RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 DBF4Q9UBU7 674 aaPredicted RBP18■□□□□ 0.47
CPNE1-206ENST00000412056 TCERG1O14776 1098 aaKnown RBP17.99■□□□□ 0.47
CPNE1-206ENST00000412056 VAMP4O75379 141 aa17.99■□□□□ 0.47
CPNE1-206ENST00000412056 DDR1Q08345 913 aa17.99■□□□□ 0.47
CPNE1-206ENST00000412056 CCDC30Q5VVM6 783 aa17.99■□□□□ 0.47
CPNE1-206ENST00000412056 XAGE3Q8WTP9 111 aa17.99■□□□□ 0.47
CPNE1-206ENST00000412056 MAP3K15Q6ZN16 1313 aa17.98■□□□□ 0.47
CPNE1-206ENST00000412056 AIMP1Q12904 312 aaKnown RBP17.98■□□□□ 0.47
CPNE1-206ENST00000412056 NFIXQ14938 502 aa17.98■□□□□ 0.47
CPNE1-206ENST00000412056 HLFQ16534 295 aa17.98■□□□□ 0.47
CPNE1-206ENST00000412056 TBC1D9BQ66K14 1250 aa17.98■□□□□ 0.47
CPNE1-206ENST00000412056 KIF6Q6ZMV9 814 aa17.98■□□□□ 0.47
CPNE1-206ENST00000412056 COPS6Q7L5N1 327 aa17.98■□□□□ 0.47
CPNE1-206ENST00000412056 TRMT2AQ8IZ69 625 aaKnown RBP17.98■□□□□ 0.47
CPNE1-206ENST00000412056 ZBTB3Q9H5J0 574 aa17.98■□□□□ 0.47
CPNE1-206ENST00000412056 TM4SF1P30408 202 aa17.97■□□□□ 0.47
CPNE1-206ENST00000412056 BICDL1Q6ZP65 573 aa17.97■□□□□ 0.47
CPNE1-206ENST00000412056 HYPKQ9NX55 129 aa17.97■□□□□ 0.47
CPNE1-206ENST00000412056 ZBED9Q6R2W3 1325 aa17.97■□□□□ 0.47
CPNE1-206ENST00000412056 POLRMTO00411 1230 aaKnown RBP17.96■□□□□ 0.47
CPNE1-206ENST00000412056 KLHL34Q8N239 644 aa17.96■□□□□ 0.47
CPNE1-206ENST00000412056 PHAXQ9H814 394 aaKnown RBP17.96■□□□□ 0.47
CPNE1-206ENST00000412056 PARP3Q9Y6F1 533 aa17.96■□□□□ 0.47
CPNE1-206ENST00000412056 KIAA1551Q9HCM1 1747 aa17.95■□□□□ 0.46
CPNE1-206ENST00000412056 ANKRD31Q8N7Z5 1873 aa17.95■□□□□ 0.46
CPNE1-206ENST00000412056 ERVV-1B6SEH8 477 aa17.95■□□□□ 0.46
CPNE1-206ENST00000412056 CLEC4GQ6UXB4 293 aa17.95■□□□□ 0.46
CPNE1-206ENST00000412056 STK31Q9BXU1 1019 aa17.95■□□□□ 0.46
CPNE1-206ENST00000412056 CHMP4AQ9BY43 222 aa17.95■□□□□ 0.46
CPNE1-206ENST00000412056 FHDC1Q9C0D6 1143 aaPredicted RBP17.95■□□□□ 0.46
CPNE1-206ENST00000412056 ZNF652Q9Y2D9 606 aa17.95■□□□□ 0.46
CPNE1-206ENST00000412056 N4BP2Q86UW6 1770 aaPredicted RBP17.94■□□□□ 0.46
CPNE1-206ENST00000412056 RGL2O15211 777 aa17.94■□□□□ 0.46
CPNE1-206ENST00000412056 C10orf71Q711Q0 1435 aa17.94■□□□□ 0.46
CPNE1-206ENST00000412056 ATP10DQ9P241 1426 aa17.93■□□□□ 0.46
CPNE1-206ENST00000412056 GIGYF2Q6Y7W6 1299 aaKnown RBP17.93■□□□□ 0.46
CPNE1-206ENST00000412056 CARMIL3Q8ND23 1372 aa17.92■□□□□ 0.46
CPNE1-206ENST00000412056 SERPINB2P05120 415 aa17.92■□□□□ 0.46
CPNE1-206ENST00000412056 G2E3Q7L622 706 aa17.92■□□□□ 0.46
CPNE1-206ENST00000412056 NIP7Q9Y221 180 aaKnown RBP eCLIP17.92■□□□□ 0.46
CPNE1-206ENST00000412056 SLC4A2P04920 1241 aa17.91■□□□□ 0.46
CPNE1-206ENST00000412056 PLBD2Q8NHP8 589 aa17.91■□□□□ 0.46
CPNE1-206ENST00000412056 SETDB2Q96T68 719 aa17.91■□□□□ 0.46
CPNE1-206ENST00000412056 GPTP24298 496 aa17.9■□□□□ 0.46
CPNE1-206ENST00000412056 ANKRD13DQ6ZTN6 518 aa17.9■□□□□ 0.46
CPNE1-206ENST00000412056 SYT17Q9BSW7 474 aa17.9■□□□□ 0.46
CPNE1-206ENST00000412056 UBN2Q6ZU65 1347 aa17.9■□□□□ 0.46
CPNE1-206ENST00000412056 BRCA1P38398 1863 aaKnown RBP17.9■□□□□ 0.46
CPNE1-206ENST00000412056 NLGN2Q8NFZ4 835 aa17.89■□□□□ 0.45
CPNE1-206ENST00000412056 DLEC1Q9Y238 1755 aa17.89■□□□□ 0.45
CPNE1-206ENST00000412056 FAM177BA6PVY3 158 aa17.88■□□□□ 0.45
CPNE1-206ENST00000412056 FLIIQ13045 1269 aa17.88■□□□□ 0.45
CPNE1-206ENST00000412056 ZNF34Q8IZ26 560 aa17.88■□□□□ 0.45
CPNE1-206ENST00000412056 CD2APQ9Y5K6 639 aa17.88■□□□□ 0.45
CPNE1-206ENST00000412056 COL11A2P13942 1736 aaPredicted RBP17.88■□□□□ 0.45
CPNE1-206ENST00000412056 ADCY9O60503 1353 aa17.88■□□□□ 0.45
CPNE1-206ENST00000412056 TNRC6CQ9HCJ0 1690 aaKnown RBP17.87■□□□□ 0.45
CPNE1-206ENST00000412056 TCIRG1Q13488 830 aa17.87■□□□□ 0.45
CPNE1-206ENST00000412056 PRR5LQ6MZQ0 368 aa17.87■□□□□ 0.45
CPNE1-206ENST00000412056 RIC3Q7Z5B4 369 aa17.87■□□□□ 0.45
CPNE1-206ENST00000412056 CCDC24Q8N4L8 307 aa17.87■□□□□ 0.45
CPNE1-206ENST00000412056 PXDNLA1KZ92 1463 aa17.87■□□□□ 0.45
CPNE1-206ENST00000412056 CACNA1SQ13698 1873 aa17.86■□□□□ 0.45
CPNE1-206ENST00000412056 DDX58O95786 925 aaKnown RBP17.86■□□□□ 0.45
CPNE1-206ENST00000412056 HSP90AB3PQ58FF7 597 aa17.86■□□□□ 0.45
CPNE1-206ENST00000412056 NBPF5PQ86XG9 351 aaPredicted RBP17.86■□□□□ 0.45
CPNE1-206ENST00000412056 CNBD1Q8NA66 436 aa17.86■□□□□ 0.45
CPNE1-206ENST00000412056 SSH1Q8WYL5 1049 aa17.86■□□□□ 0.45
CPNE1-206ENST00000412056 BCL2L13Q9BXK5 485 aa17.86■□□□□ 0.45
CPNE1-206ENST00000412056 LAMB2P55268 1798 aa17.86■□□□□ 0.45
CPNE1-206ENST00000412056 CT47B1P0C2W7 299 aaPredicted RBP17.85■□□□□ 0.45
CPNE1-206ENST00000412056 SUSD4Q5VX71 490 aa17.85■□□□□ 0.45
CPNE1-206ENST00000412056 KSR2Q6VAB6 950 aa17.85■□□□□ 0.45
CPNE1-206ENST00000412056 MRPL50Q8N5N7 158 aaKnown RBP17.85■□□□□ 0.45
CPNE1-206ENST00000412056 IBTKQ9P2D0 1353 aaPredicted RBP17.85■□□□□ 0.45
CPNE1-206ENST00000412056 MAP3K2Q9Y2U5 619 aa17.85■□□□□ 0.45
CPNE1-206ENST00000412056 ABCC12Q96J65 1359 aa17.84■□□□□ 0.45
CPNE1-206ENST00000412056 PI4KAP2A4QPH2 592 aa17.84■□□□□ 0.45
CPNE1-206ENST00000412056 ATP5J2-PTCD1G3V325 749 aa17.84■□□□□ 0.45
CPNE1-206ENST00000412056 NPHP1O15259 732 aa17.84■□□□□ 0.45
CPNE1-206ENST00000412056 FKBP5Q13451 457 aaPredicted RBP17.84■□□□□ 0.45
CPNE1-206ENST00000412056 PI4KAP1Q8N8J0 262 aa17.84■□□□□ 0.45
CPNE1-206ENST00000412056 ZNF428Q96B54 188 aa17.84■□□□□ 0.45
CPNE1-206ENST00000412056 DDX60Q8IY21 1712 aaKnown RBP17.84■□□□□ 0.45
CPNE1-206ENST00000412056 NTSR2O95665 410 aa17.83■□□□□ 0.44
CPNE1-206ENST00000412056 PARP10Q53GL7 1025 aa17.83■□□□□ 0.44
CPNE1-206ENST00000412056 NLRP10Q86W26 655 aa17.83■□□□□ 0.44
CPNE1-206ENST00000412056 NUTM1Q86Y26 1132 aa17.83■□□□□ 0.44
CPNE1-206ENST00000412056 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.44
CPNE1-206ENST00000412056 MYD88Q99836 296 aa17.83■□□□□ 0.44
CPNE1-206ENST00000412056 ISCA1Q9BUE6 129 aa17.83■□□□□ 0.44
CPNE1-206ENST00000412056 METTL22Q9BUU2 404 aaPredicted RBP17.83■□□□□ 0.44
CPNE1-206ENST00000412056 ST5P78524 1137 aa17.82■□□□□ 0.44
CPNE1-206ENST00000412056 ALDH1L2Q3SY69 923 aa17.82■□□□□ 0.44
CPNE1-206ENST00000412056 TPTE2Q6XPS3 522 aa17.82■□□□□ 0.44
CPNE1-206ENST00000412056 NYXQ9GZU5 481 aa17.82■□□□□ 0.44
CPNE1-206ENST00000412056 SMC4Q9NTJ3 1288 aa17.82■□□□□ 0.44
CPNE1-206ENST00000412056 A0A0G2JLW4 131 aa17.81■□□□□ 0.44
CPNE1-206ENST00000412056 DPEP1P16444 411 aa17.81■□□□□ 0.44
CPNE1-206ENST00000412056 TGFB2P61812 414 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms