RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 TSPYL4Q9UJ04 414 aa13.24□□□□□ -0.29
PKP4-203ENST00000411900 MYL6BP14649 208 aa13.23□□□□□ -0.29
PKP4-203ENST00000411900 WDR43Q15061 677 aaKnown RBP eCLIP13.23□□□□□ -0.29
PKP4-203ENST00000411900 TTLL6Q8N841 843 aa13.23□□□□□ -0.29
PKP4-203ENST00000411900 RNF181Q9P0P0 153 aa13.23□□□□□ -0.29
PKP4-203ENST00000411900 NUP98P52948 1817 aa13.23□□□□□ -0.29
PKP4-203ENST00000411900 ST5P78524 1137 aa13.22□□□□□ -0.29
PKP4-203ENST00000411900 HLFQ16534 295 aa13.22□□□□□ -0.29
PKP4-203ENST00000411900 NBPF5PQ86XG9 351 aaPredicted RBP13.22□□□□□ -0.29
PKP4-203ENST00000411900 BRIP1Q9BX63 1249 aa13.22□□□□□ -0.29
PKP4-203ENST00000411900 PRKRIP1Q9H875 184 aaPredicted RBP13.22□□□□□ -0.29
PKP4-203ENST00000411900 ZNF652Q9Y2D9 606 aa13.22□□□□□ -0.29
PKP4-203ENST00000411900 PDE6BP35913 854 aa13.21□□□□□ -0.29
PKP4-203ENST00000411900 ADAMTS8Q9UP79 889 aa13.21□□□□□ -0.29
PKP4-203ENST00000411900 NIP7Q9Y221 180 aaKnown RBP eCLIP13.21□□□□□ -0.29
PKP4-203ENST00000411900 SLX4Q8IY92 1834 aa13.2□□□□□ -0.3
PKP4-203ENST00000411900 KIF3CO14782 793 aa13.2□□□□□ -0.3
PKP4-203ENST00000411900 EIF2S2P20042 333 aaKnown RBP13.2□□□□□ -0.3
PKP4-203ENST00000411900 CLEC4GQ6UXB4 293 aa13.2□□□□□ -0.3
PKP4-203ENST00000411900 TTLL7Q6ZT98 887 aa13.2□□□□□ -0.3
PKP4-203ENST00000411900 NECTIN2Q92692 538 aa13.2□□□□□ -0.3
PKP4-203ENST00000411900 RUNDC1Q96C34 613 aa13.2□□□□□ -0.3
PKP4-203ENST00000411900 NMRK2Q9NPI5 230 aa13.2□□□□□ -0.3
PKP4-203ENST00000411900 LAS1LQ9Y4W2 734 aaKnown RBP13.2□□□□□ -0.3
PKP4-203ENST00000411900 TIAM2Q8IVF5 1701 aa13.19□□□□□ -0.3
PKP4-203ENST00000411900 C21orf2O43822 256 aa13.19□□□□□ -0.3
PKP4-203ENST00000411900 PRELPP51888 382 aa13.19□□□□□ -0.3
PKP4-203ENST00000411900 LMOD3Q0VAK6 560 aa13.19□□□□□ -0.3
PKP4-203ENST00000411900 ZBTB3Q9H5J0 574 aa13.19□□□□□ -0.3
PKP4-203ENST00000411900 ARFGEF2Q9Y6D5 1785 aa13.19□□□□□ -0.3
PKP4-203ENST00000411900 ANXA1P04083 346 aa13.18□□□□□ -0.3
PKP4-203ENST00000411900 KRT24Q2M2I5 525 aa13.18□□□□□ -0.3
PKP4-203ENST00000411900 KIF6Q6ZMV9 814 aa13.18□□□□□ -0.3
PKP4-203ENST00000411900 FER1L6Q2WGJ9 1857 aa13.18□□□□□ -0.3
PKP4-203ENST00000411900 TNRC6CQ9HCJ0 1690 aaKnown RBP13.18□□□□□ -0.3
PKP4-203ENST00000411900 MAP3K15Q6ZN16 1313 aa13.17□□□□□ -0.3
PKP4-203ENST00000411900 NFKBIEO00221 500 aa13.17□□□□□ -0.3
PKP4-203ENST00000411900 SRGNP10124 158 aa13.17□□□□□ -0.3
PKP4-203ENST00000411900 GPTP24298 496 aa13.17□□□□□ -0.3
PKP4-203ENST00000411900 GTF2E1P29083 439 aaPredicted RBP13.17□□□□□ -0.3
PKP4-203ENST00000411900 TPTE2Q6XPS3 522 aa13.17□□□□□ -0.3
PKP4-203ENST00000411900 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
PKP4-203ENST00000411900 LMNB1P20700 586 aa13.16□□□□□ -0.3
PKP4-203ENST00000411900 PROSER3Q2NL68 480 aa13.16□□□□□ -0.3
PKP4-203ENST00000411900 STYK1Q6J9G0 422 aa13.16□□□□□ -0.3
PKP4-203ENST00000411900 PRPF40BQ6NWY9 871 aaKnown RBP13.16□□□□□ -0.3
PKP4-203ENST00000411900 NUTM1Q86Y26 1132 aa13.16□□□□□ -0.3
PKP4-203ENST00000411900 MASTLQ96GX5 879 aa13.16□□□□□ -0.3
PKP4-203ENST00000411900 PDZRN3Q9UPQ7 1066 aa13.16□□□□□ -0.3
PKP4-203ENST00000411900 CNKSR1Q969H4 720 aa13.15□□□□□ -0.3
PKP4-203ENST00000411900 RRAGCQ9HB90 399 aa13.15□□□□□ -0.3
PKP4-203ENST00000411900 ABCC12Q96J65 1359 aa13.15□□□□□ -0.3
PKP4-203ENST00000411900 DICER1Q9UPY3 1922 aaKnown RBP13.15□□□□□ -0.3
PKP4-203ENST00000411900 UBN2Q6ZU65 1347 aa13.14□□□□□ -0.31
PKP4-203ENST00000411900 KDM2BQ8NHM5 1336 aa13.14□□□□□ -0.31
PKP4-203ENST00000411900 ERVV-1B6SEH8 477 aa13.14□□□□□ -0.31
PKP4-203ENST00000411900 AIMP1Q12904 312 aaKnown RBP13.14□□□□□ -0.31
PKP4-203ENST00000411900 PDIA6Q15084 440 aa13.14□□□□□ -0.31
PKP4-203ENST00000411900 ERFEQ4G0M1 354 aa13.14□□□□□ -0.31
PKP4-203ENST00000411900 CCDC184Q52MB2 194 aa13.14□□□□□ -0.31
PKP4-203ENST00000411900 BABAM1Q9NWV8 329 aa13.14□□□□□ -0.31
PKP4-203ENST00000411900 ERBB4Q15303 1308 aa13.13□□□□□ -0.31
PKP4-203ENST00000411900 ANKRD36CQ5JPF3 1778 aa13.13□□□□□ -0.31
PKP4-203ENST00000411900 CHL1O00533 1208 aa13.13□□□□□ -0.31
PKP4-203ENST00000411900 APAF1O14727 1248 aa13.13□□□□□ -0.31
PKP4-203ENST00000411900 RGL2O15211 777 aa13.13□□□□□ -0.31
PKP4-203ENST00000411900 SUSD4Q5VX71 490 aa13.13□□□□□ -0.31
PKP4-203ENST00000411900 OLFM4Q6UX06 510 aa13.13□□□□□ -0.31
PKP4-203ENST00000411900 LRP10Q7Z4F1 713 aa13.13□□□□□ -0.31
PKP4-203ENST00000411900 C16orf71Q8IYS4 520 aaPredicted RBP13.13□□□□□ -0.31
PKP4-203ENST00000411900 TOMM70O94826 608 aa13.12□□□□□ -0.31
PKP4-203ENST00000411900 NPR1P16066 1061 aa13.12□□□□□ -0.31
PKP4-203ENST00000411900 HSPA6P17066 643 aa13.12□□□□□ -0.31
PKP4-203ENST00000411900 ZNF428Q96B54 188 aa13.12□□□□□ -0.31
PKP4-203ENST00000411900 NYXQ9GZU5 481 aa13.12□□□□□ -0.31
PKP4-203ENST00000411900 TAOK3Q9H2K8 898 aa13.12□□□□□ -0.31
PKP4-203ENST00000411900 CEP350Q5VT06 3117 aa13.12□□□□□ -0.31
PKP4-203ENST00000411900 DIEXFQ68CQ4 756 aaKnown RBP13.11□□□□□ -0.31
PKP4-203ENST00000411900 GIGYF2Q6Y7W6 1299 aaKnown RBP13.11□□□□□ -0.31
PKP4-203ENST00000411900 COPS6Q7L5N1 327 aa13.11□□□□□ -0.31
PKP4-203ENST00000411900 ZNF34Q8IZ26 560 aa13.11□□□□□ -0.31
PKP4-203ENST00000411900 XAGE3Q8WTP9 111 aa13.11□□□□□ -0.31
PKP4-203ENST00000411900 KLRG2A4D1S0 409 aaPredicted RBP13.1□□□□□ -0.31
PKP4-203ENST00000411900 NTSR2O95665 410 aa13.1□□□□□ -0.31
PKP4-203ENST00000411900 MBIPQ9NS73 344 aa13.1□□□□□ -0.31
PKP4-203ENST00000411900 CHPF2Q9P2E5 772 aa13.1□□□□□ -0.31
PKP4-203ENST00000411900 GLTPD2A6NH11 291 aa13.09□□□□□ -0.31
PKP4-203ENST00000411900 CCDC93Q567U6 631 aa13.09□□□□□ -0.31
PKP4-203ENST00000411900 SOGA3Q5TF21 947 aa13.09□□□□□ -0.31
PKP4-203ENST00000411900 HDGFL1Q5TGJ6 251 aa13.09□□□□□ -0.31
PKP4-203ENST00000411900 C3orf67Q6ZVT6 689 aa13.09□□□□□ -0.31
PKP4-203ENST00000411900 SLC51AQ86UW1 340 aa13.09□□□□□ -0.31
PKP4-203ENST00000411900 C7orf43Q8WVR3 580 aa13.09□□□□□ -0.31
PKP4-203ENST00000411900 CFAP44Q96MT7 982 aa13.09□□□□□ -0.31
PKP4-203ENST00000411900 DDX21Q9NR30 783 aaKnown RBP eCLIP13.09□□□□□ -0.31
PKP4-203ENST00000411900 LAMB2P55268 1798 aa13.09□□□□□ -0.31
PKP4-203ENST00000411900 ZC3H4Q9UPT8 1303 aaKnown RBP13.09□□□□□ -0.31
PKP4-203ENST00000411900 ELL2O00472 640 aaPredicted RBP13.08□□□□□ -0.32
PKP4-203ENST00000411900 TCERG1O14776 1098 aaKnown RBP13.08□□□□□ -0.32
PKP4-203ENST00000411900 DUSP27Q5VZP5 1158 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms