RNA–Protein interactions for RNA: ENST00000412653.5

FAM3C-202, Transcript of family with sequence similarity 3 member C, humanhuman

TSL 4

Gene FAM3C, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-202ENST00000412653 TEX13AQ9BXU3 409 aaPredicted RBP22.52■■□□□ 1.2
FAM3C-202ENST00000412653 MKRN1Q9UHC7 482 aaKnown RBP22.52■■□□□ 1.2
FAM3C-202ENST00000412653 ZNF330Q9Y3S2 320 aaPredicted RBP22.52■■□□□ 1.2
FAM3C-202ENST00000412653 CNTNAP1P78357 1384 aa22.51■■□□□ 1.19
FAM3C-202ENST00000412653 TEFQ10587 303 aa22.51■■□□□ 1.19
FAM3C-202ENST00000412653 CC2D1BQ5T0F9 858 aaKnown RBP22.51■■□□□ 1.19
FAM3C-202ENST00000412653 CNKSR1Q969H4 720 aa22.5■■□□□ 1.19
FAM3C-202ENST00000412653 L3MBTL3Q96JM7 780 aaPredicted RBP22.5■■□□□ 1.19
FAM3C-202ENST00000412653 FMNL2Q96PY5 1086 aa22.5■■□□□ 1.19
FAM3C-202ENST00000412653 SETDB2Q96T68 719 aa22.5■■□□□ 1.19
FAM3C-202ENST00000412653 GAS2L2Q8NHY3 880 aa22.49■■□□□ 1.19
FAM3C-202ENST00000412653 MASTLQ96GX5 879 aa22.49■■□□□ 1.19
FAM3C-202ENST00000412653 PIP4K2AP48426 406 aaPredicted RBP22.48■■□□□ 1.19
FAM3C-202ENST00000412653 NPC1L1Q9UHC9 1359 aa22.48■■□□□ 1.19
FAM3C-202ENST00000412653 PRAMEF22A3QJZ6 481 aa22.47■■□□□ 1.19
FAM3C-202ENST00000412653 FOXN1O15353 648 aa22.47■■□□□ 1.19
FAM3C-202ENST00000412653 ST5P78524 1137 aa22.47■■□□□ 1.19
FAM3C-202ENST00000412653 DZIP3Q86Y13 1208 aaKnown RBP22.47■■□□□ 1.19
FAM3C-202ENST00000412653 PHACTR3Q96KR7 559 aa22.47■■□□□ 1.19
FAM3C-202ENST00000412653 TAF1DQ9H5J8 278 aaPredicted RBP22.47■■□□□ 1.19
FAM3C-202ENST00000412653 ZNF541Q9H0D2 1346 aa22.47■■□□□ 1.19
FAM3C-202ENST00000412653 SNED1Q8TER0 1413 aa22.47■■□□□ 1.19
FAM3C-202ENST00000412653 KLRG2A4D1S0 409 aaPredicted RBP22.46■■□□□ 1.19
FAM3C-202ENST00000412653 SOGA3Q5TF21 947 aa22.46■■□□□ 1.19
FAM3C-202ENST00000412653 USP16Q9Y5T5 823 aa22.46■■□□□ 1.19
FAM3C-202ENST00000412653 U2SURPO15042 1029 aaKnown RBP22.45■■□□□ 1.18
FAM3C-202ENST00000412653 ITGBL1O95965 494 aaPredicted RBP22.45■■□□□ 1.18
FAM3C-202ENST00000412653 LDHDQ86WU2 507 aa22.45■■□□□ 1.18
FAM3C-202ENST00000412653 LAMB4A4D0S4 1761 aa22.44■■□□□ 1.18
FAM3C-202ENST00000412653 OLFM4Q6UX06 510 aa22.44■■□□□ 1.18
FAM3C-202ENST00000412653 IQCA1LA6NCM1 817 aa22.43■■□□□ 1.18
FAM3C-202ENST00000412653 BTBD11A6QL63 1104 aa22.43■■□□□ 1.18
FAM3C-202ENST00000412653 CCDC93Q567U6 631 aa22.43■■□□□ 1.18
FAM3C-202ENST00000412653 RSPH6AQ9H0K4 717 aa22.43■■□□□ 1.18
FAM3C-202ENST00000412653 LTBP1Q14766 1721 aa22.43■■□□□ 1.18
FAM3C-202ENST00000412653 COL4A5P29400 1685 aa22.42■■□□□ 1.18
FAM3C-202ENST00000412653 CLEC4GQ6UXB4 293 aa22.42■■□□□ 1.18
FAM3C-202ENST00000412653 NBPF26B4DH59 902 aa22.41■■□□□ 1.18
FAM3C-202ENST00000412653 VEGFBP49765 207 aa22.41■■□□□ 1.18
FAM3C-202ENST00000412653 FKBP4Q02790 459 aaKnown RBP eCLIP22.41■■□□□ 1.18
FAM3C-202ENST00000412653 NBPF10Q6P3W6 841 aaKnown RBP22.41■■□□□ 1.18
FAM3C-202ENST00000412653 NBPF5PQ86XG9 351 aaPredicted RBP22.41■■□□□ 1.18
FAM3C-202ENST00000412653 NBPF15Q8N660 670 aa22.41■■□□□ 1.18
FAM3C-202ENST00000412653 ZNF277Q9NRM2 450 aaPredicted RBP22.41■■□□□ 1.18
FAM3C-202ENST00000412653 THSD7BQ9C0I4 1608 aa22.41■■□□□ 1.18
FAM3C-202ENST00000412653 NPHP1O15259 732 aa22.4■■□□□ 1.18
FAM3C-202ENST00000412653 NPR1P16066 1061 aa22.4■■□□□ 1.18
FAM3C-202ENST00000412653 PRKAR2BP31323 418 aa22.4■■□□□ 1.18
FAM3C-202ENST00000412653 PRDM10Q9NQV6 1147 aa22.4■■□□□ 1.18
FAM3C-202ENST00000412653 TMEM88BA6NKF7 163 aa22.38■■□□□ 1.17
FAM3C-202ENST00000412653 NUP98P52948 1817 aa22.37■■□□□ 1.17
FAM3C-202ENST00000412653 RGL2O15211 777 aa22.37■■□□□ 1.17
FAM3C-202ENST00000412653 KDM3BQ7LBC6 1761 aa22.36■■□□□ 1.17
FAM3C-202ENST00000412653 FZD9O00144 591 aa22.36■■□□□ 1.17
FAM3C-202ENST00000412653 NPM2Q86SE8 214 aaKnown RBP22.36■■□□□ 1.17
FAM3C-202ENST00000412653 WBP1LQ9NX94 342 aa22.36■■□□□ 1.17
FAM3C-202ENST00000412653 HACL1Q9UJ83 578 aa22.36■■□□□ 1.17
FAM3C-202ENST00000412653 ABCC12Q96J65 1359 aa22.36■■□□□ 1.17
FAM3C-202ENST00000412653 RNF123Q5XPI4 1314 aa22.35■■□□□ 1.17
FAM3C-202ENST00000412653 SNRPA1P09661 255 aaKnown RBP22.35■■□□□ 1.17
FAM3C-202ENST00000412653 EPHX2P34913 555 aa22.35■■□□□ 1.17
FAM3C-202ENST00000412653 EAPPQ56P03 285 aaPredicted RBP22.35■■□□□ 1.17
FAM3C-202ENST00000412653 MCM10Q7L590 875 aa22.35■■□□□ 1.17
FAM3C-202ENST00000412653 NIP7Q9Y221 180 aaKnown RBP eCLIP22.35■■□□□ 1.17
FAM3C-202ENST00000412653 ZNF652Q9Y2D9 606 aa22.35■■□□□ 1.17
FAM3C-202ENST00000412653 RASSF10A6NK89 507 aa22.34■■□□□ 1.17
FAM3C-202ENST00000412653 CTCFP49711 727 aaPredicted RBP22.34■■□□□ 1.17
FAM3C-202ENST00000412653 HLFQ16534 295 aa22.34■■□□□ 1.17
FAM3C-202ENST00000412653 IARSP41252 1262 aaKnown RBP22.33■■□□□ 1.17
FAM3C-202ENST00000412653 CNGB1Q14028 1251 aaPredicted RBP22.33■■□□□ 1.17
FAM3C-202ENST00000412653 TPTE2Q6XPS3 522 aa22.33■■□□□ 1.17
FAM3C-202ENST00000412653 RTKN2Q8IZC4 609 aa22.33■■□□□ 1.17
FAM3C-202ENST00000412653 DLG5Q8TDM6 1919 aa22.33■■□□□ 1.16
FAM3C-202ENST00000412653 CRY2Q49AN0 593 aa22.32■■□□□ 1.16
FAM3C-202ENST00000412653 MAP1SQ66K74 1059 aaPredicted RBP22.32■■□□□ 1.16
FAM3C-202ENST00000412653 SLC51AQ86UW1 340 aa22.32■■□□□ 1.16
FAM3C-202ENST00000412653 FAM177BA6PVY3 158 aa22.31■■□□□ 1.16
FAM3C-202ENST00000412653 LBX1P52954 281 aa22.31■■□□□ 1.16
FAM3C-202ENST00000412653 DCTN1Q14203 1278 aa22.31■■□□□ 1.16
FAM3C-202ENST00000412653 CNTROBQ8N137 903 aa22.31■■□□□ 1.16
FAM3C-202ENST00000412653 SYNE4Q8N205 404 aa22.31■■□□□ 1.16
FAM3C-202ENST00000412653 HSPA8P11142 646 aaKnown RBP22.3■■□□□ 1.16
FAM3C-202ENST00000412653 GPC2Q8N158 579 aa22.3■■□□□ 1.16
FAM3C-202ENST00000412653 CCER1Q8TC90 406 aaPredicted RBP22.3■■□□□ 1.16
FAM3C-202ENST00000412653 PSMD1Q99460 953 aa22.3■■□□□ 1.16
FAM3C-202ENST00000412653 RIC1Q4ADV7 1423 aa22.3■■□□□ 1.16
FAM3C-202ENST00000412653 TRPM7Q96QT4 1865 aa22.29■■□□□ 1.16
FAM3C-202ENST00000412653 PNMA8AQ86V59 439 aaPredicted RBP22.29■■□□□ 1.16
FAM3C-202ENST00000412653 AIDAQ96BJ3 306 aa22.29■■□□□ 1.16
FAM3C-202ENST00000412653 CLEC11AQ9Y240 323 aa22.29■■□□□ 1.16
FAM3C-202ENST00000412653 ALDH1B1P30837 517 aa22.28■■□□□ 1.16
FAM3C-202ENST00000412653 DEFB115Q30KQ5 88 aa22.27■■□□□ 1.16
FAM3C-202ENST00000412653 FMR1Q06787 632 aaKnown RBP eCLIP22.26■■□□□ 1.15
FAM3C-202ENST00000412653 NUTM1Q86Y26 1132 aa22.26■■□□□ 1.15
FAM3C-202ENST00000412653 WDR33Q9C0J8 1336 aaKnown RBP22.26■■□□□ 1.15
FAM3C-202ENST00000412653 SCNN1DP51172 638 aa22.25■■□□□ 1.15
FAM3C-202ENST00000412653 RTF1Q92541 710 aaKnown RBP22.25■■□□□ 1.15
FAM3C-202ENST00000412653 DDX21Q9NR30 783 aaKnown RBP eCLIP22.25■■□□□ 1.15
FAM3C-202ENST00000412653 UBN2Q6ZU65 1347 aa22.25■■□□□ 1.15
FAM3C-202ENST00000412653 IBTKQ9P2D0 1353 aaPredicted RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms