RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 GNAI3P08754 354 aa12.08□□□□□ -0.48
SMPD4-203ENST00000412570 CHD1LQ86WJ1 897 aa12.08□□□□□ -0.48
SMPD4-203ENST00000412570 GRM8O00222 908 aa12.07□□□□□ -0.48
SMPD4-203ENST00000412570 CCDC8Q9H0W5 538 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-203ENST00000412570 LMBR1LQ6UX01 489 aa12.07□□□□□ -0.48
SMPD4-203ENST00000412570 KRT27Q7Z3Y8 459 aa12.07□□□□□ -0.48
SMPD4-203ENST00000412570 AMIGO3Q86WK7 504 aa12.07□□□□□ -0.48
SMPD4-203ENST00000412570 TRMT112Q9UI30 125 aaKnown RBP12.07□□□□□ -0.48
SMPD4-203ENST00000412570 TAF7LQ5H9L4 462 aa12.07□□□□□ -0.48
SMPD4-203ENST00000412570 MSL1Q68DK7 614 aa12.07□□□□□ -0.48
SMPD4-203ENST00000412570 NEURL1BA8MQ27 555 aa12.06□□□□□ -0.48
SMPD4-203ENST00000412570 APBA3O96018 575 aa12.06□□□□□ -0.48
SMPD4-203ENST00000412570 HELBQ8NG08 1087 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-203ENST00000412570 NEUROD6Q96NK8 337 aa12.06□□□□□ -0.48
SMPD4-203ENST00000412570 RGS12O14924 1447 aa12.06□□□□□ -0.48
SMPD4-203ENST00000412570 SOS1Q07889 1333 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-203ENST00000412570 CYP19A1P11511 503 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-203ENST00000412570 POTEAQ6S8J7 498 aa12.06□□□□□ -0.48
SMPD4-203ENST00000412570 SNAP23O00161 211 aa12.06□□□□□ -0.48
SMPD4-203ENST00000412570 LINC00116Q8NCU8 138 aa12.06□□□□□ -0.48
SMPD4-203ENST00000412570 AHDC1Q5TGY3 1603 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-203ENST00000412570 GCKRQ14397 625 aa12.05□□□□□ -0.48
SMPD4-203ENST00000412570 NKX1-1Q15270 411 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-203ENST00000412570 FAM208AQ9UK61 1670 aaKnown RBP12.05□□□□□ -0.48
SMPD4-203ENST00000412570 HMMRO75330 724 aa12.05□□□□□ -0.48
SMPD4-203ENST00000412570 ANKRD44Q8N8A2 993 aa12.05□□□□□ -0.48
SMPD4-203ENST00000412570 LINS1Q8NG48 757 aa12.05□□□□□ -0.48
SMPD4-203ENST00000412570 METTL22Q9BUU2 404 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-203ENST00000412570 NIP7Q9Y221 180 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMPD4-203ENST00000412570 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-203ENST00000412570 RXRBP28702 533 aa12.04□□□□□ -0.48
SMPD4-203ENST00000412570 FAM196AQ6ZSG2 479 aa12.04□□□□□ -0.48
SMPD4-203ENST00000412570 KLHL34Q8N239 644 aa12.04□□□□□ -0.48
SMPD4-203ENST00000412570 CCDC87Q9NVE4 849 aa12.04□□□□□ -0.48
SMPD4-203ENST00000412570 THRAP3Q9Y2W1 955 aaKnown RBP12.04□□□□□ -0.48
SMPD4-203ENST00000412570 BCL11BQ9C0K0 894 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-203ENST00000412570 NCAPD2Q15021 1401 aa12.03□□□□□ -0.48
SMPD4-203ENST00000412570 USPL1Q5W0Q7 1092 aa12.03□□□□□ -0.48
SMPD4-203ENST00000412570 BABAM1Q9NWV8 329 aa12.03□□□□□ -0.48
SMPD4-203ENST00000412570 ZNF219Q9P2Y4 722 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-203ENST00000412570 PLBD2Q8NHP8 589 aa12.03□□□□□ -0.48
SMPD4-203ENST00000412570 CDCA7Q9BWT1 371 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-203ENST00000412570 CWC25Q9NXE8 425 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-203ENST00000412570 BARGINQ6ZT62 677 aa12.03□□□□□ -0.48
SMPD4-203ENST00000412570 SLC51AQ86UW1 340 aa12.03□□□□□ -0.48
SMPD4-203ENST00000412570 LMO7Q8WWI1 1683 aa12.02□□□□□ -0.48
SMPD4-203ENST00000412570 ABCA3Q99758 1704 aa12.02□□□□□ -0.48
SMPD4-203ENST00000412570 DEFB132Q7Z7B7 95 aa12.02□□□□□ -0.48
SMPD4-203ENST00000412570 AK7Q96M32 723 aa12.02□□□□□ -0.48
SMPD4-203ENST00000412570 PUS3Q9BZE2 481 aaKnown RBP12.02□□□□□ -0.48
SMPD4-203ENST00000412570 SLIT2O94813 1529 aa12.02□□□□□ -0.49
SMPD4-203ENST00000412570 HOXB7P09629 217 aa12.02□□□□□ -0.49
SMPD4-203ENST00000412570 G3BP1Q13283 466 aaKnown RBP eCLIP12.02□□□□□ -0.494e-7■□□□□ 10.4
SMPD4-203ENST00000412570 CHMP4BQ9H444 224 aaKnown RBP12.02□□□□□ -0.49
SMPD4-203ENST00000412570 LRRC4BQ9NT99 713 aa12.02□□□□□ -0.49
SMPD4-203ENST00000412570 BCL9O00512 1426 aa12.02□□□□□ -0.49
SMPD4-203ENST00000412570 AACSQ86V21 672 aa12.01□□□□□ -0.49
SMPD4-203ENST00000412570 EDC3Q96F86 508 aaKnown RBP12.01□□□□□ -0.49
SMPD4-203ENST00000412570 PPP1R1BQ9UD71 204 aaPredicted RBP12.01□□□□□ -0.49
SMPD4-203ENST00000412570 ATP8B2P98198 1209 aa12.01□□□□□ -0.49
SMPD4-203ENST00000412570 RPAP2Q8IXW5 612 aaPredicted RBP12.01□□□□□ -0.49
SMPD4-203ENST00000412570 KAZALD1Q96I82 304 aa12.01□□□□□ -0.49
SMPD4-203ENST00000412570 LRRCC1Q9C099 1032 aa12.01□□□□□ -0.49
SMPD4-203ENST00000412570 TFCP2L1Q9NZI6 479 aa12.01□□□□□ -0.49
SMPD4-203ENST00000412570 IQSEC3Q9UPP2 1182 aaPredicted RBP12.01□□□□□ -0.49
SMPD4-203ENST00000412570 HDAC1Q13547 482 aaPredicted RBP12.01□□□□□ -0.49
SMPD4-203ENST00000412570 BRPF1P55201 1214 aaPredicted RBP12□□□□□ -0.49
SMPD4-203ENST00000412570 NUCB1Q02818 461 aa12□□□□□ -0.49
SMPD4-203ENST00000412570 EN1Q05925 392 aaPredicted RBP12□□□□□ -0.49
SMPD4-203ENST00000412570 INTS5Q6P9B9 1019 aaKnown RBP12□□□□□ -0.49
SMPD4-203ENST00000412570 SNRKQ9NRH2 765 aa12□□□□□ -0.49
SMPD4-203ENST00000412570 TLR7Q9NYK1 1049 aaKnown RBP12□□□□□ -0.49
SMPD4-203ENST00000412570 CRYBG1Q9Y4K1 1723 aa12□□□□□ -0.49
SMPD4-203ENST00000412570 TNS2Q63HR2 1409 aa12□□□□□ -0.49
SMPD4-203ENST00000412570 ZPR1O75312 459 aa12□□□□□ -0.49
SMPD4-203ENST00000412570 LRRC24Q50LG9 513 aa12□□□□□ -0.49
SMPD4-203ENST00000412570 NOL8Q76FK4 1167 aaKnown RBP12□□□□□ -0.49
SMPD4-203ENST00000412570 COL14A1Q05707 1796 aaKnown RBP12□□□□□ -0.49
SMPD4-203ENST00000412570 RFC4P35249 363 aa12□□□□□ -0.49
SMPD4-203ENST00000412570 TIMM10P62072 90 aa12□□□□□ -0.49
SMPD4-203ENST00000412570 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
SMPD4-203ENST00000412570 DTNBO60941 627 aa11.99□□□□□ -0.49
SMPD4-203ENST00000412570 SMC5Q8IY18 1101 aa11.99□□□□□ -0.49
SMPD4-203ENST00000412570 DNAJC2Q99543 621 aaKnown RBP11.99□□□□□ -0.49
SMPD4-203ENST00000412570 JAG2Q9Y219 1238 aa11.99□□□□□ -0.49
SMPD4-203ENST00000412570 BOLA2Q9H3K6 86 aa11.99□□□□□ -0.49
SMPD4-203ENST00000412570 DCTPP1Q9H773 170 aa11.99□□□□□ -0.49
SMPD4-203ENST00000412570 SEC31BQ9NQW1 1179 aa11.99□□□□□ -0.49
SMPD4-203ENST00000412570 CHGBP05060 677 aa11.99□□□□□ -0.49
SMPD4-203ENST00000412570 IFIT2P09913 472 aaKnown RBP11.99□□□□□ -0.49
SMPD4-203ENST00000412570 SUSD4Q5VX71 490 aa11.99□□□□□ -0.49
SMPD4-203ENST00000412570 LRP10Q7Z4F1 713 aa11.99□□□□□ -0.49
SMPD4-203ENST00000412570 FOXD4L1Q9NU39 408 aa11.99□□□□□ -0.49
SMPD4-203ENST00000412570 DISP2A7MBM2 1401 aa11.98□□□□□ -0.49
SMPD4-203ENST00000412570 PLCH1Q4KWH8 1693 aa11.98□□□□□ -0.49
SMPD4-203ENST00000412570 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.98□□□□□ -0.49
SMPD4-203ENST00000412570 IRS4O14654 1257 aaPredicted RBP11.98□□□□□ -0.49
SMPD4-203ENST00000412570 TAF5LO75529 589 aa11.98□□□□□ -0.49
SMPD4-203ENST00000412570 RBM6P78332 1123 aaKnown RBP11.98□□□□□ -0.49
SMPD4-203ENST00000412570 RHPN1Q8TCX5 695 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms