RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 IKBKGQ9Y6K9 419 aa12.96□□□□□ -0.33
PRPF40A-202ENST00000410080 NCBP1Q09161 790 aaKnown RBP12.96□□□□□ -0.33
PRPF40A-202ENST00000410080 TTC21AQ8NDW8 1320 aa12.96□□□□□ -0.33
PRPF40A-202ENST00000410080 UQCRHLA0A096LP55 91 aa12.96□□□□□ -0.33
PRPF40A-202ENST00000410080 VEZTQ9HBM0 779 aa12.96□□□□□ -0.34
PRPF40A-202ENST00000410080 KRT32Q14532 448 aa12.96□□□□□ -0.34
PRPF40A-202ENST00000410080 EXOC5O00471 708 aa12.96□□□□□ -0.34
PRPF40A-202ENST00000410080 CHD1LQ86WJ1 897 aa12.96□□□□□ -0.34
PRPF40A-202ENST00000410080 TAOK3Q9H2K8 898 aa12.96□□□□□ -0.34
PRPF40A-202ENST00000410080 DAPK1P53355 1430 aa12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 CCDC194A0A1B0GVG4 234 aa12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 BIRC2Q13490 618 aa12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 C8orf37Q96NL8 207 aa12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 IFIT3O14879 490 aaKnown RBP12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 NBPF8Q3BBV2 869 aa12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 TIGD1Q96MW7 591 aa12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 ZNF408Q9H9D4 720 aa12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 PICALMQ13492 652 aa12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 OGFOD1Q8N543 542 aa12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 PAIP2Q9BPZ3 127 aaKnown RBP12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 CCDC196A0A1B0GTZ2 297 aa12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 FAM135AQ9P2D6 1515 aa12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 TSPY2A6NKD2 308 aa12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 BEGAINQ9BUH8 593 aa12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 PSMC4P43686 418 aa12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 CEBPAP49715 358 aaPredicted RBP12.95□□□□□ -0.34
PRPF40A-202ENST00000410080 KIF14Q15058 1648 aa12.94□□□□□ -0.34
PRPF40A-202ENST00000410080 BAG3O95817 575 aa12.94□□□□□ -0.34
PRPF40A-202ENST00000410080 HLTFQ14527 1009 aaKnown RBP eCLIP12.94□□□□□ -0.342e-7■■□□□ 14.1
PRPF40A-202ENST00000410080 KAT14Q9H8E8 782 aa12.94□□□□□ -0.34
PRPF40A-202ENST00000410080 FSD2A1L4K1 749 aa12.94□□□□□ -0.34
PRPF40A-202ENST00000410080 CCT2P78371 535 aaKnown RBP12.94□□□□□ -0.34
PRPF40A-202ENST00000410080 LMOD1P29536 600 aaPredicted RBP12.94□□□□□ -0.34
PRPF40A-202ENST00000410080 MTIF2P46199 727 aaKnown RBP12.94□□□□□ -0.34
PRPF40A-202ENST00000410080 MRE11P49959 708 aa12.94□□□□□ -0.34
PRPF40A-202ENST00000410080 EXOC6BQ9Y2D4 811 aa12.94□□□□□ -0.34
PRPF40A-202ENST00000410080 TOPBP1Q92547 1522 aa12.94□□□□□ -0.34
PRPF40A-202ENST00000410080 MVPQ14764 893 aaKnown RBP12.94□□□□□ -0.34
PRPF40A-202ENST00000410080 SPECC1Q5M775 1068 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 AKNAD1Q5T1N1 836 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 SREK1Q8WXA9 508 aaKnown RBP12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 C8orf76Q96K31 380 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 KIF5CO60282 957 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 ACTN2P35609 894 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 SLC52A1Q9NWF4 448 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 EFCAB5A4FU69 1503 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 TSPOAP1O95153 1857 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 ISM2Q6H9L7 571 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 NDC80O14777 642 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 SLU7O95391 586 aaKnown RBP12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 CCDC40Q4G0X9 1142 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 DUSP27Q5VZP5 1158 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 CPLX3Q8WVH0 158 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 A0A1W2PRG0 241 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 NBPF6Q5VWK0 638 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 STXBP4Q6ZWJ1 553 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 NBPF5PQ86XG9 351 aaPredicted RBP12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 CCDC83Q8IWF9 413 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 NBPF4Q96M43 638 aa12.93□□□□□ -0.34
PRPF40A-202ENST00000410080 SPATA24Q86W54 205 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 AAMPQ13685 434 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 BMS1Q14692 1282 aaKnown RBP12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 PDE4BQ07343 736 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 HDAC9Q9UKV0 1011 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 GOLGA8BA8MQT2 603 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 TMEM110-MUSTN1A8MSY1 372 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 STX6O43752 255 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 TBC1D5Q92609 795 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 K7ELQ4 463 aaPredicted RBP12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 KCNH5Q8NCM2 988 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 HFM1A2PYH4 1435 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 TSPY3P0CV98 308 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 TSPY8P0CW00 308 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 TMEM57Q8N5G2 664 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 ZBTB21Q9ULJ3 1066 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 ALS2CR12Q96Q35 445 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 GJA3Q9Y6H8 435 aa12.92□□□□□ -0.34
PRPF40A-202ENST00000410080 CALM1P0DP23 149 aa12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 CALM2P0DP24 149 aa12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 CALM3P0DP25 149 aa12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 GJC1P36383 396 aa12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 RNF187Q5TA31 235 aaPredicted RBP12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 NME9Q86XW9 330 aa12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 CNNM3Q8NE01 707 aa12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 CDC5LQ99459 802 aaKnown RBP12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 TCP11L1Q9NUJ3 509 aa12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 POLD1P28340 1107 aa12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 CCDC117Q8IWD4 279 aaPredicted RBP12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 FOXO3O43524 673 aa12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 MAP9Q49MG5 647 aa12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 CCDC63Q8NA47 563 aa12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 NFE2L2Q16236 605 aa12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 TIAM1Q13009 1591 aa12.91□□□□□ -0.34
PRPF40A-202ENST00000410080 WDR63Q8IWG1 891 aa12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 SPOUT1Q5T280 376 aaKnown RBP12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 HAUS7Q99871 368 aa12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 SHTN1A0MZ66 631 aa12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 USO1O60763 962 aaKnown RBP12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 IDEP14735 1019 aa12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 SP4Q02446 784 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms