RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 DZIP1LQ8IYY4 767 aaKnown RBP23.67■■□□□ 1.38
CDC42-204ENST00000411827 CHMP4BQ9H444 224 aaKnown RBP23.67■■□□□ 1.38
CDC42-204ENST00000411827 TFCP2L1Q9NZI6 479 aa23.67■■□□□ 1.38
CDC42-204ENST00000411827 ZNF330Q9Y3S2 320 aaPredicted RBP23.67■■□□□ 1.38
CDC42-204ENST00000411827 MYH14Q7Z406 1995 aaKnown RBP23.67■■□□□ 1.38
CDC42-204ENST00000411827 IBTKQ9P2D0 1353 aaPredicted RBP23.66■■□□□ 1.38
CDC42-204ENST00000411827 PI4KAP2A4QPH2 592 aa23.66■■□□□ 1.38
CDC42-204ENST00000411827 CCT4P50991 539 aaKnown RBP23.66■■□□□ 1.38
CDC42-204ENST00000411827 NEXNQ0ZGT2 675 aa23.66■■□□□ 1.38
CDC42-204ENST00000411827 CLEC4GQ6UXB4 293 aa23.66■■□□□ 1.38
CDC42-204ENST00000411827 PI4KAP1Q8N8J0 262 aa23.66■■□□□ 1.38
CDC42-204ENST00000411827 DNAAF4Q8WXU2 420 aa23.66■■□□□ 1.38
CDC42-204ENST00000411827 PXDNLA1KZ92 1463 aa23.65■■□□□ 1.38
CDC42-204ENST00000411827 RFC4P35249 363 aa23.65■■□□□ 1.38
CDC42-204ENST00000411827 PIP4K2AP48426 406 aaPredicted RBP23.65■■□□□ 1.38
CDC42-204ENST00000411827 NARFQ9UHQ1 456 aa23.65■■□□□ 1.38
CDC42-204ENST00000411827 ABCC4O15439 1325 aa23.64■■□□□ 1.38
CDC42-204ENST00000411827 ZPR1O75312 459 aa23.64■■□□□ 1.37
CDC42-204ENST00000411827 SLC15A2Q16348 729 aa23.64■■□□□ 1.37
CDC42-204ENST00000411827 MAP3K2Q9Y2U5 619 aa23.64■■□□□ 1.37
CDC42-204ENST00000411827 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.63■■□□□ 1.37
CDC42-204ENST00000411827 NEFLP07196 543 aa23.63■■□□□ 1.37
CDC42-204ENST00000411827 INTS3Q68E01 1043 aaKnown RBP23.63■■□□□ 1.37
CDC42-204ENST00000411827 GIGYF2Q6Y7W6 1299 aaKnown RBP23.63■■□□□ 1.37
CDC42-204ENST00000411827 TTLL7Q6ZT98 887 aa23.63■■□□□ 1.37
CDC42-204ENST00000411827 ARXQ96QS3 562 aa23.63■■□□□ 1.37
CDC42-204ENST00000411827 METTL22Q9BUU2 404 aaPredicted RBP23.63■■□□□ 1.37
CDC42-204ENST00000411827 ATP10DQ9P241 1426 aa23.62■■□□□ 1.37
CDC42-204ENST00000411827 AAMPQ13685 434 aa23.62■■□□□ 1.37
CDC42-204ENST00000411827 LINS1Q8NG48 757 aa23.62■■□□□ 1.37
CDC42-204ENST00000411827 ARHGEF1Q92888 912 aaKnown RBP23.62■■□□□ 1.37
CDC42-204ENST00000411827 ADCY9O60503 1353 aa23.62■■□□□ 1.37
CDC42-204ENST00000411827 ALDH1L1O75891 902 aa23.61■■□□□ 1.37
CDC42-204ENST00000411827 TRIM28Q13263 835 aaKnown RBP23.61■■□□□ 1.37
CDC42-204ENST00000411827 PLIN1O60240 522 aa23.6■■□□□ 1.37
CDC42-204ENST00000411827 CAMTA2O94983 1202 aa23.6■■□□□ 1.37
CDC42-204ENST00000411827 TCIRG1Q13488 830 aa23.6■■□□□ 1.37
CDC42-204ENST00000411827 ZNF827Q17R98 1081 aa23.6■■□□□ 1.37
CDC42-204ENST00000411827 TBC1D2BQ9UPU7 963 aa23.6■■□□□ 1.37
CDC42-204ENST00000411827 HDAC5Q9UQL6 1122 aa23.6■■□□□ 1.37
CDC42-204ENST00000411827 UBR3Q6ZT12 1888 aa23.6■■□□□ 1.37
CDC42-204ENST00000411827 NUP188Q5SRE5 1749 aa23.59■■□□□ 1.37
CDC42-204ENST00000411827 SLC4A10Q6U841 1118 aa23.59■■□□□ 1.37
CDC42-204ENST00000411827 SRCIN1Q9C0H9 1055 aa23.59■■□□□ 1.37
CDC42-204ENST00000411827 ZBTB3Q9H5J0 574 aa23.59■■□□□ 1.37
CDC42-204ENST00000411827 USP42Q9H9J4 1324 aaKnown RBP23.59■■□□□ 1.37
CDC42-204ENST00000411827 CLUAP1Q96AJ1 413 aa23.58■■□□□ 1.37
CDC42-204ENST00000411827 DDX19BQ9UMR2 479 aa23.58■■□□□ 1.37
CDC42-204ENST00000411827 F6X3S4 739 aa23.57■■□□□ 1.36
CDC42-204ENST00000411827 BEND3Q5T5X7 828 aa23.57■■□□□ 1.36
CDC42-204ENST00000411827 CCDC191Q8NCU4 936 aa23.57■■□□□ 1.36
CDC42-204ENST00000411827 PHF14O94880 888 aa23.56■■□□□ 1.36
CDC42-204ENST00000411827 MVPQ14764 893 aaKnown RBP23.56■■□□□ 1.36
CDC42-204ENST00000411827 PARP10Q53GL7 1025 aa23.56■■□□□ 1.36
CDC42-204ENST00000411827 QSER1Q2KHR3 1735 aa23.56■■□□□ 1.36
CDC42-204ENST00000411827 ERICH6BQ5W0A0 696 aa23.55■■□□□ 1.36
CDC42-204ENST00000411827 NLGN1Q8N2Q7 840 aa23.55■■□□□ 1.36
CDC42-204ENST00000411827 SLC16A10Q8TF71 515 aa23.55■■□□□ 1.36
CDC42-204ENST00000411827 ITPRIPQ8IWB1 547 aa23.54■■□□□ 1.36
CDC42-204ENST00000411827 TMEM57Q8N5G2 664 aa23.54■■□□□ 1.36
CDC42-204ENST00000411827 PANK1Q8TE04 598 aa23.54■■□□□ 1.36
CDC42-204ENST00000411827 MYD88Q99836 296 aa23.54■■□□□ 1.36
CDC42-204ENST00000411827 ISCA1Q9BUE6 129 aa23.54■■□□□ 1.36
CDC42-204ENST00000411827 ANO8Q9HCE9 1232 aaPredicted RBP23.54■■□□□ 1.36
CDC42-204ENST00000411827 PNPLA7Q6ZV29 1317 aa23.54■■□□□ 1.36
CDC42-204ENST00000411827 RLBP1P12271 317 aa23.53■■□□□ 1.36
CDC42-204ENST00000411827 USPL1Q5W0Q7 1092 aa23.53■■□□□ 1.36
CDC42-204ENST00000411827 ZNF34Q8IZ26 560 aa23.53■■□□□ 1.36
CDC42-204ENST00000411827 CWC25Q9NXE8 425 aaPredicted RBP23.53■■□□□ 1.36
CDC42-204ENST00000411827 ARFGEF2Q9Y6D5 1785 aa23.52■■□□□ 1.36
CDC42-204ENST00000411827 NEURL1BA8MQ27 555 aa23.52■■□□□ 1.36
CDC42-204ENST00000411827 GNAI3P08754 354 aa23.52■■□□□ 1.36
CDC42-204ENST00000411827 HSP90B1P14625 803 aaKnown RBP23.52■■□□□ 1.36
CDC42-204ENST00000411827 HLFQ16534 295 aa23.52■■□□□ 1.36
CDC42-204ENST00000411827 AMIGO3Q86WK7 504 aa23.52■■□□□ 1.36
CDC42-204ENST00000411827 COL23A1Q86Y22 540 aaPredicted RBP23.52■■□□□ 1.36
CDC42-204ENST00000411827 SCN7AQ01118 1682 aa23.51■■□□□ 1.35
CDC42-204ENST00000411827 BCORQ6W2J9 1755 aa23.5■■□□□ 1.35
CDC42-204ENST00000411827 MSH5O43196 834 aa23.5■■□□□ 1.35
CDC42-204ENST00000411827 IGKV5-2P06315 115 aa23.5■■□□□ 1.35
CDC42-204ENST00000411827 GCKRQ14397 625 aa23.5■■□□□ 1.35
CDC42-204ENST00000411827 C20orf194Q5TEA3 1177 aa23.5■■□□□ 1.35
CDC42-204ENST00000411827 PPP1R42Q7Z4L9 355 aa23.5■■□□□ 1.35
CDC42-204ENST00000411827 SETDB2Q96T68 719 aa23.5■■□□□ 1.35
CDC42-204ENST00000411827 COG6Q9Y2V7 657 aa23.5■■□□□ 1.35
CDC42-204ENST00000411827 N4BP2Q86UW6 1770 aaPredicted RBP23.5■■□□□ 1.35
CDC42-204ENST00000411827 GYS1P13807 737 aa23.49■■□□□ 1.35
CDC42-204ENST00000411827 BCL2L12Q9HB09 334 aa23.49■■□□□ 1.35
CDC42-204ENST00000411827 C9orf78Q9NZ63 289 aaPredicted RBP23.49■■□□□ 1.35
CDC42-204ENST00000411827 SRP68Q9UHB9 627 aaKnown RBP23.49■■□□□ 1.35
CDC42-204ENST00000411827 NIP7Q9Y221 180 aaKnown RBP eCLIP23.49■■□□□ 1.35
CDC42-204ENST00000411827 C4AP0C0L4 1744 aa23.49■■□□□ 1.35
CDC42-204ENST00000411827 NLRP10Q86W26 655 aa23.48■■□□□ 1.35
CDC42-204ENST00000411827 NYXQ9GZU5 481 aa23.48■■□□□ 1.35
CDC42-204ENST00000411827 TNNQ9UQP3 1299 aa23.48■■□□□ 1.35
CDC42-204ENST00000411827 UTYO14607 1347 aa23.48■■□□□ 1.35
CDC42-204ENST00000411827 NUP98P52948 1817 aa23.47■■□□□ 1.35
CDC42-204ENST00000411827 ATP5J2-PTCD1G3V325 749 aa23.47■■□□□ 1.35
CDC42-204ENST00000411827 GRM8O00222 908 aa23.47■■□□□ 1.35
CDC42-204ENST00000411827 ZBTB7BO15156 539 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 1203.7 ms