RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 CALD1Q05682 793 aaKnown RBP17.1■□□□□ 0.33
SSB-203ENST00000413002 DUSP27Q5VZP5 1158 aa17.1■□□□□ 0.33
SSB-203ENST00000413002 TSR2Q969E8 191 aaKnown RBP17.1■□□□□ 0.33
SSB-203ENST00000413002 SETDB2Q96T68 719 aa17.1■□□□□ 0.33
SSB-203ENST00000413002 ZBTB3Q9H5J0 574 aa17.1■□□□□ 0.33
SSB-203ENST00000413002 CARMIL3Q8ND23 1372 aa17.1■□□□□ 0.33
SSB-203ENST00000413002 UTRNP46939 3433 aa17.09■□□□□ 0.33
SSB-203ENST00000413002 KCNA3P22001 575 aa17.09■□□□□ 0.33
SSB-203ENST00000413002 SCN7AQ01118 1682 aa17.09■□□□□ 0.33
SSB-203ENST00000413002 YY1P25490 414 aa17.08■□□□□ 0.32
SSB-203ENST00000413002 AIMP1Q12904 312 aaKnown RBP17.08■□□□□ 0.32
SSB-203ENST00000413002 HDGFL1Q5TGJ6 251 aa17.08■□□□□ 0.32
SSB-203ENST00000413002 PRR5LQ6MZQ0 368 aa17.08■□□□□ 0.32
SSB-203ENST00000413002 LRP10Q7Z4F1 713 aa17.08■□□□□ 0.32
SSB-203ENST00000413002 C8orf58Q8NAV2 365 aa17.08■□□□□ 0.32
SSB-203ENST00000413002 CHPF2Q9P2E5 772 aa17.08■□□□□ 0.32
SSB-203ENST00000413002 NIP7Q9Y221 180 aaKnown RBP eCLIP17.08■□□□□ 0.32
SSB-203ENST00000413002 BCS1LQ9Y276 419 aa17.08■□□□□ 0.32
SSB-203ENST00000413002 MAP3K15Q6ZN16 1313 aa17.07■□□□□ 0.32
SSB-203ENST00000413002 NPHP1O15259 732 aa17.07■□□□□ 0.32
SSB-203ENST00000413002 CCDC27Q2M243 656 aa17.07■□□□□ 0.32
SSB-203ENST00000413002 CLEC4GQ6UXB4 293 aa17.07■□□□□ 0.32
SSB-203ENST00000413002 KIF6Q6ZMV9 814 aa17.07■□□□□ 0.32
SSB-203ENST00000413002 ZNF652Q9Y2D9 606 aa17.07■□□□□ 0.32
SSB-203ENST00000413002 N4BP2Q86UW6 1770 aaPredicted RBP17.07■□□□□ 0.32
SSB-203ENST00000413002 ERBB4Q15303 1308 aa17.06■□□□□ 0.32
SSB-203ENST00000413002 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
SSB-203ENST00000413002 TSPYL6Q8N831 410 aa17.06■□□□□ 0.32
SSB-203ENST00000413002 XAGE3Q8WTP9 111 aa17.06■□□□□ 0.32
SSB-203ENST00000413002 KIAA1551Q9HCM1 1747 aa17.05■□□□□ 0.32
SSB-203ENST00000413002 GRIN3BO60391 1043 aa17.05■□□□□ 0.32
SSB-203ENST00000413002 GPTP24298 496 aa17.05■□□□□ 0.32
SSB-203ENST00000413002 NBPF5PQ86XG9 351 aaPredicted RBP17.05■□□□□ 0.32
SSB-203ENST00000413002 CNBD1Q8NA66 436 aa17.05■□□□□ 0.32
SSB-203ENST00000413002 AFDNP55196 1824 aaKnown RBP17.05■□□□□ 0.32
SSB-203ENST00000413002 BCORQ6W2J9 1755 aa17.05■□□□□ 0.32
SSB-203ENST00000413002 ERVV-1B6SEH8 477 aa17.04■□□□□ 0.32
SSB-203ENST00000413002 C2CD5Q86YS7 1000 aa17.04■□□□□ 0.32
SSB-203ENST00000413002 ZNF428Q96B54 188 aa17.04■□□□□ 0.32
SSB-203ENST00000413002 DDX21Q9NR30 783 aaKnown RBP eCLIP17.04■□□□□ 0.32
SSB-203ENST00000413002 KIF13BQ9NQT8 1826 aa17.04■□□□□ 0.32
SSB-203ENST00000413002 TCERG1O14776 1098 aaKnown RBP17.03■□□□□ 0.32
SSB-203ENST00000413002 HOXB7P09629 217 aa17.03■□□□□ 0.32
SSB-203ENST00000413002 DIEXFQ68CQ4 756 aaKnown RBP17.03■□□□□ 0.32
SSB-203ENST00000413002 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
SSB-203ENST00000413002 PIM2Q9P1W9 311 aa17.03■□□□□ 0.32
SSB-203ENST00000413002 NRXN2Q9P2S2 1712 aa17.01■□□□□ 0.31
SSB-203ENST00000413002 UBN2Q6ZU65 1347 aa17.01■□□□□ 0.31
SSB-203ENST00000413002 H0YIN7 160 aa17.01■□□□□ 0.31
SSB-203ENST00000413002 ST5P78524 1137 aa17.01■□□□□ 0.31
SSB-203ENST00000413002 DALRD3Q5D0E6 543 aaKnown RBP17.01■□□□□ 0.31
SSB-203ENST00000413002 GIGYF2Q6Y7W6 1299 aaKnown RBP17.01■□□□□ 0.31
SSB-203ENST00000413002 NUTM1Q86Y26 1132 aa17.01■□□□□ 0.31
SSB-203ENST00000413002 MIER1Q8N108 512 aa17.01■□□□□ 0.31
SSB-203ENST00000413002 BRIP1Q9BX63 1249 aa17.01■□□□□ 0.31
SSB-203ENST00000413002 DBF4Q9UBU7 674 aaPredicted RBP17.01■□□□□ 0.31
SSB-203ENST00000413002 IL16Q14005 1332 aa17■□□□□ 0.31
SSB-203ENST00000413002 SUSD4Q5VX71 490 aa17■□□□□ 0.31
SSB-203ENST00000413002 TPTE2Q6XPS3 522 aa17■□□□□ 0.31
SSB-203ENST00000413002 ARHGAP27Q6ZUM4 889 aa17■□□□□ 0.31
SSB-203ENST00000413002 WDR63Q8IWG1 891 aa17■□□□□ 0.31
SSB-203ENST00000413002 ZNF34Q8IZ26 560 aa17■□□□□ 0.31
SSB-203ENST00000413002 ZNF622Q969S3 477 aaKnown RBP eCLIP17■□□□□ 0.318e-13■□□□□ 8.7
SSB-203ENST00000413002 PHAXQ9H814 394 aaKnown RBP17■□□□□ 0.31
SSB-203ENST00000413002 FANCIQ9NVI1 1328 aa16.99■□□□□ 0.31
SSB-203ENST00000413002 CCER2I3L3R5 266 aa16.99■□□□□ 0.31
SSB-203ENST00000413002 RGL2O15211 777 aa16.99■□□□□ 0.31
SSB-203ENST00000413002 GTF2E1P29083 439 aaPredicted RBP16.99■□□□□ 0.31
SSB-203ENST00000413002 PDE6BP35913 854 aa16.99■□□□□ 0.31
SSB-203ENST00000413002 NCBP3Q53F19 620 aaKnown RBP16.99■□□□□ 0.31
SSB-203ENST00000413002 ZNF219Q9P2Y4 722 aaPredicted RBP16.99■□□□□ 0.31
SSB-203ENST00000413002 TWISTNBQ3B726 338 aaPredicted RBP16.98■□□□□ 0.31
SSB-203ENST00000413002 ERFEQ4G0M1 354 aa16.98■□□□□ 0.31
SSB-203ENST00000413002 HYPKQ9NX55 129 aa16.98■□□□□ 0.31
SSB-203ENST00000413002 ATP10DQ9P241 1426 aa16.97■□□□□ 0.31
SSB-203ENST00000413002 EXOSC9Q06265 439 aaKnown RBP16.97■□□□□ 0.31
SSB-203ENST00000413002 ANKRD13DQ6ZTN6 518 aa16.97■□□□□ 0.31
SSB-203ENST00000413002 TTLL6Q8N841 843 aa16.97■□□□□ 0.31
SSB-203ENST00000413002 CCDC30Q5VVM6 783 aa16.96■□□□□ 0.31
SSB-203ENST00000413002 ABCC12Q96J65 1359 aa16.96■□□□□ 0.31
SSB-203ENST00000413002 ANKRD31Q8N7Z5 1873 aa16.96■□□□□ 0.31
SSB-203ENST00000413002 NUP98P52948 1817 aa16.96■□□□□ 0.3
SSB-203ENST00000413002 ATP5J2-PTCD1G3V325 749 aa16.95■□□□□ 0.3
SSB-203ENST00000413002 NTSR2O95665 410 aa16.95■□□□□ 0.3
SSB-203ENST00000413002 SRGNP10124 158 aa16.95■□□□□ 0.3
SSB-203ENST00000413002 TCIRG1Q13488 830 aa16.95■□□□□ 0.3
SSB-203ENST00000413002 SYNE4Q8N205 404 aa16.95■□□□□ 0.3
SSB-203ENST00000413002 PLBD2Q8NHP8 589 aa16.95■□□□□ 0.3
SSB-203ENST00000413002 NYXQ9GZU5 481 aa16.95■□□□□ 0.3
SSB-203ENST00000413002 GOLGA2Q08379 1002 aa16.94■□□□□ 0.3
SSB-203ENST00000413002 ZNF784Q8NCA9 323 aaPredicted RBP16.94■□□□□ 0.3
SSB-203ENST00000413002 ZNF521Q96K83 1311 aa16.94■□□□□ 0.3
SSB-203ENST00000413002 BRCA1P38398 1863 aaKnown RBP16.93■□□□□ 0.3
SSB-203ENST00000413002 C21orf2O43822 256 aa16.93■□□□□ 0.3
SSB-203ENST00000413002 C1QBPQ07021 282 aaKnown RBP16.93■□□□□ 0.3
SSB-203ENST00000413002 C3orf67Q6ZVT6 689 aa16.93■□□□□ 0.3
SSB-203ENST00000413002 G2E3Q7L622 706 aa16.93■□□□□ 0.3
SSB-203ENST00000413002 PPP1R42Q7Z4L9 355 aa16.93■□□□□ 0.3
SSB-203ENST00000413002 RIC3Q7Z5B4 369 aa16.93■□□□□ 0.3
SSB-203ENST00000413002 NLRP10Q86W26 655 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms