RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 FAM157BP0CG42 384 aa3.85□□□□□ -1.79
RNU2-55P-201ENST00000411146 ADH6P28332 368 aa3.85□□□□□ -1.79
RNU2-55P-201ENST00000411146 TEAD4Q15561 434 aa3.85□□□□□ -1.79
RNU2-55P-201ENST00000411146 ZNF468Q5VIY5 522 aaPredicted RBP3.85□□□□□ -1.79
RNU2-55P-201ENST00000411146 C1orf216Q8TAB5 229 aa3.85□□□□□ -1.79
RNU2-55P-201ENST00000411146 TSPAN10Q9H1Z9 355 aaPredicted RBP3.85□□□□□ -1.79
RNU2-55P-201ENST00000411146 SEMA6BQ9H3T3 888 aa3.85□□□□□ -1.79
RNU2-55P-201ENST00000411146 PRR12Q9ULL5 1215 aa3.85□□□□□ -1.79
RNU2-55P-201ENST00000411146 NOD1Q9Y239 953 aa3.85□□□□□ -1.79
RNU2-55P-201ENST00000411146 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 SFI1A8K8P3 1242 aa3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 USP17L5A8MUK1 530 aa3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 C21orf2O43822 256 aa3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 TATP17735 454 aaPredicted RBP3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 PSME1Q06323 249 aa3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 GRIK4Q16099 956 aa3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 EML3Q32P44 896 aa3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 NBPF1Q3BBV0 1214 aa3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 HDGFL1Q5TGJ6 251 aa3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 TSEN2Q8NCE0 465 aaKnown RBP3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 TPCN2Q8NHX9 752 aa3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 PSMG3-AS1Q96PY0 264 aa3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 PRM3Q9NNZ6 103 aa3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 ZNF232Q9UNY5 417 aa3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 GJA3Q9Y6H8 435 aa3.84□□□□□ -1.79
RNU2-55P-201ENST00000411146 ELOA3CA0A087WX78 387 aaPredicted RBP3.83□□□□□ -1.8
RNU2-55P-201ENST00000411146 ELOA3DA6NLF2 546 aaPredicted RBP3.83□□□□□ -1.8
RNU2-55P-201ENST00000411146 ALBP02768 609 aa3.83□□□□□ -1.8
RNU2-55P-201ENST00000411146 RSPO4Q2I0M5 234 aaPredicted RBP3.83□□□□□ -1.8
RNU2-55P-201ENST00000411146 ELOA3BQ3SY89 546 aa3.83□□□□□ -1.8
RNU2-55P-201ENST00000411146 SAMD5Q5TGI4 173 aa3.83□□□□□ -1.8
RNU2-55P-201ENST00000411146 ELOA3Q8NG57 546 aa3.83□□□□□ -1.8
RNU2-55P-201ENST00000411146 AVENQ9NQS1 362 aaPredicted RBP3.83□□□□□ -1.8
RNU2-55P-201ENST00000411146 SERTM1A2A2V5 107 aa3.82□□□□□ -1.8
RNU2-55P-201ENST00000411146 M0R082 166 aa3.82□□□□□ -1.8
RNU2-55P-201ENST00000411146 PIK3R2O00459 728 aa3.82□□□□□ -1.8
RNU2-55P-201ENST00000411146 BACH1O14867 736 aa3.82□□□□□ -1.8
RNU2-55P-201ENST00000411146 GRNP28799 593 aaKnown RBP3.82□□□□□ -1.8
RNU2-55P-201ENST00000411146 CCDC102BQ68D86 513 aa3.82□□□□□ -1.8
RNU2-55P-201ENST00000411146 C20orf204Q6ZNR8 217 aa3.82□□□□□ -1.8
RNU2-55P-201ENST00000411146 MICALL1Q8N3F8 863 aa3.82□□□□□ -1.8
RNU2-55P-201ENST00000411146 ZNF417Q8TAU3 575 aa3.82□□□□□ -1.8
RNU2-55P-201ENST00000411146 ZNF587Q96SQ5 575 aaPredicted RBP3.82□□□□□ -1.8
RNU2-55P-201ENST00000411146 PHACTR1Q9C0D0 580 aa3.82□□□□□ -1.8
RNU2-55P-201ENST00000411146 TPSG1Q9NRR2 321 aa3.82□□□□□ -1.8
RNU2-55P-201ENST00000411146 NOP53Q9NZM5 478 aaKnown RBP3.82□□□□□ -1.8
RNU2-55P-201ENST00000411146 USP17L3A6NCW0 530 aa3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 USP17L4A6NCW7 530 aa3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 NID1P14543 1247 aa3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 SOX11P35716 441 aa3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 GATA4P43694 442 aa3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 PLAURQ03405 335 aa3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 SPEM2Q0P670 501 aa3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 NKAPLQ5M9Q1 402 aa3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 USP17L2Q6R6M4 530 aa3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 USP17L1Q7RTZ2 530 aa3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 OGFOD1Q8N543 542 aa3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 ZNF594Q96JF6 807 aaPredicted RBP3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 SUSD3Q96L08 255 aa3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 CEP63Q96MT8 703 aa3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 MKRN1Q9UHC7 482 aaKnown RBP3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 BCS1LQ9Y276 419 aa3.81□□□□□ -1.8
RNU2-55P-201ENST00000411146 ADARB2-AS1A8MUL3 147 aa3.8□□□□□ -1.8
RNU2-55P-201ENST00000411146 SIN3BO75182 1162 aa3.8□□□□□ -1.8
RNU2-55P-201ENST00000411146 SHISA2Q6UWI4 295 aa3.8□□□□□ -1.8
RNU2-55P-201ENST00000411146 NFATC2IPQ8NCF5 419 aa3.8□□□□□ -1.8
RNU2-55P-201ENST00000411146 RHPN1Q8TCX5 695 aa3.8□□□□□ -1.8
RNU2-55P-201ENST00000411146 CLUAP1Q96AJ1 413 aa3.8□□□□□ -1.8
RNU2-55P-201ENST00000411146 IGFLR1Q9H665 355 aa3.8□□□□□ -1.8
RNU2-55P-201ENST00000411146 BRD7Q9NPI1 651 aa3.8□□□□□ -1.8
RNU2-55P-201ENST00000411146 ATAD2Q6PL18 1390 aa3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 PPP1R12BO60237 982 aaPredicted RBP3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 SPATA31C1P0DKV0 1188 aa3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 SELPP16109 830 aa3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 ADH7P40394 386 aa3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 TYRO3Q06418 890 aa3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 LAMC2Q13753 1193 aa3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 ZMYM1Q5SVZ6 1142 aa3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 POTEAQ6S8J7 498 aa3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 ALDH16A1Q8IZ83 802 aa3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 CHMP7Q8WUX9 453 aaPredicted RBP3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 NUDT8Q8WV74 236 aa3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 TNFRSF25Q93038 417 aa3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 BHMTQ93088 406 aa3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 NGLY1Q96IV0 654 aa3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 NEUROD4Q9HD90 331 aa3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 TFIP11Q9UBB9 837 aaKnown RBP3.79□□□□□ -1.8
RNU2-55P-201ENST00000411146 ATP9BO43861 1147 aa3.78□□□□□ -1.8
RNU2-55P-201ENST00000411146 LZTS3O60299 673 aaPredicted RBP3.78□□□□□ -1.8
RNU2-55P-201ENST00000411146 ALAS2P22557 587 aa3.78□□□□□ -1.8
RNU2-55P-201ENST00000411146 TBC1D8BQ0IIM8 1120 aa3.78□□□□□ -1.8
RNU2-55P-201ENST00000411146 ILDR2Q71H61 639 aa3.78□□□□□ -1.8
RNU2-55P-201ENST00000411146 PLEKHM2Q8IWE5 1019 aa3.78□□□□□ -1.8
RNU2-55P-201ENST00000411146 SCG3Q8WXD2 468 aaKnown RBP3.78□□□□□ -1.8
RNU2-55P-201ENST00000411146 DMGDHQ9UI17 866 aaKnown RBP3.78□□□□□ -1.8
RNU2-55P-201ENST00000411146 NAGPAQ9UK23 515 aa3.78□□□□□ -1.8
RNU2-55P-201ENST00000411146 KCNH4Q9UQ05 1017 aa3.78□□□□□ -1.8
RNU2-55P-201ENST00000411146 USP20Q9Y2K6 914 aa3.78□□□□□ -1.8
RNU2-55P-201ENST00000411146 ZBTB42B2RXF5 422 aa3.77□□□□□ -1.81
RNU2-55P-201ENST00000411146 DYRK3O43781 588 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms