ 1.34
SMIM29-203ENST00000413013 ZNF652Q9Y2D9 606 aa23.43■■□□□ 1.34
SMIM29-203ENST00000413013 RTF1Q92541 710 aaKnown RBP23.42■■□□□ 1.34
SMIM29-203ENST00000413013 PRPF40BQ6NWY9 871 aaKnown RBP23.41■■□□□ 1.34
SMIM29-203ENST00000413013 MASTLQ96GX5 879 aa23.41■■□□□ 1.34
SMIM29-203ENST00000413013 RSPH6AQ9H0K4 717 aa23.41■■□□□ 1.34
SMIM29-203ENST00000413013 SRGNP10124 158 aa23.4■■□□□ 1.34
SMIM29-203ENST00000413013 COL13A1Q5TAT6 717 aaPredicted RBP23.4■■□□□ 1.34
SMIM29-203ENST00000413013 NBPF5PQ86XG9 351 aaPredicted RBP23.4■■□□□ 1.34
SMIM29-203ENST00000413013 SLX4Q8IY92 1834 aa23.4■■□□□ 1.34
SMIM29-203ENST00000413013 CLEC4GQ6UXB4 293 aa23.39■■□□□ 1.33
SMIM29-203ENST00000413013 PHACTR3Q96KR7 559 aa23.39■■□□□ 1.33
SMIM29-203ENST00000413013 KCNQ3O43525 872 aa23.38■■□□□ 1.33
SMIM29-203ENST00000413013 TNS4Q8IZW8 715 aa23.38■■□□□ 1.33
SMIM29-203ENST00000413013 POTECB2RU33 542 aa23.37■■□□□ 1.33
SMIM29-203ENST00000413013 SNRPA1P09661 255 aaKnown RBP23.37■■□□□ 1.33
SMIM29-203ENST00000413013 HSPA1AP0DMV8 641 aaKnown RBP23.36■■□□□ 1.33
SMIM29-203ENST00000413013 HSPA1BP0DMV9 641 aaKnown RBP23.36■■□□□ 1.33
SMIM29-203ENST00000413013 U2AF1L5P0DN76 240 aaPredicted RBP23.36■■□□□ 1.33
SMIM29-203ENST00000413013 U2AF1Q01081 240 aaKnown RBP eCLIP23.36■■□□□ 1.33
SMIM29-203ENST00000413013 CCDC93Q567U6 631 aa23.36■■□□□ 1.33
SMIM29-203ENST00000413013 CHADLQ6NUI6 762 aa23.36■■□□□ 1.33
SMIM29-203ENST00000413013 USP16Q9Y5T5 823 aa23.36■■□□□ 1.33
SMIM29-203ENST00000413013 PCNTO95613 3336 aa23.35■■□□□ 1.33
SMIM29-203ENST00000413013 IQCA1LA6NCM1 817 aa23.35■■□□□ 1.33
SMIM29-203ENST00000413013 PIP4K2AP48426 406 aaPredicted RBP23.35■■□□□ 1.33
SMIM29-203ENST00000413013 RGL2O15211 777 aa23.34■■□□□ 1.33
SMIM29-203ENST00000413013 NPR1P16066 1061 aa23.34■■□□□ 1.33
SMIM29-203ENST00000413013 MCM10Q7L590 875 aa23.34■■□□□ 1.33
SMIM29-203ENST00000413013 LAMB4A4D0S4 1761 aa23.34■■□□□ 1.33
SMIM29-203ENST00000413013 DDNO94850 711 aaPredicted RBP23.33■■□□□ 1.33
SMIM29-203ENST00000413013 TPTE2Q6XPS3 522 aa23.33■■□□□ 1.33
SMIM29-203ENST00000413013 CREBZFQ9NS37 354 aa23.33■■□□□ 1.33
SMIM29-203ENST00000413013 SCN4AP35499 1836 aa23.32■■□□□ 1.32
SMIM29-203ENST00000413013 PRAMEF22A3QJZ6 481 aa23.32■■□□□ 1.32
SMIM29-203ENST00000413013 NIP7Q9Y221 180 aaKnown RBP eCLIP23.32■■□□□ 1.32
SMIM29-203ENST00000413013 HTATSF1O43719 755 aaKnown RBP23.31■■□□□ 1.32
SMIM29-203ENST00000413013 CAPN15O75808 1086 aa23.31■■□□□ 1.32
SMIM29-203ENST00000413013 FKBP4Q02790 459 aaKnown RBP eCLIP23.3■■□□□ 1.32
SMIM29-203ENST00000413013 NEFMP07197 916 aa23.29■■□□□ 1.32
SMIM29-203ENST00000413013 LDHDQ86WU2 507 aa23.29■■□□□ 1.32
SMIM29-203ENST00000413013 L3MBTL3Q96JM7 780 aaPredicted RBP23.29■■□□□ 1.32
SMIM29-203ENST00000413013 GTF2E1P29083 439 aaPredicted RBP23.28■■□□□ 1.32
SMIM29-203ENST00000413013 PPP2R1AP30153 589 aa23.28■■□□□ 1.32
SMIM29-203ENST00000413013 RTKN2Q8IZC4 609 aa23.28■■□□□ 1.32
SMIM29-203ENST00000413013 DCTN1Q14203 1278 aa23.27■■□□□ 1.32
SMIM29-203ENST00000413013 C7orf43Q8WVR3 580 aa23.27■■□□□ 1.32
SMIM29-203ENST00000413013 MKRN1Q9UHC7 482 aaKnown RBP23.27■■□□□ 1.32
SMIM29-203ENST00000413013 KLRG2A4D1S0 409 aaPredicted RBP23.26■■□□□ 1.31
SMIM29-203ENST00000413013 FAM177BA6PVY3 158 aa23.26■■□□□ 1.31
SMIM29-203ENST00000413013 NBPF26B4DH59 902 aa23.26■■□□□ 1.31
SMIM29-203ENST00000413013 POTEIP0CG38 1075 aa23.26■■□□□ 1.31
SMIM29-203ENST00000413013 POTEJP0CG39 1038 aa23.26■■□□□ 1.31
SMIM29-203ENST00000413013 ALDH1B1P30837 517 aa23.26■■□□□ 1.31
SMIM29-203ENST00000413013 NBPF10Q6P3W6 841 aaKnown RBP23.26■■□□□ 1.31
SMIM29-203ENST00000413013 NBPF15Q8N660 670 aa23.26■■□□□ 1.31
SMIM29-203ENST00000413013 TAF7Q15545 349 aaPredicted RBP23.25■■□□□ 1.31
SMIM29-203ENST00000413013 NYXQ9GZU5 481 aa23.25■■□□□ 1.31
SMIM29-203ENST00000413013 TAF1DQ9H5J8 278 aaPredicted RBP23.25■■□□□ 1.31
SMIM29-203ENST00000413013 ZNF277Q9NRM2 450 aaPredicted RBP23.25■■□□□ 1.31
SMIM29-203ENST00000413013 ZNF316A6NFI3 1004 aaPredicted RBP23.24■■□□□ 1.31
SMIM29-203ENST00000413013 PNISRQ8TF01 805 aaKnown RBP23.24■■□□□ 1.31
SMIM29-203ENST00000413013 KDM3BQ7LBC6 1761 aa23.24■■□□□ 1.31
SMIM29-203ENST00000413013 EAPPQ56P03 285 aaPredicted RBP23.23■■□□□ 1.31
SMIM29-203ENST00000413013 HACL1Q9UJ83 578 aa23.23■■□□□ 1.31
SMIM29-203ENST00000413013 ZNF541Q9H0D2 1346 aa23.23■■□□□ 1.31
SMIM29-203ENST00000413013 CNTNAP1P78357 1384 aa23.23■■□□□ 1.31
SMIM29-203ENST00000413013 KIF6Q6ZMV9 814 aa23.22■■□□□ 1.31
SMIM29-203ENST00000413013 IARSP41252 1262 aaKnown RBP23.21■■□□□ 1.31
SMIM29-203ENST00000413013 HLFQ16534 295 aa23.21■■□□□ 1.31
SMIM29-203ENST00000413013 PASKQ96RG2 1323 aa23.21■■□□□ 1.31
SMIM29-203ENST00000413013 DLG5Q8TDM6 1919 aa23.2■■□□□ 1.3
SMIM29-203ENST00000413013 CLEC11AQ9Y240 323 aa23.2■■□□□ 1.3
SMIM29-203ENST00000413013 TMEM88BA6NKF7 163 aa23.19■■□□□ 1.3
SMIM29-203ENST00000413013 ERVV-1B6SEH8 477 aa23.19■■□□□ 1.3
SMIM29-203ENST00000413013 OLFM4Q6UX06 510 aa23.19■■□□□ 1.3
SMIM29-203ENST00000413013 PNMA8AQ86V59 439 aaPredicted RBP23.19■■□□□ 1.3
SMIM29-203ENST00000413013 JDP2Q8WYK2 163 aa23.19■■□□□ 1.3
SMIM29-203ENST00000413013 NUP98P52948 1817 aa23.19■■□□□ 1.3
SMIM29-203ENST00000413013 ADAMTSL1Q8N6G6 1762 aa23.19■■□□□ 1.3
SMIM29-203ENST00000413013 ABCC12Q96J65 1359 aa23.18■■□□□ 1.3
SMIM29-203ENST00000413013 IBTKQ9P2D0 1353 aaPredicted RBP23.18■■□□□ 1.3
SMIM29-203ENST00000413013 EPHX2P34913 555 aa23.18■■□□□ 1.3
SMIM29-203ENST00000413013 SYNE4Q8N205 404 aa23.18■■□□□ 1.3
SMIM29-203ENST00000413013 NGEFQ8N5V2 710 aa23.18■■□□□ 1.3
SMIM29-203ENST00000413013 RPGRQ92834 1020 aaKnown RBP23.18■■□□□ 1.3
SMIM29-203ENST00000413013 AIDAQ96BJ3 306 aa23.18■■□□□ 1.3
SMIM29-203ENST00000413013 PSMD1Q99460 953 aa23.18■■□□□ 1.3
SMIM29-203ENST00000413013 MIS18AQ9NYP9 233 aa23.18■■□□□ 1.3
SMIM29-203ENST00000413013 RIC1Q4ADV7 1423 aa23.17■■□□□ 1.3
SMIM29-203ENST00000413013 RNF123Q5XPI4 1314 aa23.17■■□□□ 1.3
SMIM29-203ENST00000413013 MAP3K15Q6ZN16 1313 aa23.17■■□□□ 1.3
SMIM29-203ENST00000413013 CRY2Q49AN0 593 aa23.17■■□□□ 1.3
SMIM29-203ENST00000413013 CC2D2BQ6DHV5 1058 aa23.17■■□□□ 1.3
SMIM29-203ENST00000413013 GPC2Q8N158 579 aa23.17■■□□□ 1.3
SMIM29-203ENST00000413013 FZD9O00144 591 aa23.16■■□□□ 1.3
SMIM29-203ENST00000413013 EIF6P56537 245 aaKnown RBP23.15■■□□□ 1.3
SMIM29-203ENST00000413013 GRIPAP1Q4V328 841 aa23.15■■□□□ 1.3
SMIM29-203ENST00000413013 NUTM1Q86Y26 1132 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms