RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 UBR3Q6ZT12 1888 aa9.14□□□□□ -0.95
LINC00396-201ENST00000411690 GLTPD2A6NH11 291 aa9.13□□□□□ -0.95
LINC00396-201ENST00000411690 RGS19P49795 217 aa9.13□□□□□ -0.95
LINC00396-201ENST00000411690 BCAMP50895 628 aa9.13□□□□□ -0.95
LINC00396-201ENST00000411690 TMF1P82094 1093 aa9.13□□□□□ -0.95
LINC00396-201ENST00000411690 DALRD3Q5D0E6 543 aaKnown RBP9.13□□□□□ -0.95
LINC00396-201ENST00000411690 ZDHHC16Q969W1 377 aa9.13□□□□□ -0.95
LINC00396-201ENST00000411690 DCAF5Q96JK2 942 aa9.13□□□□□ -0.95
LINC00396-201ENST00000411690 KIAA1210Q9ULL0 1709 aa9.13□□□□□ -0.95
LINC00396-201ENST00000411690 ZC3H4Q9UPT8 1303 aaKnown RBP9.12□□□□□ -0.95
LINC00396-201ENST00000411690 MEGF6O75095 1541 aa9.12□□□□□ -0.95
LINC00396-201ENST00000411690 CCDC85CA6NKD9 419 aa9.12□□□□□ -0.95
LINC00396-201ENST00000411690 LCE2BO14633 110 aa9.12□□□□□ -0.95
LINC00396-201ENST00000411690 EVI5O60447 810 aa9.12□□□□□ -0.95
LINC00396-201ENST00000411690 PROX2Q3B8N5 592 aa9.12□□□□□ -0.95
LINC00396-201ENST00000411690 LINC00116Q8NCU8 138 aa9.12□□□□□ -0.95
LINC00396-201ENST00000411690 PARP3Q9Y6F1 533 aa9.12□□□□□ -0.95
LINC00396-201ENST00000411690 FAM208AQ9UK61 1670 aaKnown RBP9.12□□□□□ -0.95
LINC00396-201ENST00000411690 CGNL1Q0VF96 1302 aa9.11□□□□□ -0.95
LINC00396-201ENST00000411690 ARFGEF1Q9Y6D6 1849 aa9.11□□□□□ -0.95
LINC00396-201ENST00000411690 LOC102724428A0A0B4J2F2 783 aa9.11□□□□□ -0.95
LINC00396-201ENST00000411690 SIK1P57059 783 aa9.11□□□□□ -0.95
LINC00396-201ENST00000411690 NKX1-1Q15270 411 aaPredicted RBP9.11□□□□□ -0.95
LINC00396-201ENST00000411690 TRAPPC3LQ5T215 181 aa9.11□□□□□ -0.95
LINC00396-201ENST00000411690 BRCA1P38398 1863 aaKnown RBP9.11□□□□□ -0.95
LINC00396-201ENST00000411690 RAPGEF4Q8WZA2 1011 aa9.1□□□□□ -0.95
LINC00396-201ENST00000411690 WBP1LQ9NX94 342 aa9.1□□□□□ -0.95
LINC00396-201ENST00000411690 CNTNAP1P78357 1384 aa9.1□□□□□ -0.95
LINC00396-201ENST00000411690 PCDH11XQ9BZA7 1347 aa9.09□□□□□ -0.95
LINC00396-201ENST00000411690 PCDH11YQ9BZA8 1340 aa9.09□□□□□ -0.95
LINC00396-201ENST00000411690 TATP17735 454 aaPredicted RBP9.09□□□□□ -0.95
LINC00396-201ENST00000411690 COL9A1P20849 921 aa9.09□□□□□ -0.95
LINC00396-201ENST00000411690 HOXC9P31274 260 aa9.09□□□□□ -0.95
LINC00396-201ENST00000411690 ATP6V1AP38606 617 aa9.09□□□□□ -0.95
LINC00396-201ENST00000411690 AMPHP49418 695 aa9.09□□□□□ -0.95
LINC00396-201ENST00000411690 ANKK1Q8NFD2 765 aa9.09□□□□□ -0.95
LINC00396-201ENST00000411690 PIGBQ92521 554 aa9.09□□□□□ -0.95
LINC00396-201ENST00000411690 RTCBQ9Y3I0 505 aaKnown RBP9.09□□□□□ -0.95
LINC00396-201ENST00000411690 SBNO2Q9Y2G9 1366 aa9.09□□□□□ -0.95
LINC00396-201ENST00000411690 SBF1O95248 1867 aa9.08□□□□□ -0.96
LINC00396-201ENST00000411690 MON2Q7Z3U7 1717 aa9.08□□□□□ -0.96
LINC00396-201ENST00000411690 POTECB2RU33 542 aa9.08□□□□□ -0.96
LINC00396-201ENST00000411690 PPP1R3GB7ZBB8 358 aa9.08□□□□□ -0.96
LINC00396-201ENST00000411690 LMNB1P20700 586 aa9.08□□□□□ -0.96
LINC00396-201ENST00000411690 VEGFBP49765 207 aa9.08□□□□□ -0.96
LINC00396-201ENST00000411690 RASSF7Q02833 373 aa9.08□□□□□ -0.96
LINC00396-201ENST00000411690 ITPK1Q13572 414 aa9.08□□□□□ -0.96
LINC00396-201ENST00000411690 NBPF6Q5VWK0 638 aa9.08□□□□□ -0.96
LINC00396-201ENST00000411690 NBPF4Q96M43 638 aa9.08□□□□□ -0.96
LINC00396-201ENST00000411690 RABGEF1Q9UJ41 708 aa9.08□□□□□ -0.96
LINC00396-201ENST00000411690 C4AP0C0L4 1744 aa9.08□□□□□ -0.96
LINC00396-201ENST00000411690 HSPA8P11142 646 aaKnown RBP9.07□□□□□ -0.96
LINC00396-201ENST00000411690 GYS1P13807 737 aa9.07□□□□□ -0.96
LINC00396-201ENST00000411690 CHRNA5P30532 468 aa9.07□□□□□ -0.96
LINC00396-201ENST00000411690 RFC4P35249 363 aa9.07□□□□□ -0.96
LINC00396-201ENST00000411690 HDGFL2Q7Z4V5 671 aaPredicted RBP9.07□□□□□ -0.96
LINC00396-201ENST00000411690 USHBP1Q8N6Y0 703 aa9.07□□□□□ -0.96
LINC00396-201ENST00000411690 ARHGEF1Q92888 912 aaKnown RBP9.07□□□□□ -0.96
LINC00396-201ENST00000411690 CFAP44Q96MT7 982 aa9.07□□□□□ -0.96
LINC00396-201ENST00000411690 RGPD2P0DJD1 1756 aa9.07□□□□□ -0.96
LINC00396-201ENST00000411690 MAP3K19Q56UN5 1328 aa9.06□□□□□ -0.96
LINC00396-201ENST00000411690 CYP27B1O15528 508 aa9.06□□□□□ -0.96
LINC00396-201ENST00000411690 TMC1Q8TDI8 760 aa9.06□□□□□ -0.96
LINC00396-201ENST00000411690 KDM6AO15550 1401 aaPredicted RBP9.05□□□□□ -0.96
LINC00396-201ENST00000411690 CD163L1Q9NR16 1453 aa9.05□□□□□ -0.96
LINC00396-201ENST00000411690 RAB3GAP2Q9H2M9 1393 aa9.05□□□□□ -0.96
LINC00396-201ENST00000411690 SOWAHBA6NEL2 793 aa9.05□□□□□ -0.96
LINC00396-201ENST00000411690 FBLN1P23142 703 aa9.05□□□□□ -0.96
LINC00396-201ENST00000411690 ASAP1Q9ULH1 1129 aa9.05□□□□□ -0.96
LINC00396-201ENST00000411690 PCDHGA10Q9Y5H3 936 aa9.05□□□□□ -0.96
LINC00396-201ENST00000411690 MAP2P11137 1827 aaKnown RBP9.05□□□□□ -0.96
LINC00396-201ENST00000411690 ITGB4P16144 1822 aa9.05□□□□□ -0.96
LINC00396-201ENST00000411690 EDC4Q6P2E9 1401 aaKnown RBP9.05□□□□□ -0.96
LINC00396-201ENST00000411690 TMEM88BA6NKF7 163 aa9.04□□□□□ -0.96
LINC00396-201ENST00000411690 MAP2K1Q02750 393 aaPredicted RBP9.04□□□□□ -0.96
LINC00396-201ENST00000411690 TMOD3Q9NYL9 352 aa9.04□□□□□ -0.96
LINC00396-201ENST00000411690 RPS6KA4O75676 772 aa9.03□□□□□ -0.96
LINC00396-201ENST00000411690 COG3Q96JB2 828 aa9.03□□□□□ -0.96
LINC00396-201ENST00000411690 SLC12A5Q9H2X9 1139 aa9.03□□□□□ -0.96
LINC00396-201ENST00000411690 TERF2IPQ9NYB0 399 aa9.03□□□□□ -0.96
LINC00396-201ENST00000411690 PASKQ96RG2 1323 aa9.03□□□□□ -0.96
LINC00396-201ENST00000411690 KCNC4Q03721 635 aa9.02□□□□□ -0.97
LINC00396-201ENST00000411690 DEFB115Q30KQ5 88 aa9.02□□□□□ -0.97
LINC00396-201ENST00000411690 RC3H1Q5TC82 1133 aaKnown RBP9.02□□□□□ -0.97
LINC00396-201ENST00000411690 ZFRQ96KR1 1074 aaKnown RBP9.02□□□□□ -0.97
LINC00396-201ENST00000411690 SMG6Q86US8 1419 aaKnown RBP9.02□□□□□ -0.97
LINC00396-201ENST00000411690 VIRMAQ69YN4 1812 aaKnown RBP9.01□□□□□ -0.97
LINC00396-201ENST00000411690 DDR1Q08345 913 aa9.01□□□□□ -0.97
LINC00396-201ENST00000411690 TIAM2Q8IVF5 1701 aa9.01□□□□□ -0.97
LINC00396-201ENST00000411690 BEGAINQ9BUH8 593 aa9.01□□□□□ -0.97
LINC00396-201ENST00000411690 ATG3Q9NT62 314 aa9.01□□□□□ -0.97
LINC00396-201ENST00000411690 WDR33Q9C0J8 1336 aaKnown RBP9.01□□□□□ -0.97
LINC00396-201ENST00000411690 RTL1A6NKG5 1358 aa9□□□□□ -0.97
LINC00396-201ENST00000411690 RASSF10A6NK89 507 aa9□□□□□ -0.97
LINC00396-201ENST00000411690 NFKBIEO00221 500 aa9□□□□□ -0.97
LINC00396-201ENST00000411690 RRS1Q15050 365 aaKnown RBP9□□□□□ -0.97
LINC00396-201ENST00000411690 ERFEQ4G0M1 354 aa9□□□□□ -0.97
LINC00396-201ENST00000411690 LAPTM4BQ86VI4 370 aa9□□□□□ -0.97
LINC00396-201ENST00000411690 LDHDQ86WU2 507 aa9□□□□□ -0.97
LINC00396-201ENST00000411690 TTLL6Q8N841 843 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms